Strain Fitness in Escherichia coli BL21 around ECD_04269

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_04268 and ECD_04269 are separated by 89 nucleotidesECD_04269 and ECD_04270 are separated by 84 nucleotidesECD_04270 and ECD_04271 are separated by 51 nucleotides ECD_04268: ECD_04268 - lytic murein transglycosylase, soluble, at 4,548,087 to 4,550,024 _04268 ECD_04269: ECD_04269 - transcriptional repressor, tryptophan-binding, at 4,550,114 to 4,550,440 _04269 ECD_04270: ECD_04270 - non-canonical purine NTP phosphatase, ITPase/XTPase, at 4,550,525 to 4,551,046 _04270 ECD_04271: ECD_04271 - phosphatase, at 4,551,098 to 4,551,745 _04271 Position (kb) 4550 4551Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4549.151 kb on - strand, within ECD_04268at 4549.258 kb on - strand, within ECD_04268at 4549.275 kb on - strand, within ECD_04268at 4549.524 kb on + strand, within ECD_04268at 4549.525 kb on - strand, within ECD_04268at 4549.545 kb on + strand, within ECD_04268at 4549.545 kb on + strand, within ECD_04268at 4549.546 kb on - strand, within ECD_04268at 4549.658 kb on + strand, within ECD_04268at 4549.659 kb on - strand, within ECD_04268at 4549.667 kb on + strand, within ECD_04268at 4549.668 kb on - strand, within ECD_04268at 4549.679 kb on + strand, within ECD_04268at 4549.709 kb on + strand, within ECD_04268at 4549.709 kb on + strand, within ECD_04268at 4549.710 kb on - strand, within ECD_04268at 4549.710 kb on - strand, within ECD_04268at 4549.764 kb on + strand, within ECD_04268at 4549.774 kb on - strand, within ECD_04268at 4549.774 kb on - strand, within ECD_04268at 4549.803 kb on - strand, within ECD_04268at 4549.822 kb on - strand, within ECD_04268at 4549.901 kb on + strandat 4549.926 kb on + strandat 4549.927 kb on - strandat 4549.927 kb on - strandat 4549.931 kb on - strandat 4549.948 kb on - strandat 4549.956 kb on + strandat 4549.957 kb on - strandat 4549.957 kb on - strandat 4549.957 kb on - strandat 4549.957 kb on - strandat 4549.959 kb on + strandat 4549.959 kb on + strandat 4550.035 kb on + strandat 4550.036 kb on - strandat 4550.040 kb on + strandat 4550.041 kb on - strandat 4550.045 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.111 kb on - strandat 4550.111 kb on - strandat 4550.111 kb on - strandat 4550.113 kb on + strandat 4550.113 kb on + strandat 4550.191 kb on + strand, within ECD_04269at 4550.191 kb on + strand, within ECD_04269at 4550.220 kb on + strand, within ECD_04269at 4550.229 kb on + strand, within ECD_04269at 4550.230 kb on - strand, within ECD_04269at 4550.538 kb on + strandat 4550.540 kb on + strandat 4550.540 kb on + strandat 4550.540 kb on + strandat 4550.541 kb on - strandat 4550.666 kb on - strand, within ECD_04270at 4550.666 kb on - strand, within ECD_04270at 4550.741 kb on - strand, within ECD_04270at 4550.953 kb on + strand, within ECD_04270at 4551.047 kb on - strandat 4551.075 kb on - strandat 4551.075 kb on - strandat 4551.083 kb on - strandat 4551.083 kb on - strandat 4551.102 kb on + strandat 4551.103 kb on - strandat 4551.108 kb on + strandat 4551.109 kb on - strandat 4551.110 kb on + strandat 4551.110 kb on + strandat 4551.110 kb on + strandat 4551.110 kb on + strandat 4551.110 kb on + strandat 4551.110 kb on + strandat 4551.111 kb on - strandat 4551.111 kb on - strandat 4551.114 kb on + strandat 4551.114 kb on + strandat 4551.114 kb on + strandat 4551.115 kb on - strandat 4551.115 kb on - strandat 4551.115 kb on - strandat 4551.154 kb on + strandat 4551.247 kb on + strand, within ECD_04271at 4551.248 kb on - strand, within ECD_04271at 4551.345 kb on + strand, within ECD_04271at 4551.345 kb on + strand, within ECD_04271at 4551.345 kb on + strand, within ECD_04271at 4551.345 kb on + strand, within ECD_04271at 4551.346 kb on - strand, within ECD_04271at 4551.373 kb on + strand, within ECD_04271

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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4,549,151 - ECD_04268 0.55 -0.5
4,549,258 - ECD_04268 0.60 -2.1
4,549,275 - ECD_04268 0.61 -0.3
4,549,524 + ECD_04268 0.74 +1.2
4,549,525 - ECD_04268 0.74 +0.7
4,549,545 + ECD_04268 0.75 -1.5
4,549,545 + ECD_04268 0.75 -0.4
4,549,546 - ECD_04268 0.75 +0.3
4,549,658 + ECD_04268 0.81 -1.0
4,549,659 - ECD_04268 0.81 +0.1
4,549,667 + ECD_04268 0.82 +0.2
4,549,668 - ECD_04268 0.82 -0.2
4,549,679 + ECD_04268 0.82 -1.3
4,549,709 + ECD_04268 0.84 -0.3
4,549,709 + ECD_04268 0.84 -1.6
4,549,710 - ECD_04268 0.84 +0.3
4,549,710 - ECD_04268 0.84 +0.3
4,549,764 + ECD_04268 0.87 +0.2
4,549,774 - ECD_04268 0.87 +0.4
4,549,774 - ECD_04268 0.87 -1.8
4,549,803 - ECD_04268 0.89 +0.9
4,549,822 - ECD_04268 0.90 +0.6
4,549,901 + -2.4
4,549,926 + -0.2
4,549,927 - -1.9
4,549,927 - -0.7
4,549,931 - -0.2
4,549,948 - -1.5
4,549,956 + -2.4
4,549,957 - +0.2
4,549,957 - +0.6
4,549,957 - +0.4
4,549,957 - -1.7
4,549,959 + -1.2
4,549,959 + -1.6
4,550,035 + -0.8
4,550,036 - -0.9
4,550,040 + -0.7
4,550,041 - +0.8
4,550,045 + -1.5
4,550,110 + -0.7
4,550,110 + -0.0
4,550,110 + +0.3
4,550,110 + -2.0
4,550,110 + -0.2
4,550,110 + +0.5
4,550,110 + -1.5
4,550,110 + -1.1
4,550,111 - -0.5
4,550,111 - +0.8
4,550,111 - +0.1
4,550,113 + -1.0
4,550,113 + -1.7
4,550,191 + ECD_04269 0.24 +0.6
4,550,191 + ECD_04269 0.24 -0.6
4,550,220 + ECD_04269 0.32 -0.6
4,550,229 + ECD_04269 0.35 -0.8
4,550,230 - ECD_04269 0.35 -0.5
4,550,538 + +0.3
4,550,540 + -3.3
4,550,540 + +2.1
4,550,540 + +1.2
4,550,541 - +0.6
4,550,666 - ECD_04270 0.27 +0.2
4,550,666 - ECD_04270 0.27 +0.7
4,550,741 - ECD_04270 0.41 -0.7
4,550,953 + ECD_04270 0.82 -0.9
4,551,047 - -3.0
4,551,075 - +1.7
4,551,075 - +0.2
4,551,083 - -0.7
4,551,083 - -0.8
4,551,102 + +1.1
4,551,103 - +0.4
4,551,108 + -0.7
4,551,109 - +0.0
4,551,110 + -0.2
4,551,110 + -0.3
4,551,110 + +0.1
4,551,110 + -0.5
4,551,110 + +0.1
4,551,110 + -0.0
4,551,111 - -0.7
4,551,111 - -0.3
4,551,114 + -0.3
4,551,114 + -0.0
4,551,114 + -0.2
4,551,115 - -0.8
4,551,115 - -0.2
4,551,115 - -0.4
4,551,154 + +0.2
4,551,247 + ECD_04271 0.23 +2.1
4,551,248 - ECD_04271 0.23 -1.2
4,551,345 + ECD_04271 0.38 +2.5
4,551,345 + ECD_04271 0.38 -0.4
4,551,345 + ECD_04271 0.38 +0.9
4,551,345 + ECD_04271 0.38 -3.3
4,551,346 - ECD_04271 0.38 -0.5
4,551,373 + ECD_04271 0.42 -0.3

Or see this region's nucleotide sequence