Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04153 and ECD_04154 are separated by 0 nucleotides ECD_04154 and ECD_04155 overlap by 4 nucleotides ECD_04155 and ECD_04156 overlap by 4 nucleotides ECD_04156 and ECD_04157 are separated by 44 nucleotides
ECD_04153: ECD_04153 - ferric citrate ABC transporter ATPase, at 4,424,087 to 4,424,854
_04153
ECD_04154: ECD_04154 - ferric citrate ABC transporter permease, at 4,424,855 to 4,425,811
_04154
ECD_04155: ECD_04155 - ferric citrate ABC transporter permease, at 4,425,808 to 4,426,806
_04155
ECD_04156: ECD_04156 - ferric citrate ABC transporter periplasmic binding protein, at 4,426,803 to 4,427,705
_04156
ECD_04157: ECD_04157 - TonB-dependent outer membrane ferric citrate transporter and signal transducer; ferric citrate extracelluar receptor; FecR-interacting protein, at 4,427,750 to 4,430,074
_04157
Position (kb)
4425
4426
4427 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4424.944 kb on + strand at 4424.944 kb on + strand at 4424.944 kb on + strand at 4424.945 kb on - strand at 4424.945 kb on - strand at 4425.046 kb on + strand, within ECD_04154 at 4425.047 kb on - strand, within ECD_04154 at 4425.101 kb on - strand, within ECD_04154 at 4425.120 kb on - strand, within ECD_04154 at 4425.120 kb on - strand, within ECD_04154 at 4425.123 kb on - strand, within ECD_04154 at 4425.288 kb on - strand, within ECD_04154 at 4425.440 kb on + strand, within ECD_04154 at 4425.505 kb on + strand, within ECD_04154 at 4425.512 kb on + strand, within ECD_04154 at 4425.512 kb on + strand, within ECD_04154 at 4425.513 kb on - strand, within ECD_04154 at 4425.674 kb on + strand, within ECD_04154 at 4425.674 kb on + strand, within ECD_04154 at 4425.675 kb on - strand, within ECD_04154 at 4425.678 kb on + strand, within ECD_04154 at 4425.678 kb on + strand, within ECD_04154 at 4425.678 kb on + strand, within ECD_04154 at 4425.678 kb on + strand, within ECD_04154 at 4425.678 kb on + strand, within ECD_04154 at 4425.678 kb on + strand, within ECD_04154 at 4425.678 kb on + strand, within ECD_04154 at 4425.679 kb on - strand, within ECD_04154 at 4425.679 kb on - strand, within ECD_04154 at 4425.679 kb on - strand, within ECD_04154 at 4425.681 kb on + strand, within ECD_04154 at 4425.681 kb on + strand, within ECD_04154 at 4425.681 kb on + strand, within ECD_04154 at 4425.682 kb on - strand, within ECD_04154 at 4425.755 kb on + strand at 4425.793 kb on + strand at 4425.910 kb on + strand, within ECD_04155 at 4425.911 kb on - strand, within ECD_04155 at 4425.962 kb on - strand, within ECD_04155 at 4426.073 kb on - strand, within ECD_04155 at 4426.077 kb on + strand, within ECD_04155 at 4426.077 kb on + strand, within ECD_04155 at 4426.077 kb on + strand, within ECD_04155 at 4426.077 kb on + strand, within ECD_04155 at 4426.077 kb on + strand, within ECD_04155 at 4426.078 kb on - strand, within ECD_04155 at 4426.078 kb on - strand, within ECD_04155 at 4426.078 kb on - strand, within ECD_04155 at 4426.078 kb on - strand, within ECD_04155 at 4426.078 kb on - strand, within ECD_04155 at 4426.093 kb on + strand, within ECD_04155 at 4426.120 kb on - strand, within ECD_04155 at 4426.271 kb on + strand, within ECD_04155 at 4426.318 kb on - strand, within ECD_04155 at 4426.318 kb on - strand, within ECD_04155 at 4426.451 kb on + strand, within ECD_04155 at 4426.485 kb on + strand, within ECD_04155 at 4426.515 kb on + strand, within ECD_04155 at 4426.752 kb on + strand at 4426.752 kb on + strand at 4426.752 kb on + strand at 4427.226 kb on - strand, within ECD_04156 at 4427.226 kb on - strand, within ECD_04156 at 4427.226 kb on - strand, within ECD_04156 at 4427.327 kb on + strand, within ECD_04156 at 4427.365 kb on + strand, within ECD_04156 at 4427.365 kb on + strand, within ECD_04156 at 4427.526 kb on - strand, within ECD_04156 at 4427.613 kb on - strand, within ECD_04156 at 4427.705 kb on + strand at 4427.705 kb on + strand at 4427.705 kb on + strand at 4427.706 kb on - strand at 4427.706 kb on - strand at 4427.706 kb on - strand at 4427.721 kb on - strand at 4427.773 kb on + strand at 4427.773 kb on + strand at 4427.775 kb on + strand at 4427.775 kb on + strand at 4427.775 kb on + strand at 4427.776 kb on - strand at 4427.776 kb on - strand at 4427.799 kb on + strand at 4427.799 kb on + strand at 4427.800 kb on - strand at 4427.800 kb on - strand at 4427.800 kb on - strand at 4427.800 kb on - strand at 4427.800 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 4,424,944 + +1.5 4,424,944 + +0.9 4,424,944 + +0.8 4,424,945 - -0.1 4,424,945 - -0.2 4,425,046 + ECD_04154 0.20 -0.5 4,425,047 - ECD_04154 0.20 -0.0 4,425,101 - ECD_04154 0.26 +1.2 4,425,120 - ECD_04154 0.28 +0.4 4,425,120 - ECD_04154 0.28 +0.1 4,425,123 - ECD_04154 0.28 -0.7 4,425,288 - ECD_04154 0.45 +0.1 4,425,440 + ECD_04154 0.61 -1.9 4,425,505 + ECD_04154 0.68 +0.1 4,425,512 + ECD_04154 0.69 -0.0 4,425,512 + ECD_04154 0.69 -1.1 4,425,513 - ECD_04154 0.69 -0.2 4,425,674 + ECD_04154 0.86 -1.4 4,425,674 + ECD_04154 0.86 -3.0 4,425,675 - ECD_04154 0.86 -0.9 4,425,678 + ECD_04154 0.86 +0.4 4,425,678 + ECD_04154 0.86 +0.1 4,425,678 + ECD_04154 0.86 -0.9 4,425,678 + ECD_04154 0.86 -0.9 4,425,678 + ECD_04154 0.86 -0.6 4,425,678 + ECD_04154 0.86 -0.7 4,425,678 + ECD_04154 0.86 -0.3 4,425,679 - ECD_04154 0.86 -0.4 4,425,679 - ECD_04154 0.86 +0.2 4,425,679 - ECD_04154 0.86 -0.5 4,425,681 + ECD_04154 0.86 +0.4 4,425,681 + ECD_04154 0.86 +0.8 4,425,681 + ECD_04154 0.86 +0.8 4,425,682 - ECD_04154 0.86 +0.3 4,425,755 + -1.1 4,425,793 + -1.1 4,425,910 + ECD_04155 0.10 -1.6 4,425,911 - ECD_04155 0.10 -0.2 4,425,962 - ECD_04155 0.15 -0.9 4,426,073 - ECD_04155 0.27 -0.3 4,426,077 + ECD_04155 0.27 -1.7 4,426,077 + ECD_04155 0.27 -0.5 4,426,077 + ECD_04155 0.27 +0.6 4,426,077 + ECD_04155 0.27 -0.4 4,426,077 + ECD_04155 0.27 +1.3 4,426,078 - ECD_04155 0.27 -2.1 4,426,078 - ECD_04155 0.27 -0.8 4,426,078 - ECD_04155 0.27 -1.7 4,426,078 - ECD_04155 0.27 +1.6 4,426,078 - ECD_04155 0.27 -0.6 4,426,093 + ECD_04155 0.29 +0.0 4,426,120 - ECD_04155 0.31 -2.3 4,426,271 + ECD_04155 0.46 -0.2 4,426,318 - ECD_04155 0.51 +0.2 4,426,318 - ECD_04155 0.51 -1.1 4,426,451 + ECD_04155 0.64 +0.4 4,426,485 + ECD_04155 0.68 -0.4 4,426,515 + ECD_04155 0.71 +0.5 4,426,752 + -0.2 4,426,752 + -0.2 4,426,752 + +1.2 4,427,226 - ECD_04156 0.47 -0.0 4,427,226 - ECD_04156 0.47 -0.5 4,427,226 - ECD_04156 0.47 +1.5 4,427,327 + ECD_04156 0.58 -1.1 4,427,365 + ECD_04156 0.62 -0.8 4,427,365 + ECD_04156 0.62 -2.2 4,427,526 - ECD_04156 0.80 +1.8 4,427,613 - ECD_04156 0.90 +0.1 4,427,705 + -1.3 4,427,705 + -0.3 4,427,705 + -0.6 4,427,706 - -0.4 4,427,706 - -0.0 4,427,706 - -0.4 4,427,721 - -1.1 4,427,773 + -0.2 4,427,773 + +0.4 4,427,775 + -1.8 4,427,775 + +0.1 4,427,775 + +0.3 4,427,776 - +0.3 4,427,776 - -0.6 4,427,799 + -0.7 4,427,799 + +0.3 4,427,800 - -1.1 4,427,800 - +0.4 4,427,800 - -0.2 4,427,800 - +0.1 4,427,800 - +0.4
Or see this region's nucleotide sequence