Strain Fitness in Escherichia coli BL21 around ECD_03908

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03907 and ECD_03908 are separated by 71 nucleotidesECD_03908 and ECD_03909 are separated by 242 nucleotides ECD_03907: ECD_03907 - maltose ABC transporter ATPase, at 4,154,156 to 4,155,271 _03907 ECD_03908: ECD_03908 - maltose outer membrane porin (maltoporin), at 4,155,343 to 4,156,683 _03908 ECD_03909: ECD_03909 - maltose regulon periplasmic protein, at 4,156,926 to 4,157,846 _03909 Position (kb) 4155 4156 4157Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8at 4154.389 kb on + strand, within ECD_03907at 4154.389 kb on + strand, within ECD_03907at 4154.406 kb on - strand, within ECD_03907at 4154.406 kb on - strand, within ECD_03907at 4154.517 kb on + strand, within ECD_03907at 4154.617 kb on - strand, within ECD_03907at 4154.720 kb on + strand, within ECD_03907at 4154.721 kb on - strand, within ECD_03907at 4154.819 kb on + strand, within ECD_03907at 4155.025 kb on - strand, within ECD_03907at 4155.140 kb on + strand, within ECD_03907at 4155.141 kb on - strand, within ECD_03907at 4155.165 kb on + strandat 4155.339 kb on + strandat 4155.340 kb on - strandat 4155.395 kb on + strandat 4155.395 kb on + strandat 4155.493 kb on - strand, within ECD_03908at 4155.507 kb on + strand, within ECD_03908at 4155.507 kb on + strand, within ECD_03908at 4155.508 kb on - strand, within ECD_03908at 4155.538 kb on + strand, within ECD_03908at 4155.539 kb on - strand, within ECD_03908at 4155.592 kb on + strand, within ECD_03908at 4155.603 kb on + strand, within ECD_03908at 4155.604 kb on - strand, within ECD_03908at 4155.604 kb on - strand, within ECD_03908at 4155.613 kb on + strand, within ECD_03908at 4155.613 kb on + strand, within ECD_03908at 4155.726 kb on + strand, within ECD_03908at 4155.727 kb on - strand, within ECD_03908at 4155.736 kb on + strand, within ECD_03908at 4155.757 kb on - strand, within ECD_03908at 4155.757 kb on - strand, within ECD_03908at 4155.771 kb on - strand, within ECD_03908at 4155.894 kb on + strand, within ECD_03908at 4155.894 kb on + strand, within ECD_03908at 4155.895 kb on - strand, within ECD_03908at 4155.895 kb on - strand, within ECD_03908at 4155.895 kb on - strand, within ECD_03908at 4155.895 kb on - strand, within ECD_03908at 4155.898 kb on + strand, within ECD_03908at 4155.898 kb on + strand, within ECD_03908at 4155.898 kb on + strand, within ECD_03908at 4155.899 kb on - strand, within ECD_03908at 4155.899 kb on - strand, within ECD_03908at 4155.905 kb on - strand, within ECD_03908at 4155.977 kb on + strand, within ECD_03908at 4155.977 kb on + strand, within ECD_03908at 4155.977 kb on + strand, within ECD_03908at 4155.978 kb on - strand, within ECD_03908at 4155.978 kb on - strand, within ECD_03908at 4156.022 kb on - strand, within ECD_03908at 4156.074 kb on + strand, within ECD_03908at 4156.117 kb on + strand, within ECD_03908at 4156.279 kb on + strand, within ECD_03908at 4156.279 kb on + strand, within ECD_03908at 4156.279 kb on + strand, within ECD_03908at 4156.280 kb on - strand, within ECD_03908at 4156.280 kb on - strand, within ECD_03908at 4156.280 kb on - strand, within ECD_03908at 4156.280 kb on - strand, within ECD_03908at 4156.280 kb on - strand, within ECD_03908at 4156.280 kb on - strand, within ECD_03908at 4156.287 kb on + strand, within ECD_03908at 4156.288 kb on - strand, within ECD_03908at 4156.288 kb on - strand, within ECD_03908at 4156.291 kb on + strand, within ECD_03908at 4156.291 kb on + strand, within ECD_03908at 4156.291 kb on + strand, within ECD_03908at 4156.292 kb on - strand, within ECD_03908at 4156.292 kb on - strand, within ECD_03908at 4156.292 kb on - strand, within ECD_03908at 4156.292 kb on - strand, within ECD_03908at 4156.357 kb on + strand, within ECD_03908at 4156.358 kb on - strand, within ECD_03908at 4156.522 kb on + strand, within ECD_03908at 4156.555 kb on + strandat 4156.556 kb on - strandat 4156.572 kb on + strandat 4156.573 kb on - strandat 4156.681 kb on + strandat 4156.684 kb on + strandat 4156.758 kb on + strandat 4156.767 kb on + strandat 4156.768 kb on - strandat 4156.768 kb on - strandat 4156.804 kb on - strandat 4156.994 kb on + strandat 4157.009 kb on + strandat 4157.010 kb on - strandat 4157.010 kb on - strandat 4157.010 kb on - strandat 4157.013 kb on + strandat 4157.013 kb on + strandat 4157.013 kb on + strandat 4157.014 kb on - strandat 4157.014 kb on - strandat 4157.014 kb on - strandat 4157.172 kb on + strand, within ECD_03909at 4157.466 kb on + strand, within ECD_03909at 4157.466 kb on + strand, within ECD_03909at 4157.466 kb on + strand, within ECD_03909at 4157.522 kb on + strand, within ECD_03909at 4157.522 kb on + strand, within ECD_03909at 4157.581 kb on + strand, within ECD_03909at 4157.590 kb on + strand, within ECD_03909at 4157.591 kb on - strand, within ECD_03909

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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4,154,389 + ECD_03907 0.21 +6.2
4,154,389 + ECD_03907 0.21 +5.9
4,154,406 - ECD_03907 0.22 +6.5
4,154,406 - ECD_03907 0.22 +5.8
4,154,517 + ECD_03907 0.32 +3.9
4,154,617 - ECD_03907 0.41 +4.2
4,154,720 + ECD_03907 0.51 -0.6
4,154,721 - ECD_03907 0.51 +6.1
4,154,819 + ECD_03907 0.59 +0.2
4,155,025 - ECD_03907 0.78 +6.5
4,155,140 + ECD_03907 0.88 -0.2
4,155,141 - ECD_03907 0.88 +6.3
4,155,165 + -0.0
4,155,339 + +6.6
4,155,340 - +6.3
4,155,395 + +6.8
4,155,395 + +6.4
4,155,493 - ECD_03908 0.11 +6.9
4,155,507 + ECD_03908 0.12 +6.3
4,155,507 + ECD_03908 0.12 +6.6
4,155,508 - ECD_03908 0.12 +6.6
4,155,538 + ECD_03908 0.15 +6.2
4,155,539 - ECD_03908 0.15 +6.9
4,155,592 + ECD_03908 0.19 +6.7
4,155,603 + ECD_03908 0.19 +6.4
4,155,604 - ECD_03908 0.19 +6.5
4,155,604 - ECD_03908 0.19 +6.7
4,155,613 + ECD_03908 0.20 +6.1
4,155,613 + ECD_03908 0.20 +6.5
4,155,726 + ECD_03908 0.29 +6.0
4,155,727 - ECD_03908 0.29 +7.1
4,155,736 + ECD_03908 0.29 +6.5
4,155,757 - ECD_03908 0.31 +6.2
4,155,757 - ECD_03908 0.31 +6.2
4,155,771 - ECD_03908 0.32 +6.7
4,155,894 + ECD_03908 0.41 +6.5
4,155,894 + ECD_03908 0.41 +6.3
4,155,895 - ECD_03908 0.41 +6.0
4,155,895 - ECD_03908 0.41 +7.5
4,155,895 - ECD_03908 0.41 +7.0
4,155,895 - ECD_03908 0.41 +6.3
4,155,898 + ECD_03908 0.41 +6.3
4,155,898 + ECD_03908 0.41 +5.8
4,155,898 + ECD_03908 0.41 +6.4
4,155,899 - ECD_03908 0.41 +6.5
4,155,899 - ECD_03908 0.41 +6.8
4,155,905 - ECD_03908 0.42 +5.9
4,155,977 + ECD_03908 0.47 +6.7
4,155,977 + ECD_03908 0.47 +6.5
4,155,977 + ECD_03908 0.47 +6.4
4,155,978 - ECD_03908 0.47 +7.0
4,155,978 - ECD_03908 0.47 +6.4
4,156,022 - ECD_03908 0.51 +6.1
4,156,074 + ECD_03908 0.55 +6.4
4,156,117 + ECD_03908 0.58 +6.5
4,156,279 + ECD_03908 0.70 +6.2
4,156,279 + ECD_03908 0.70 +6.9
4,156,279 + ECD_03908 0.70 +6.7
4,156,280 - ECD_03908 0.70 +7.0
4,156,280 - ECD_03908 0.70 +5.8
4,156,280 - ECD_03908 0.70 +6.3
4,156,280 - ECD_03908 0.70 +7.4
4,156,280 - ECD_03908 0.70 +6.1
4,156,280 - ECD_03908 0.70 +6.8
4,156,287 + ECD_03908 0.70 +6.5
4,156,288 - ECD_03908 0.70 +6.7
4,156,288 - ECD_03908 0.70 +6.6
4,156,291 + ECD_03908 0.71 +6.9
4,156,291 + ECD_03908 0.71 +6.7
4,156,291 + ECD_03908 0.71 +6.6
4,156,292 - ECD_03908 0.71 +6.9
4,156,292 - ECD_03908 0.71 +8.3
4,156,292 - ECD_03908 0.71 +6.8
4,156,292 - ECD_03908 0.71 +6.7
4,156,357 + ECD_03908 0.76 +7.2
4,156,358 - ECD_03908 0.76 +7.0
4,156,522 + ECD_03908 0.88 +6.9
4,156,555 + +6.9
4,156,556 - +6.7
4,156,572 + +7.0
4,156,573 - +6.5
4,156,681 + +4.4
4,156,684 + +3.7
4,156,758 + +0.9
4,156,767 + -2.1
4,156,768 - +1.4
4,156,768 - -0.8
4,156,804 - +1.6
4,156,994 + +0.6
4,157,009 + +1.6
4,157,010 - +0.3
4,157,010 - +1.9
4,157,010 - +0.5
4,157,013 + +1.3
4,157,013 + +0.6
4,157,013 + +2.3
4,157,014 - +0.6
4,157,014 - +0.6
4,157,014 - +0.9
4,157,172 + ECD_03909 0.27 -0.7
4,157,466 + ECD_03909 0.59 +1.6
4,157,466 + ECD_03909 0.59 +0.5
4,157,466 + ECD_03909 0.59 +0.3
4,157,522 + ECD_03909 0.65 -0.2
4,157,522 + ECD_03909 0.65 +1.2
4,157,581 + ECD_03909 0.71 +0.2
4,157,590 + ECD_03909 0.72 +0.9
4,157,591 - ECD_03909 0.72 +1.8

Or see this region's nucleotide sequence