Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03906 and ECD_03907 are separated by 364 nucleotides ECD_03907 and ECD_03908 are separated by 71 nucleotides
ECD_03906: ECD_03906 - maltose transporter subunit, at 4,152,601 to 4,153,791
_03906
ECD_03907: ECD_03907 - maltose ABC transporter ATPase, at 4,154,156 to 4,155,271
_03907
ECD_03908: ECD_03908 - maltose outer membrane porin (maltoporin), at 4,155,343 to 4,156,683
_03908
Position (kb)
4154
4155
4156 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7 at 4153.179 kb on + strand, within ECD_03906 at 4153.250 kb on + strand, within ECD_03906 at 4153.250 kb on + strand, within ECD_03906 at 4153.251 kb on - strand, within ECD_03906 at 4153.419 kb on - strand, within ECD_03906 at 4153.423 kb on + strand, within ECD_03906 at 4153.536 kb on + strand, within ECD_03906 at 4153.537 kb on - strand, within ECD_03906 at 4153.614 kb on + strand, within ECD_03906 at 4153.664 kb on + strand, within ECD_03906 at 4153.665 kb on - strand, within ECD_03906 at 4153.699 kb on - strand at 4153.699 kb on - strand at 4153.699 kb on - strand at 4153.699 kb on - strand at 4153.791 kb on + strand at 4153.797 kb on - strand at 4153.797 kb on - strand at 4153.832 kb on + strand at 4153.843 kb on + strand at 4153.844 kb on - strand at 4153.853 kb on - strand at 4153.855 kb on - strand at 4153.992 kb on + strand at 4153.992 kb on + strand at 4154.007 kb on + strand at 4154.076 kb on + strand at 4154.098 kb on + strand at 4154.099 kb on - strand at 4154.140 kb on - strand at 4154.166 kb on + strand at 4154.166 kb on + strand at 4154.166 kb on + strand at 4154.166 kb on + strand at 4154.166 kb on + strand at 4154.166 kb on + strand at 4154.167 kb on - strand at 4154.167 kb on - strand at 4154.167 kb on - strand at 4154.218 kb on + strand at 4154.289 kb on + strand, within ECD_03907 at 4154.290 kb on - strand, within ECD_03907 at 4154.389 kb on + strand, within ECD_03907 at 4154.389 kb on + strand, within ECD_03907 at 4154.406 kb on - strand, within ECD_03907 at 4154.406 kb on - strand, within ECD_03907 at 4154.517 kb on + strand, within ECD_03907 at 4154.617 kb on - strand, within ECD_03907 at 4154.720 kb on + strand, within ECD_03907 at 4154.721 kb on - strand, within ECD_03907 at 4154.819 kb on + strand, within ECD_03907 at 4155.025 kb on - strand, within ECD_03907 at 4155.140 kb on + strand, within ECD_03907 at 4155.141 kb on - strand, within ECD_03907 at 4155.165 kb on + strand at 4155.339 kb on + strand at 4155.340 kb on - strand at 4155.395 kb on + strand at 4155.395 kb on + strand at 4155.493 kb on - strand, within ECD_03908 at 4155.507 kb on + strand, within ECD_03908 at 4155.507 kb on + strand, within ECD_03908 at 4155.508 kb on - strand, within ECD_03908 at 4155.538 kb on + strand, within ECD_03908 at 4155.539 kb on - strand, within ECD_03908 at 4155.592 kb on + strand, within ECD_03908 at 4155.603 kb on + strand, within ECD_03908 at 4155.604 kb on - strand, within ECD_03908 at 4155.604 kb on - strand, within ECD_03908 at 4155.613 kb on + strand, within ECD_03908 at 4155.613 kb on + strand, within ECD_03908 at 4155.726 kb on + strand, within ECD_03908 at 4155.727 kb on - strand, within ECD_03908 at 4155.736 kb on + strand, within ECD_03908 at 4155.757 kb on - strand, within ECD_03908 at 4155.757 kb on - strand, within ECD_03908 at 4155.771 kb on - strand, within ECD_03908 at 4155.894 kb on + strand, within ECD_03908 at 4155.894 kb on + strand, within ECD_03908 at 4155.895 kb on - strand, within ECD_03908 at 4155.895 kb on - strand, within ECD_03908 at 4155.895 kb on - strand, within ECD_03908 at 4155.895 kb on - strand, within ECD_03908 at 4155.898 kb on + strand, within ECD_03908 at 4155.898 kb on + strand, within ECD_03908 at 4155.898 kb on + strand, within ECD_03908 at 4155.899 kb on - strand, within ECD_03908 at 4155.899 kb on - strand, within ECD_03908 at 4155.905 kb on - strand, within ECD_03908 at 4155.977 kb on + strand, within ECD_03908 at 4155.977 kb on + strand, within ECD_03908 at 4155.977 kb on + strand, within ECD_03908 at 4155.978 kb on - strand, within ECD_03908 at 4155.978 kb on - strand, within ECD_03908 at 4156.022 kb on - strand, within ECD_03908 at 4156.074 kb on + strand, within ECD_03908 at 4156.117 kb on + strand, within ECD_03908
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 4,153,179 + ECD_03906 0.49 -1.1 4,153,250 + ECD_03906 0.54 +1.5 4,153,250 + ECD_03906 0.54 -0.7 4,153,251 - ECD_03906 0.55 +1.3 4,153,419 - ECD_03906 0.69 +0.8 4,153,423 + ECD_03906 0.69 +1.1 4,153,536 + ECD_03906 0.79 +0.6 4,153,537 - ECD_03906 0.79 -0.2 4,153,614 + ECD_03906 0.85 -2.0 4,153,664 + ECD_03906 0.89 +0.0 4,153,665 - ECD_03906 0.89 +0.6 4,153,699 - -0.6 4,153,699 - -0.4 4,153,699 - -0.2 4,153,699 - +0.4 4,153,791 + +1.9 4,153,797 - -0.1 4,153,797 - -0.7 4,153,832 + +1.6 4,153,843 + +1.1 4,153,844 - -1.5 4,153,853 - -1.0 4,153,855 - +1.3 4,153,992 + +5.9 4,153,992 + +6.7 4,154,007 + +4.9 4,154,076 + +2.5 4,154,098 + -0.5 4,154,099 - +6.7 4,154,140 - +5.5 4,154,166 + +5.7 4,154,166 + +6.1 4,154,166 + +5.1 4,154,166 + +6.1 4,154,166 + +6.0 4,154,166 + +6.4 4,154,167 - +6.4 4,154,167 - +5.2 4,154,167 - +6.4 4,154,218 + +6.3 4,154,289 + ECD_03907 0.12 +5.6 4,154,290 - ECD_03907 0.12 +6.2 4,154,389 + ECD_03907 0.21 +6.2 4,154,389 + ECD_03907 0.21 +5.9 4,154,406 - ECD_03907 0.22 +6.5 4,154,406 - ECD_03907 0.22 +5.8 4,154,517 + ECD_03907 0.32 +3.9 4,154,617 - ECD_03907 0.41 +4.2 4,154,720 + ECD_03907 0.51 -0.6 4,154,721 - ECD_03907 0.51 +6.1 4,154,819 + ECD_03907 0.59 +0.2 4,155,025 - ECD_03907 0.78 +6.5 4,155,140 + ECD_03907 0.88 -0.2 4,155,141 - ECD_03907 0.88 +6.3 4,155,165 + -0.0 4,155,339 + +6.6 4,155,340 - +6.3 4,155,395 + +6.8 4,155,395 + +6.4 4,155,493 - ECD_03908 0.11 +6.9 4,155,507 + ECD_03908 0.12 +6.3 4,155,507 + ECD_03908 0.12 +6.6 4,155,508 - ECD_03908 0.12 +6.6 4,155,538 + ECD_03908 0.15 +6.2 4,155,539 - ECD_03908 0.15 +6.9 4,155,592 + ECD_03908 0.19 +6.7 4,155,603 + ECD_03908 0.19 +6.4 4,155,604 - ECD_03908 0.19 +6.5 4,155,604 - ECD_03908 0.19 +6.7 4,155,613 + ECD_03908 0.20 +6.1 4,155,613 + ECD_03908 0.20 +6.5 4,155,726 + ECD_03908 0.29 +6.0 4,155,727 - ECD_03908 0.29 +7.1 4,155,736 + ECD_03908 0.29 +6.5 4,155,757 - ECD_03908 0.31 +6.2 4,155,757 - ECD_03908 0.31 +6.2 4,155,771 - ECD_03908 0.32 +6.7 4,155,894 + ECD_03908 0.41 +6.5 4,155,894 + ECD_03908 0.41 +6.3 4,155,895 - ECD_03908 0.41 +6.0 4,155,895 - ECD_03908 0.41 +7.5 4,155,895 - ECD_03908 0.41 +7.0 4,155,895 - ECD_03908 0.41 +6.3 4,155,898 + ECD_03908 0.41 +6.3 4,155,898 + ECD_03908 0.41 +5.8 4,155,898 + ECD_03908 0.41 +6.4 4,155,899 - ECD_03908 0.41 +6.5 4,155,899 - ECD_03908 0.41 +6.8 4,155,905 - ECD_03908 0.42 +5.9 4,155,977 + ECD_03908 0.47 +6.7 4,155,977 + ECD_03908 0.47 +6.5 4,155,977 + ECD_03908 0.47 +6.4 4,155,978 - ECD_03908 0.47 +7.0 4,155,978 - ECD_03908 0.47 +6.4 4,156,022 - ECD_03908 0.51 +6.1 4,156,074 + ECD_03908 0.55 +6.4 4,156,117 + ECD_03908 0.58 +6.5
Or see this region's nucleotide sequence