Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03471 and ECD_03472 are separated by 3 nucleotides ECD_03472 and ECD_03473 overlap by 14 nucleotides
ECD_03471: ECD_03471 - activator of AmiB,C murein hydrolases, septal ring factor, at 3,656,039 to 3,657,298
_03471
ECD_03472: ECD_03472 - putative polysaccharide deacetylase, at 3,657,302 to 3,658,261
_03472
ECD_03473: ECD_03473 - LPS(HepIII)-glucuronic acid glycosyltransferase, at 3,658,248 to 3,659,282
_03473
Position (kb)
3657
3658
3659 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3657.296 kb on + strand at 3657.297 kb on - strand at 3657.364 kb on - strand at 3657.462 kb on + strand, within ECD_03472 at 3657.462 kb on + strand, within ECD_03472 at 3657.466 kb on - strand, within ECD_03472 at 3657.509 kb on - strand, within ECD_03472 at 3657.619 kb on + strand, within ECD_03472 at 3657.625 kb on + strand, within ECD_03472 at 3657.691 kb on + strand, within ECD_03472 at 3657.735 kb on - strand, within ECD_03472 at 3657.735 kb on - strand, within ECD_03472 at 3657.743 kb on + strand, within ECD_03472 at 3657.744 kb on - strand, within ECD_03472 at 3657.954 kb on + strand, within ECD_03472 at 3657.968 kb on + strand, within ECD_03472 at 3657.969 kb on - strand, within ECD_03472 at 3657.969 kb on - strand, within ECD_03472 at 3658.039 kb on + strand, within ECD_03472 at 3658.040 kb on - strand, within ECD_03472 at 3658.040 kb on - strand, within ECD_03472 at 3658.040 kb on - strand, within ECD_03472 at 3658.130 kb on + strand, within ECD_03472 at 3658.131 kb on - strand, within ECD_03472 at 3658.131 kb on - strand, within ECD_03472 at 3658.131 kb on - strand, within ECD_03472 at 3658.153 kb on - strand, within ECD_03472 at 3658.153 kb on - strand, within ECD_03472 at 3658.153 kb on - strand, within ECD_03472 at 3658.156 kb on - strand, within ECD_03472 at 3658.260 kb on - strand at 3658.383 kb on - strand, within ECD_03473 at 3658.383 kb on - strand, within ECD_03473 at 3658.385 kb on - strand, within ECD_03473 at 3658.385 kb on - strand, within ECD_03473 at 3658.385 kb on - strand, within ECD_03473 at 3658.385 kb on - strand, within ECD_03473 at 3658.385 kb on - strand, within ECD_03473 at 3658.388 kb on + strand, within ECD_03473 at 3658.398 kb on - strand, within ECD_03473 at 3658.398 kb on - strand, within ECD_03473 at 3658.398 kb on - strand, within ECD_03473 at 3658.402 kb on - strand, within ECD_03473 at 3658.478 kb on - strand, within ECD_03473 at 3658.626 kb on - strand, within ECD_03473 at 3658.626 kb on - strand, within ECD_03473 at 3658.644 kb on - strand, within ECD_03473 at 3658.645 kb on + strand, within ECD_03473 at 3658.646 kb on - strand, within ECD_03473 at 3658.976 kb on - strand, within ECD_03473 at 3658.976 kb on - strand, within ECD_03473 at 3659.021 kb on - strand, within ECD_03473 at 3659.120 kb on - strand, within ECD_03473 at 3659.120 kb on - strand, within ECD_03473 at 3659.120 kb on - strand, within ECD_03473 at 3659.163 kb on - strand, within ECD_03473 at 3659.240 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 3,657,296 + +1.9 3,657,297 - +0.1 3,657,364 - -1.4 3,657,462 + ECD_03472 0.17 -1.1 3,657,462 + ECD_03472 0.17 -1.3 3,657,466 - ECD_03472 0.17 -0.4 3,657,509 - ECD_03472 0.22 -2.2 3,657,619 + ECD_03472 0.33 -1.3 3,657,625 + ECD_03472 0.34 +0.4 3,657,691 + ECD_03472 0.41 -0.4 3,657,735 - ECD_03472 0.45 -1.6 3,657,735 - ECD_03472 0.45 -0.6 3,657,743 + ECD_03472 0.46 -0.3 3,657,744 - ECD_03472 0.46 -0.2 3,657,954 + ECD_03472 0.68 -1.5 3,657,968 + ECD_03472 0.69 -0.8 3,657,969 - ECD_03472 0.69 -1.3 3,657,969 - ECD_03472 0.69 -1.6 3,658,039 + ECD_03472 0.77 -1.0 3,658,040 - ECD_03472 0.77 -1.1 3,658,040 - ECD_03472 0.77 -1.2 3,658,040 - ECD_03472 0.77 -0.4 3,658,130 + ECD_03472 0.86 +0.3 3,658,131 - ECD_03472 0.86 -1.8 3,658,131 - ECD_03472 0.86 -0.8 3,658,131 - ECD_03472 0.86 +0.3 3,658,153 - ECD_03472 0.89 -0.5 3,658,153 - ECD_03472 0.89 -2.1 3,658,153 - ECD_03472 0.89 -0.2 3,658,156 - ECD_03472 0.89 -0.8 3,658,260 - -1.2 3,658,383 - ECD_03473 0.13 +0.0 3,658,383 - ECD_03473 0.13 +0.5 3,658,385 - ECD_03473 0.13 +0.6 3,658,385 - ECD_03473 0.13 -0.8 3,658,385 - ECD_03473 0.13 -0.4 3,658,385 - ECD_03473 0.13 -0.1 3,658,385 - ECD_03473 0.13 -0.2 3,658,388 + ECD_03473 0.14 -0.2 3,658,398 - ECD_03473 0.14 -0.7 3,658,398 - ECD_03473 0.14 -0.9 3,658,398 - ECD_03473 0.14 -0.1 3,658,402 - ECD_03473 0.15 -0.4 3,658,478 - ECD_03473 0.22 -0.2 3,658,626 - ECD_03473 0.37 -0.6 3,658,626 - ECD_03473 0.37 -0.3 3,658,644 - ECD_03473 0.38 -0.1 3,658,645 + ECD_03473 0.38 -0.5 3,658,646 - ECD_03473 0.38 +0.3 3,658,976 - ECD_03473 0.70 -1.3 3,658,976 - ECD_03473 0.70 +0.2 3,659,021 - ECD_03473 0.75 -0.8 3,659,120 - ECD_03473 0.84 -0.1 3,659,120 - ECD_03473 0.84 -1.0 3,659,120 - ECD_03473 0.84 -0.0 3,659,163 - ECD_03473 0.88 -0.9 3,659,240 - -0.9
Or see this region's nucleotide sequence