Strain Fitness in Escherichia coli BL21 around ECD_02985

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02984 and ECD_02985 are separated by 98 nucleotidesECD_02985 and ECD_02986 are separated by 314 nucleotidesECD_02986 and ECD_02987 are separated by 255 nucleotides ECD_02984: ECD_02984 - L-threonine dehydratase, catabolic, at 3,131,338 to 3,132,327 _02984 ECD_02985: ECD_02985 - tdc operon transcriptional activator, at 3,132,426 to 3,133,364 _02985 ECD_02986: ECD_02986 - L-threonine dehydratase operon activator protein, at 3,133,679 to 3,133,897 _02986 ECD_02987: ECD_02987 - uncharacterized protein, at 3,134,153 to 3,134,692 _02987 Position (kb) 3132 3133 3134Strain fitness (log2 ratio) -2 -1 0 1 2at 3131.509 kb on + strand, within ECD_02984at 3131.654 kb on - strand, within ECD_02984at 3131.808 kb on - strand, within ECD_02984at 3132.139 kb on - strand, within ECD_02984at 3132.588 kb on - strand, within ECD_02985at 3132.728 kb on + strand, within ECD_02985at 3132.728 kb on + strand, within ECD_02985at 3132.731 kb on + strand, within ECD_02985at 3132.745 kb on + strand, within ECD_02985at 3132.748 kb on + strand, within ECD_02985at 3132.758 kb on + strand, within ECD_02985at 3132.876 kb on + strand, within ECD_02985at 3132.904 kb on - strand, within ECD_02985at 3132.973 kb on + strand, within ECD_02985at 3132.973 kb on + strand, within ECD_02985at 3132.974 kb on - strand, within ECD_02985at 3132.978 kb on - strand, within ECD_02985at 3132.978 kb on - strand, within ECD_02985at 3132.978 kb on - strand, within ECD_02985at 3133.032 kb on - strand, within ECD_02985at 3133.095 kb on - strand, within ECD_02985at 3133.177 kb on - strand, within ECD_02985at 3134.110 kb on + strandat 3134.121 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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3,131,509 + ECD_02984 0.17 -1.9
3,131,654 - ECD_02984 0.32 +0.8
3,131,808 - ECD_02984 0.47 +0.2
3,132,139 - ECD_02984 0.81 -0.0
3,132,588 - ECD_02985 0.17 +0.9
3,132,728 + ECD_02985 0.32 +0.9
3,132,728 + ECD_02985 0.32 +1.7
3,132,731 + ECD_02985 0.32 +0.6
3,132,745 + ECD_02985 0.34 +0.5
3,132,748 + ECD_02985 0.34 +0.7
3,132,758 + ECD_02985 0.35 +0.1
3,132,876 + ECD_02985 0.48 +0.8
3,132,904 - ECD_02985 0.51 +0.4
3,132,973 + ECD_02985 0.58 +0.3
3,132,973 + ECD_02985 0.58 +2.1
3,132,974 - ECD_02985 0.58 +1.5
3,132,978 - ECD_02985 0.59 +0.3
3,132,978 - ECD_02985 0.59 +0.3
3,132,978 - ECD_02985 0.59 +0.0
3,133,032 - ECD_02985 0.65 +0.6
3,133,095 - ECD_02985 0.71 -0.7
3,133,177 - ECD_02985 0.80 -1.6
3,134,110 + -0.2
3,134,121 + +1.1

Or see this region's nucleotide sequence