Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02791 and ECD_02792 are separated by 27 nucleotides ECD_02792 and ECD_02793 are separated by 64 nucleotides
ECD_02791: ECD_02791 - adenine DNA glycosylase, at 2,933,781 to 2,934,833
_02791
ECD_02792: ECD_02792 - oxidative damage protective factor for iron-sulfur proteins, at 2,934,861 to 2,935,136
_02792
ECD_02793: ECD_02793 - membrane-bound lytic murein transglycosylase C, at 2,935,201 to 2,936,280
_02793
Position (kb)
2934
2935
2936 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 2933.871 kb on + strand at 2933.878 kb on + strand at 2933.878 kb on + strand at 2933.878 kb on + strand at 2933.878 kb on + strand at 2933.878 kb on + strand at 2933.878 kb on + strand at 2933.879 kb on - strand at 2933.879 kb on - strand at 2933.879 kb on - strand at 2933.931 kb on + strand, within ECD_02791 at 2933.946 kb on - strand, within ECD_02791 at 2934.024 kb on + strand, within ECD_02791 at 2934.025 kb on - strand, within ECD_02791 at 2934.027 kb on + strand, within ECD_02791 at 2934.027 kb on + strand, within ECD_02791 at 2934.027 kb on + strand, within ECD_02791 at 2934.076 kb on + strand, within ECD_02791 at 2934.077 kb on - strand, within ECD_02791 at 2934.197 kb on + strand, within ECD_02791 at 2934.225 kb on + strand, within ECD_02791 at 2934.225 kb on + strand, within ECD_02791 at 2934.225 kb on + strand, within ECD_02791 at 2934.226 kb on - strand, within ECD_02791 at 2934.226 kb on - strand, within ECD_02791 at 2934.266 kb on + strand, within ECD_02791 at 2934.272 kb on - strand, within ECD_02791 at 2934.272 kb on - strand, within ECD_02791 at 2934.320 kb on + strand, within ECD_02791 at 2934.356 kb on + strand, within ECD_02791 at 2934.404 kb on + strand, within ECD_02791 at 2934.404 kb on + strand, within ECD_02791 at 2934.405 kb on - strand, within ECD_02791 at 2934.422 kb on + strand, within ECD_02791 at 2934.422 kb on + strand, within ECD_02791 at 2934.423 kb on - strand, within ECD_02791 at 2934.423 kb on - strand, within ECD_02791 at 2934.491 kb on - strand, within ECD_02791 at 2934.493 kb on + strand, within ECD_02791 at 2934.511 kb on + strand, within ECD_02791 at 2934.511 kb on + strand, within ECD_02791 at 2934.511 kb on + strand, within ECD_02791 at 2934.512 kb on - strand, within ECD_02791 at 2934.555 kb on + strand, within ECD_02791 at 2934.555 kb on + strand, within ECD_02791 at 2934.555 kb on + strand, within ECD_02791 at 2934.555 kb on + strand, within ECD_02791 at 2934.656 kb on + strand, within ECD_02791 at 2934.657 kb on - strand, within ECD_02791 at 2934.657 kb on - strand, within ECD_02791 at 2934.676 kb on + strand, within ECD_02791 at 2934.676 kb on + strand, within ECD_02791 at 2934.677 kb on - strand, within ECD_02791 at 2934.680 kb on + strand, within ECD_02791 at 2934.681 kb on - strand, within ECD_02791 at 2934.681 kb on - strand, within ECD_02791 at 2934.681 kb on - strand, within ECD_02791 at 2934.690 kb on - strand, within ECD_02791 at 2934.690 kb on - strand, within ECD_02791 at 2934.747 kb on + strand at 2934.747 kb on + strand at 2934.747 kb on + strand at 2934.749 kb on + strand at 2934.750 kb on - strand at 2934.750 kb on - strand at 2934.754 kb on + strand at 2934.754 kb on + strand at 2934.881 kb on + strand at 2934.951 kb on + strand, within ECD_02792 at 2935.104 kb on - strand, within ECD_02792 at 2935.114 kb on - strand at 2935.115 kb on + strand at 2935.115 kb on + strand at 2935.116 kb on - strand at 2935.116 kb on - strand at 2935.171 kb on + strand at 2935.272 kb on + strand at 2935.276 kb on + strand at 2935.277 kb on - strand at 2935.277 kb on - strand at 2935.277 kb on - strand at 2935.342 kb on - strand, within ECD_02793 at 2935.342 kb on - strand, within ECD_02793 at 2935.402 kb on + strand, within ECD_02793 at 2935.414 kb on + strand, within ECD_02793 at 2935.449 kb on + strand, within ECD_02793 at 2935.449 kb on + strand, within ECD_02793 at 2935.455 kb on + strand, within ECD_02793 at 2935.455 kb on + strand, within ECD_02793 at 2935.456 kb on - strand, within ECD_02793 at 2935.456 kb on - strand, within ECD_02793 at 2935.509 kb on + strand, within ECD_02793 at 2935.556 kb on - strand, within ECD_02793 at 2935.573 kb on - strand, within ECD_02793 at 2935.601 kb on - strand, within ECD_02793 at 2935.669 kb on + strand, within ECD_02793 at 2935.670 kb on - strand, within ECD_02793 at 2935.713 kb on + strand, within ECD_02793 at 2935.713 kb on + strand, within ECD_02793 at 2935.714 kb on - strand, within ECD_02793 at 2935.720 kb on + strand, within ECD_02793 at 2935.720 kb on + strand, within ECD_02793 at 2935.774 kb on + strand, within ECD_02793 at 2935.774 kb on + strand, within ECD_02793 at 2935.774 kb on + strand, within ECD_02793 at 2935.775 kb on - strand, within ECD_02793 at 2935.807 kb on + strand, within ECD_02793 at 2935.839 kb on + strand, within ECD_02793 at 2935.839 kb on + strand, within ECD_02793 at 2935.840 kb on - strand, within ECD_02793 at 2935.898 kb on + strand, within ECD_02793 at 2935.910 kb on + strand, within ECD_02793 at 2935.911 kb on - strand, within ECD_02793 at 2935.911 kb on - strand, within ECD_02793 at 2935.917 kb on + strand, within ECD_02793 at 2935.917 kb on + strand, within ECD_02793 at 2935.918 kb on - strand, within ECD_02793 at 2935.998 kb on + strand, within ECD_02793 at 2936.041 kb on + strand, within ECD_02793 at 2936.041 kb on + strand, within ECD_02793 at 2936.042 kb on - strand, within ECD_02793 at 2936.096 kb on - strand, within ECD_02793
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 2,933,871 + -0.7 2,933,878 + +1.1 2,933,878 + -1.4 2,933,878 + +2.6 2,933,878 + +0.2 2,933,878 + +0.6 2,933,878 + -0.0 2,933,879 - -1.6 2,933,879 - -0.3 2,933,879 - -1.0 2,933,931 + ECD_02791 0.14 -0.4 2,933,946 - ECD_02791 0.16 -0.8 2,934,024 + ECD_02791 0.23 +0.3 2,934,025 - ECD_02791 0.23 -1.1 2,934,027 + ECD_02791 0.23 -0.3 2,934,027 + ECD_02791 0.23 -0.8 2,934,027 + ECD_02791 0.23 -0.9 2,934,076 + ECD_02791 0.28 +1.3 2,934,077 - ECD_02791 0.28 -1.8 2,934,197 + ECD_02791 0.40 -1.7 2,934,225 + ECD_02791 0.42 -0.4 2,934,225 + ECD_02791 0.42 +0.7 2,934,225 + ECD_02791 0.42 +0.2 2,934,226 - ECD_02791 0.42 +1.1 2,934,226 - ECD_02791 0.42 -1.5 2,934,266 + ECD_02791 0.46 +1.6 2,934,272 - ECD_02791 0.47 -1.1 2,934,272 - ECD_02791 0.47 +0.1 2,934,320 + ECD_02791 0.51 +0.1 2,934,356 + ECD_02791 0.55 -0.1 2,934,404 + ECD_02791 0.59 +1.1 2,934,404 + ECD_02791 0.59 -0.5 2,934,405 - ECD_02791 0.59 +0.8 2,934,422 + ECD_02791 0.61 +1.6 2,934,422 + ECD_02791 0.61 +5.3 2,934,423 - ECD_02791 0.61 -0.4 2,934,423 - ECD_02791 0.61 -1.7 2,934,491 - ECD_02791 0.67 +1.1 2,934,493 + ECD_02791 0.68 -2.2 2,934,511 + ECD_02791 0.69 +0.3 2,934,511 + ECD_02791 0.69 -0.5 2,934,511 + ECD_02791 0.69 -0.6 2,934,512 - ECD_02791 0.69 -1.7 2,934,555 + ECD_02791 0.74 +0.6 2,934,555 + ECD_02791 0.74 -0.4 2,934,555 + ECD_02791 0.74 +0.2 2,934,555 + ECD_02791 0.74 -0.4 2,934,656 + ECD_02791 0.83 -1.4 2,934,657 - ECD_02791 0.83 -1.6 2,934,657 - ECD_02791 0.83 +0.9 2,934,676 + ECD_02791 0.85 +0.6 2,934,676 + ECD_02791 0.85 +0.6 2,934,677 - ECD_02791 0.85 -0.8 2,934,680 + ECD_02791 0.85 +0.9 2,934,681 - ECD_02791 0.85 -1.6 2,934,681 - ECD_02791 0.85 +0.2 2,934,681 - ECD_02791 0.85 -1.9 2,934,690 - ECD_02791 0.86 -0.1 2,934,690 - ECD_02791 0.86 +0.2 2,934,747 + +0.6 2,934,747 + -0.4 2,934,747 + +0.3 2,934,749 + -1.4 2,934,750 - +0.3 2,934,750 - -0.6 2,934,754 + -1.1 2,934,754 + +1.0 2,934,881 + -0.4 2,934,951 + ECD_02792 0.33 -0.1 2,935,104 - ECD_02792 0.88 -0.5 2,935,114 - +1.4 2,935,115 + -0.2 2,935,115 + +0.3 2,935,116 - -0.9 2,935,116 - -0.9 2,935,171 + +1.0 2,935,272 + -0.7 2,935,276 + +0.6 2,935,277 - -0.3 2,935,277 - -0.7 2,935,277 - -1.1 2,935,342 - ECD_02793 0.13 -0.8 2,935,342 - ECD_02793 0.13 +0.5 2,935,402 + ECD_02793 0.19 -0.8 2,935,414 + ECD_02793 0.20 +0.4 2,935,449 + ECD_02793 0.23 -0.7 2,935,449 + ECD_02793 0.23 +1.8 2,935,455 + ECD_02793 0.24 -0.4 2,935,455 + ECD_02793 0.24 +0.5 2,935,456 - ECD_02793 0.24 +1.4 2,935,456 - ECD_02793 0.24 +0.8 2,935,509 + ECD_02793 0.29 +0.8 2,935,556 - ECD_02793 0.33 -1.1 2,935,573 - ECD_02793 0.34 +0.1 2,935,601 - ECD_02793 0.37 -0.5 2,935,669 + ECD_02793 0.43 -0.7 2,935,670 - ECD_02793 0.43 -0.5 2,935,713 + ECD_02793 0.47 +1.1 2,935,713 + ECD_02793 0.47 +0.4 2,935,714 - ECD_02793 0.47 +1.2 2,935,720 + ECD_02793 0.48 +1.5 2,935,720 + ECD_02793 0.48 -0.8 2,935,774 + ECD_02793 0.53 +0.2 2,935,774 + ECD_02793 0.53 -0.0 2,935,774 + ECD_02793 0.53 -0.0 2,935,775 - ECD_02793 0.53 +1.0 2,935,807 + ECD_02793 0.56 -1.5 2,935,839 + ECD_02793 0.59 -1.4 2,935,839 + ECD_02793 0.59 -0.3 2,935,840 - ECD_02793 0.59 +0.5 2,935,898 + ECD_02793 0.65 +2.0 2,935,910 + ECD_02793 0.66 +1.9 2,935,911 - ECD_02793 0.66 +0.3 2,935,911 - ECD_02793 0.66 -1.1 2,935,917 + ECD_02793 0.66 +0.5 2,935,917 + ECD_02793 0.66 +0.2 2,935,918 - ECD_02793 0.66 -0.4 2,935,998 + ECD_02793 0.74 +1.1 2,936,041 + ECD_02793 0.78 -0.2 2,936,041 + ECD_02793 0.78 +0.9 2,936,042 - ECD_02793 0.78 -0.9 2,936,096 - ECD_02793 0.83 -0.2
Or see this region's nucleotide sequence