Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02772 and ECD_02773 are separated by 423 nucleotides ECD_02773 and ECD_02774 are separated by 76 nucleotides ECD_02774 and ECD_02775 are separated by 94 nucleotides
ECD_02772: ECD_02772 - S-adenosylmethionine synthetase, at 2,917,564 to 2,918,718
_02772
ECD_02773: ECD_02773 - D-galactose transporter, at 2,919,142 to 2,920,536
_02773
ECD_02774: ECD_02774 - Zn-dependent metalloprotease-related protein, at 2,920,613 to 2,921,110
_02774
ECD_02775: ECD_02775 - DNA-specific endonuclease I, at 2,921,205 to 2,921,912
_02775
Position (kb)
2919
2920
2921 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2918.816 kb on - strand at 2918.851 kb on + strand at 2918.874 kb on - strand at 2918.961 kb on + strand at 2918.995 kb on - strand at 2919.035 kb on + strand at 2919.047 kb on + strand at 2919.092 kb on + strand at 2919.105 kb on + strand at 2919.128 kb on + strand at 2919.245 kb on + strand at 2919.246 kb on - strand at 2919.246 kb on - strand at 2919.246 kb on - strand at 2919.268 kb on - strand at 2919.289 kb on - strand, within ECD_02773 at 2919.289 kb on - strand, within ECD_02773 at 2919.314 kb on + strand, within ECD_02773 at 2919.314 kb on + strand, within ECD_02773 at 2919.461 kb on + strand, within ECD_02773 at 2919.461 kb on + strand, within ECD_02773 at 2919.462 kb on - strand, within ECD_02773 at 2919.464 kb on - strand, within ECD_02773 at 2919.512 kb on - strand, within ECD_02773 at 2919.513 kb on + strand, within ECD_02773 at 2919.565 kb on - strand, within ECD_02773 at 2919.565 kb on - strand, within ECD_02773 at 2919.573 kb on + strand, within ECD_02773 at 2919.573 kb on + strand, within ECD_02773 at 2919.574 kb on - strand, within ECD_02773 at 2919.574 kb on - strand, within ECD_02773 at 2919.577 kb on + strand, within ECD_02773 at 2919.577 kb on + strand, within ECD_02773 at 2919.577 kb on + strand, within ECD_02773 at 2919.577 kb on + strand, within ECD_02773 at 2919.613 kb on + strand, within ECD_02773 at 2919.613 kb on + strand, within ECD_02773 at 2919.614 kb on - strand, within ECD_02773 at 2919.673 kb on - strand, within ECD_02773 at 2919.777 kb on - strand, within ECD_02773 at 2919.920 kb on + strand, within ECD_02773 at 2919.920 kb on + strand, within ECD_02773 at 2919.920 kb on + strand, within ECD_02773 at 2919.921 kb on - strand, within ECD_02773 at 2919.955 kb on + strand, within ECD_02773 at 2919.955 kb on + strand, within ECD_02773 at 2919.956 kb on - strand, within ECD_02773 at 2919.956 kb on - strand, within ECD_02773 at 2919.989 kb on - strand, within ECD_02773 at 2919.989 kb on - strand, within ECD_02773 at 2919.990 kb on + strand, within ECD_02773 at 2919.990 kb on + strand, within ECD_02773 at 2919.990 kb on + strand, within ECD_02773 at 2919.991 kb on - strand, within ECD_02773 at 2919.991 kb on - strand, within ECD_02773 at 2919.991 kb on - strand, within ECD_02773 at 2920.043 kb on + strand, within ECD_02773 at 2920.043 kb on + strand, within ECD_02773 at 2920.043 kb on + strand, within ECD_02773 at 2920.043 kb on + strand, within ECD_02773 at 2920.043 kb on + strand, within ECD_02773 at 2920.044 kb on - strand, within ECD_02773 at 2920.089 kb on + strand, within ECD_02773 at 2920.090 kb on - strand, within ECD_02773 at 2920.139 kb on + strand, within ECD_02773 at 2920.140 kb on - strand, within ECD_02773 at 2920.215 kb on + strand, within ECD_02773 at 2920.215 kb on + strand, within ECD_02773 at 2920.402 kb on + strand at 2920.403 kb on - strand at 2920.403 kb on - strand at 2920.403 kb on - strand at 2920.419 kb on - strand at 2920.419 kb on - strand at 2920.479 kb on + strand at 2920.479 kb on + strand at 2920.479 kb on + strand at 2920.479 kb on + strand at 2920.480 kb on - strand at 2920.480 kb on - strand at 2920.480 kb on - strand at 2920.480 kb on - strand at 2920.488 kb on + strand at 2920.489 kb on - strand at 2920.534 kb on + strand at 2920.730 kb on + strand, within ECD_02774 at 2920.731 kb on - strand, within ECD_02774 at 2920.776 kb on - strand, within ECD_02774 at 2921.027 kb on - strand, within ECD_02774 at 2921.031 kb on + strand, within ECD_02774 at 2921.122 kb on - strand at 2921.172 kb on - strand at 2921.199 kb on + strand at 2921.199 kb on + strand at 2921.199 kb on + strand at 2921.200 kb on - strand at 2921.208 kb on + strand at 2921.208 kb on + strand at 2921.209 kb on - strand at 2921.222 kb on + strand at 2921.222 kb on + strand at 2921.223 kb on - strand at 2921.223 kb on - strand at 2921.277 kb on - strand, within ECD_02775 at 2921.354 kb on + strand, within ECD_02775 at 2921.443 kb on + strand, within ECD_02775 at 2921.444 kb on - strand, within ECD_02775 at 2921.525 kb on + strand, within ECD_02775
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 2,918,816 - +1.3 2,918,851 + -0.5 2,918,874 - +0.9 2,918,961 + -0.9 2,918,995 - +0.8 2,919,035 + -0.2 2,919,047 + -1.2 2,919,092 + +2.1 2,919,105 + +0.2 2,919,128 + -2.0 2,919,245 + -2.2 2,919,246 - +0.4 2,919,246 - +0.3 2,919,246 - +0.9 2,919,268 - -0.2 2,919,289 - ECD_02773 0.11 +0.0 2,919,289 - ECD_02773 0.11 -2.2 2,919,314 + ECD_02773 0.12 +0.2 2,919,314 + ECD_02773 0.12 -1.2 2,919,461 + ECD_02773 0.23 -1.5 2,919,461 + ECD_02773 0.23 -0.8 2,919,462 - ECD_02773 0.23 +1.5 2,919,464 - ECD_02773 0.23 -0.6 2,919,512 - ECD_02773 0.27 -1.5 2,919,513 + ECD_02773 0.27 +0.4 2,919,565 - ECD_02773 0.30 -1.2 2,919,565 - ECD_02773 0.30 +0.3 2,919,573 + ECD_02773 0.31 -0.4 2,919,573 + ECD_02773 0.31 -0.8 2,919,574 - ECD_02773 0.31 +0.9 2,919,574 - ECD_02773 0.31 -0.3 2,919,577 + ECD_02773 0.31 +1.7 2,919,577 + ECD_02773 0.31 -0.0 2,919,577 + ECD_02773 0.31 -2.5 2,919,577 + ECD_02773 0.31 -2.0 2,919,613 + ECD_02773 0.34 -0.1 2,919,613 + ECD_02773 0.34 -0.7 2,919,614 - ECD_02773 0.34 -0.8 2,919,673 - ECD_02773 0.38 -1.0 2,919,777 - ECD_02773 0.46 -0.4 2,919,920 + ECD_02773 0.56 +0.4 2,919,920 + ECD_02773 0.56 -0.1 2,919,920 + ECD_02773 0.56 -1.1 2,919,921 - ECD_02773 0.56 -0.1 2,919,955 + ECD_02773 0.58 -1.8 2,919,955 + ECD_02773 0.58 +0.4 2,919,956 - ECD_02773 0.58 -0.2 2,919,956 - ECD_02773 0.58 +0.8 2,919,989 - ECD_02773 0.61 -0.7 2,919,989 - ECD_02773 0.61 -0.1 2,919,990 + ECD_02773 0.61 +0.0 2,919,990 + ECD_02773 0.61 +0.1 2,919,990 + ECD_02773 0.61 -1.3 2,919,991 - ECD_02773 0.61 -0.5 2,919,991 - ECD_02773 0.61 +0.2 2,919,991 - ECD_02773 0.61 -1.3 2,920,043 + ECD_02773 0.65 -0.5 2,920,043 + ECD_02773 0.65 -0.4 2,920,043 + ECD_02773 0.65 -0.9 2,920,043 + ECD_02773 0.65 +0.4 2,920,043 + ECD_02773 0.65 -0.3 2,920,044 - ECD_02773 0.65 -0.3 2,920,089 + ECD_02773 0.68 -0.0 2,920,090 - ECD_02773 0.68 -0.2 2,920,139 + ECD_02773 0.71 -1.7 2,920,140 - ECD_02773 0.72 +0.8 2,920,215 + ECD_02773 0.77 -1.1 2,920,215 + ECD_02773 0.77 -1.5 2,920,402 + +3.2 2,920,403 - -0.5 2,920,403 - +0.2 2,920,403 - +1.5 2,920,419 - +0.7 2,920,419 - -0.1 2,920,479 + +1.1 2,920,479 + -0.1 2,920,479 + -1.2 2,920,479 + +0.2 2,920,480 - -0.5 2,920,480 - -0.9 2,920,480 - -0.7 2,920,480 - +0.4 2,920,488 + +0.2 2,920,489 - +0.3 2,920,534 + -0.5 2,920,730 + ECD_02774 0.23 -0.1 2,920,731 - ECD_02774 0.24 -1.0 2,920,776 - ECD_02774 0.33 -1.5 2,921,027 - ECD_02774 0.83 +0.7 2,921,031 + ECD_02774 0.84 -1.3 2,921,122 - +0.4 2,921,172 - -0.3 2,921,199 + -0.4 2,921,199 + +0.0 2,921,199 + -1.1 2,921,200 - +0.5 2,921,208 + +0.2 2,921,208 + -0.3 2,921,209 - +0.4 2,921,222 + -0.6 2,921,222 + -0.8 2,921,223 - +0.3 2,921,223 - -0.7 2,921,277 - ECD_02775 0.10 +1.1 2,921,354 + ECD_02775 0.21 -0.6 2,921,443 + ECD_02775 0.34 +1.3 2,921,444 - ECD_02775 0.34 +0.1 2,921,525 + ECD_02775 0.45 +0.8
Or see this region's nucleotide sequence