Strain Fitness in Escherichia coli BL21 around ECD_02773

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02772 and ECD_02773 are separated by 423 nucleotidesECD_02773 and ECD_02774 are separated by 76 nucleotidesECD_02774 and ECD_02775 are separated by 94 nucleotides ECD_02772: ECD_02772 - S-adenosylmethionine synthetase, at 2,917,564 to 2,918,718 _02772 ECD_02773: ECD_02773 - D-galactose transporter, at 2,919,142 to 2,920,536 _02773 ECD_02774: ECD_02774 - Zn-dependent metalloprotease-related protein, at 2,920,613 to 2,921,110 _02774 ECD_02775: ECD_02775 - DNA-specific endonuclease I, at 2,921,205 to 2,921,912 _02775 Position (kb) 2919 2920 2921Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2918.816 kb on - strandat 2918.851 kb on + strandat 2918.874 kb on - strandat 2918.961 kb on + strandat 2918.995 kb on - strandat 2919.035 kb on + strandat 2919.047 kb on + strandat 2919.092 kb on + strandat 2919.105 kb on + strandat 2919.128 kb on + strandat 2919.245 kb on + strandat 2919.246 kb on - strandat 2919.246 kb on - strandat 2919.246 kb on - strandat 2919.268 kb on - strandat 2919.289 kb on - strand, within ECD_02773at 2919.289 kb on - strand, within ECD_02773at 2919.314 kb on + strand, within ECD_02773at 2919.314 kb on + strand, within ECD_02773at 2919.461 kb on + strand, within ECD_02773at 2919.461 kb on + strand, within ECD_02773at 2919.462 kb on - strand, within ECD_02773at 2919.464 kb on - strand, within ECD_02773at 2919.512 kb on - strand, within ECD_02773at 2919.513 kb on + strand, within ECD_02773at 2919.565 kb on - strand, within ECD_02773at 2919.565 kb on - strand, within ECD_02773at 2919.573 kb on + strand, within ECD_02773at 2919.573 kb on + strand, within ECD_02773at 2919.574 kb on - strand, within ECD_02773at 2919.574 kb on - strand, within ECD_02773at 2919.577 kb on + strand, within ECD_02773at 2919.577 kb on + strand, within ECD_02773at 2919.577 kb on + strand, within ECD_02773at 2919.577 kb on + strand, within ECD_02773at 2919.613 kb on + strand, within ECD_02773at 2919.613 kb on + strand, within ECD_02773at 2919.614 kb on - strand, within ECD_02773at 2919.673 kb on - strand, within ECD_02773at 2919.777 kb on - strand, within ECD_02773at 2919.920 kb on + strand, within ECD_02773at 2919.920 kb on + strand, within ECD_02773at 2919.920 kb on + strand, within ECD_02773at 2919.921 kb on - strand, within ECD_02773at 2919.955 kb on + strand, within ECD_02773at 2919.955 kb on + strand, within ECD_02773at 2919.956 kb on - strand, within ECD_02773at 2919.956 kb on - strand, within ECD_02773at 2919.989 kb on - strand, within ECD_02773at 2919.989 kb on - strand, within ECD_02773at 2919.990 kb on + strand, within ECD_02773at 2919.990 kb on + strand, within ECD_02773at 2919.990 kb on + strand, within ECD_02773at 2919.991 kb on - strand, within ECD_02773at 2919.991 kb on - strand, within ECD_02773at 2919.991 kb on - strand, within ECD_02773at 2920.043 kb on + strand, within ECD_02773at 2920.043 kb on + strand, within ECD_02773at 2920.043 kb on + strand, within ECD_02773at 2920.043 kb on + strand, within ECD_02773at 2920.043 kb on + strand, within ECD_02773at 2920.044 kb on - strand, within ECD_02773at 2920.089 kb on + strand, within ECD_02773at 2920.090 kb on - strand, within ECD_02773at 2920.139 kb on + strand, within ECD_02773at 2920.140 kb on - strand, within ECD_02773at 2920.215 kb on + strand, within ECD_02773at 2920.215 kb on + strand, within ECD_02773at 2920.402 kb on + strandat 2920.403 kb on - strandat 2920.403 kb on - strandat 2920.403 kb on - strandat 2920.419 kb on - strandat 2920.419 kb on - strandat 2920.479 kb on + strandat 2920.479 kb on + strandat 2920.479 kb on + strandat 2920.479 kb on + strandat 2920.480 kb on - strandat 2920.480 kb on - strandat 2920.480 kb on - strandat 2920.480 kb on - strandat 2920.488 kb on + strandat 2920.489 kb on - strandat 2920.534 kb on + strandat 2920.730 kb on + strand, within ECD_02774at 2920.731 kb on - strand, within ECD_02774at 2920.776 kb on - strand, within ECD_02774at 2921.027 kb on - strand, within ECD_02774at 2921.031 kb on + strand, within ECD_02774at 2921.122 kb on - strandat 2921.172 kb on - strandat 2921.199 kb on + strandat 2921.199 kb on + strandat 2921.199 kb on + strandat 2921.200 kb on - strandat 2921.208 kb on + strandat 2921.208 kb on + strandat 2921.209 kb on - strandat 2921.222 kb on + strandat 2921.222 kb on + strandat 2921.223 kb on - strandat 2921.223 kb on - strandat 2921.277 kb on - strand, within ECD_02775at 2921.354 kb on + strand, within ECD_02775at 2921.443 kb on + strand, within ECD_02775at 2921.444 kb on - strand, within ECD_02775at 2921.525 kb on + strand, within ECD_02775

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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2,918,816 - +1.3
2,918,851 + -0.5
2,918,874 - +0.9
2,918,961 + -0.9
2,918,995 - +0.8
2,919,035 + -0.2
2,919,047 + -1.2
2,919,092 + +2.1
2,919,105 + +0.2
2,919,128 + -2.0
2,919,245 + -2.2
2,919,246 - +0.4
2,919,246 - +0.3
2,919,246 - +0.9
2,919,268 - -0.2
2,919,289 - ECD_02773 0.11 +0.0
2,919,289 - ECD_02773 0.11 -2.2
2,919,314 + ECD_02773 0.12 +0.2
2,919,314 + ECD_02773 0.12 -1.2
2,919,461 + ECD_02773 0.23 -1.5
2,919,461 + ECD_02773 0.23 -0.8
2,919,462 - ECD_02773 0.23 +1.5
2,919,464 - ECD_02773 0.23 -0.6
2,919,512 - ECD_02773 0.27 -1.5
2,919,513 + ECD_02773 0.27 +0.4
2,919,565 - ECD_02773 0.30 -1.2
2,919,565 - ECD_02773 0.30 +0.3
2,919,573 + ECD_02773 0.31 -0.4
2,919,573 + ECD_02773 0.31 -0.8
2,919,574 - ECD_02773 0.31 +0.9
2,919,574 - ECD_02773 0.31 -0.3
2,919,577 + ECD_02773 0.31 +1.7
2,919,577 + ECD_02773 0.31 -0.0
2,919,577 + ECD_02773 0.31 -2.5
2,919,577 + ECD_02773 0.31 -2.0
2,919,613 + ECD_02773 0.34 -0.1
2,919,613 + ECD_02773 0.34 -0.7
2,919,614 - ECD_02773 0.34 -0.8
2,919,673 - ECD_02773 0.38 -1.0
2,919,777 - ECD_02773 0.46 -0.4
2,919,920 + ECD_02773 0.56 +0.4
2,919,920 + ECD_02773 0.56 -0.1
2,919,920 + ECD_02773 0.56 -1.1
2,919,921 - ECD_02773 0.56 -0.1
2,919,955 + ECD_02773 0.58 -1.8
2,919,955 + ECD_02773 0.58 +0.4
2,919,956 - ECD_02773 0.58 -0.2
2,919,956 - ECD_02773 0.58 +0.8
2,919,989 - ECD_02773 0.61 -0.7
2,919,989 - ECD_02773 0.61 -0.1
2,919,990 + ECD_02773 0.61 +0.0
2,919,990 + ECD_02773 0.61 +0.1
2,919,990 + ECD_02773 0.61 -1.3
2,919,991 - ECD_02773 0.61 -0.5
2,919,991 - ECD_02773 0.61 +0.2
2,919,991 - ECD_02773 0.61 -1.3
2,920,043 + ECD_02773 0.65 -0.5
2,920,043 + ECD_02773 0.65 -0.4
2,920,043 + ECD_02773 0.65 -0.9
2,920,043 + ECD_02773 0.65 +0.4
2,920,043 + ECD_02773 0.65 -0.3
2,920,044 - ECD_02773 0.65 -0.3
2,920,089 + ECD_02773 0.68 -0.0
2,920,090 - ECD_02773 0.68 -0.2
2,920,139 + ECD_02773 0.71 -1.7
2,920,140 - ECD_02773 0.72 +0.8
2,920,215 + ECD_02773 0.77 -1.1
2,920,215 + ECD_02773 0.77 -1.5
2,920,402 + +3.2
2,920,403 - -0.5
2,920,403 - +0.2
2,920,403 - +1.5
2,920,419 - +0.7
2,920,419 - -0.1
2,920,479 + +1.1
2,920,479 + -0.1
2,920,479 + -1.2
2,920,479 + +0.2
2,920,480 - -0.5
2,920,480 - -0.9
2,920,480 - -0.7
2,920,480 - +0.4
2,920,488 + +0.2
2,920,489 - +0.3
2,920,534 + -0.5
2,920,730 + ECD_02774 0.23 -0.1
2,920,731 - ECD_02774 0.24 -1.0
2,920,776 - ECD_02774 0.33 -1.5
2,921,027 - ECD_02774 0.83 +0.7
2,921,031 + ECD_02774 0.84 -1.3
2,921,122 - +0.4
2,921,172 - -0.3
2,921,199 + -0.4
2,921,199 + +0.0
2,921,199 + -1.1
2,921,200 - +0.5
2,921,208 + +0.2
2,921,208 + -0.3
2,921,209 - +0.4
2,921,222 + -0.6
2,921,222 + -0.8
2,921,223 - +0.3
2,921,223 - -0.7
2,921,277 - ECD_02775 0.10 +1.1
2,921,354 + ECD_02775 0.21 -0.6
2,921,443 + ECD_02775 0.34 +1.3
2,921,444 - ECD_02775 0.34 +0.1
2,921,525 + ECD_02775 0.45 +0.8

Or see this region's nucleotide sequence