Strain Fitness in Escherichia coli BL21 around ECD_02613

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02611 and ECD_02612 overlap by 10 nucleotidesECD_02612 and ECD_02613 are separated by 16 nucleotidesECD_02613 and ECD_02614 are separated by 147 nucleotides ECD_02611: ECD_02611 - putative oxidoreductase, at 2,724,818 to 2,726,089 _02611 ECD_02612: ECD_02612 - putative 4Fe-4S cluster-containing protein, at 2,726,080 to 2,726,340 _02612 ECD_02613: ECD_02613 - putative antiterminator regulatory protein, at 2,726,357 to 2,726,932 _02613 ECD_02614: ECD_02614 - putative flavoprotein, at 2,727,080 to 2,727,940 _02614 Position (kb) 2726 2727Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2725.479 kb on - strand, within ECD_02611at 2725.480 kb on + strand, within ECD_02611at 2725.480 kb on + strand, within ECD_02611at 2725.480 kb on + strand, within ECD_02611at 2725.481 kb on - strand, within ECD_02611at 2725.481 kb on - strand, within ECD_02611at 2725.481 kb on - strand, within ECD_02611at 2725.481 kb on - strand, within ECD_02611at 2725.481 kb on - strand, within ECD_02611at 2725.483 kb on + strand, within ECD_02611at 2725.600 kb on + strand, within ECD_02611at 2725.625 kb on + strand, within ECD_02611at 2725.625 kb on + strand, within ECD_02611at 2725.625 kb on + strand, within ECD_02611at 2725.625 kb on + strand, within ECD_02611at 2725.625 kb on + strand, within ECD_02611at 2725.625 kb on + strand, within ECD_02611at 2725.625 kb on + strand, within ECD_02611at 2725.626 kb on - strand, within ECD_02611at 2725.626 kb on - strand, within ECD_02611at 2725.626 kb on - strand, within ECD_02611at 2725.626 kb on - strand, within ECD_02611at 2725.626 kb on - strand, within ECD_02611at 2725.626 kb on - strand, within ECD_02611at 2725.756 kb on + strand, within ECD_02611at 2725.798 kb on - strand, within ECD_02611at 2725.798 kb on - strand, within ECD_02611at 2725.809 kb on - strand, within ECD_02611at 2725.842 kb on - strand, within ECD_02611at 2725.855 kb on - strand, within ECD_02611at 2725.855 kb on - strand, within ECD_02611at 2725.881 kb on + strand, within ECD_02611at 2725.882 kb on - strand, within ECD_02611at 2725.929 kb on - strand, within ECD_02611at 2725.933 kb on + strand, within ECD_02611at 2725.933 kb on + strand, within ECD_02611at 2725.933 kb on + strand, within ECD_02611at 2725.934 kb on - strand, within ECD_02611at 2725.948 kb on - strand, within ECD_02611at 2725.958 kb on - strand, within ECD_02611at 2725.958 kb on - strand, within ECD_02611at 2725.958 kb on - strand, within ECD_02611at 2725.987 kb on + strandat 2726.014 kb on - strandat 2726.028 kb on + strandat 2726.028 kb on + strandat 2726.028 kb on + strandat 2726.087 kb on + strandat 2726.214 kb on + strand, within ECD_02612at 2726.214 kb on + strand, within ECD_02612at 2726.214 kb on + strand, within ECD_02612at 2726.214 kb on + strand, within ECD_02612at 2726.219 kb on + strand, within ECD_02612at 2726.219 kb on + strand, within ECD_02612at 2726.219 kb on + strand, within ECD_02612at 2726.219 kb on + strand, within ECD_02612at 2726.219 kb on + strand, within ECD_02612at 2726.219 kb on + strand, within ECD_02612at 2726.219 kb on + strand, within ECD_02612at 2726.219 kb on + strand, within ECD_02612at 2726.219 kb on + strand, within ECD_02612at 2726.219 kb on + strand, within ECD_02612at 2726.219 kb on + strand, within ECD_02612at 2726.220 kb on - strand, within ECD_02612at 2726.220 kb on - strand, within ECD_02612at 2726.220 kb on - strand, within ECD_02612at 2726.220 kb on - strand, within ECD_02612at 2726.220 kb on - strand, within ECD_02612at 2726.220 kb on - strand, within ECD_02612at 2726.220 kb on - strand, within ECD_02612at 2726.220 kb on - strand, within ECD_02612at 2726.220 kb on - strand, within ECD_02612at 2726.220 kb on - strand, within ECD_02612at 2726.223 kb on + strand, within ECD_02612at 2726.223 kb on + strand, within ECD_02612at 2726.223 kb on + strand, within ECD_02612at 2726.223 kb on + strand, within ECD_02612at 2726.223 kb on + strand, within ECD_02612at 2726.224 kb on - strand, within ECD_02612at 2726.224 kb on - strand, within ECD_02612at 2726.224 kb on - strand, within ECD_02612at 2726.224 kb on - strand, within ECD_02612at 2726.224 kb on - strand, within ECD_02612at 2726.231 kb on - strand, within ECD_02612at 2726.285 kb on + strand, within ECD_02612at 2726.285 kb on + strand, within ECD_02612at 2726.285 kb on + strand, within ECD_02612at 2726.285 kb on + strand, within ECD_02612at 2726.285 kb on + strand, within ECD_02612at 2726.285 kb on + strand, within ECD_02612at 2726.285 kb on + strand, within ECD_02612at 2726.286 kb on - strand, within ECD_02612at 2726.286 kb on - strand, within ECD_02612at 2726.286 kb on - strand, within ECD_02612at 2726.286 kb on - strand, within ECD_02612at 2726.286 kb on - strand, within ECD_02612at 2726.286 kb on - strand, within ECD_02612at 2726.326 kb on + strandat 2726.327 kb on - strandat 2726.342 kb on + strandat 2726.342 kb on + strandat 2726.342 kb on + strandat 2726.342 kb on + strandat 2726.343 kb on - strandat 2726.343 kb on - strandat 2726.343 kb on - strandat 2726.343 kb on - strandat 2726.343 kb on - strandat 2726.343 kb on - strandat 2726.343 kb on - strandat 2726.351 kb on + strandat 2726.352 kb on - strandat 2726.352 kb on - strandat 2726.356 kb on + strandat 2726.367 kb on + strandat 2726.367 kb on + strandat 2726.368 kb on - strandat 2726.411 kb on - strandat 2726.453 kb on - strand, within ECD_02613at 2726.453 kb on - strand, within ECD_02613at 2726.453 kb on - strand, within ECD_02613at 2726.489 kb on - strand, within ECD_02613at 2726.489 kb on - strand, within ECD_02613at 2726.489 kb on - strand, within ECD_02613at 2726.489 kb on - strand, within ECD_02613at 2726.498 kb on - strand, within ECD_02613at 2726.506 kb on + strand, within ECD_02613at 2726.506 kb on + strand, within ECD_02613at 2726.563 kb on + strand, within ECD_02613at 2726.563 kb on + strand, within ECD_02613at 2726.563 kb on + strand, within ECD_02613at 2726.563 kb on + strand, within ECD_02613at 2726.668 kb on + strand, within ECD_02613at 2726.669 kb on - strand, within ECD_02613at 2726.746 kb on + strand, within ECD_02613at 2726.768 kb on - strand, within ECD_02613at 2726.855 kb on - strand, within ECD_02613at 2727.025 kb on - strandat 2727.034 kb on - strandat 2727.056 kb on + strandat 2727.057 kb on - strandat 2727.082 kb on - strandat 2727.212 kb on - strand, within ECD_02614at 2727.212 kb on - strand, within ECD_02614at 2727.262 kb on + strand, within ECD_02614at 2727.262 kb on + strand, within ECD_02614at 2727.262 kb on + strand, within ECD_02614at 2727.262 kb on + strand, within ECD_02614at 2727.262 kb on + strand, within ECD_02614at 2727.262 kb on + strand, within ECD_02614at 2727.263 kb on - strand, within ECD_02614at 2727.263 kb on - strand, within ECD_02614at 2727.263 kb on - strand, within ECD_02614at 2727.263 kb on - strand, within ECD_02614at 2727.263 kb on - strand, within ECD_02614at 2727.263 kb on - strand, within ECD_02614at 2727.263 kb on - strand, within ECD_02614at 2727.348 kb on + strand, within ECD_02614at 2727.349 kb on - strand, within ECD_02614at 2727.349 kb on - strand, within ECD_02614at 2727.383 kb on - strand, within ECD_02614at 2727.398 kb on - strand, within ECD_02614at 2727.657 kb on - strand, within ECD_02614at 2727.667 kb on + strand, within ECD_02614at 2727.668 kb on - strand, within ECD_02614at 2727.668 kb on - strand, within ECD_02614at 2727.668 kb on - strand, within ECD_02614at 2727.668 kb on - strand, within ECD_02614at 2727.671 kb on + strand, within ECD_02614at 2727.671 kb on + strand, within ECD_02614at 2727.672 kb on - strand, within ECD_02614at 2727.704 kb on + strand, within ECD_02614at 2727.704 kb on + strand, within ECD_02614at 2727.704 kb on + strand, within ECD_02614at 2727.704 kb on + strand, within ECD_02614at 2727.705 kb on - strand, within ECD_02614at 2727.705 kb on - strand, within ECD_02614at 2727.705 kb on - strand, within ECD_02614at 2727.705 kb on - strand, within ECD_02614at 2727.705 kb on - strand, within ECD_02614at 2727.825 kb on - strand, within ECD_02614at 2727.859 kb on + strandat 2727.859 kb on + strandat 2727.860 kb on - strandat 2727.896 kb on + strandat 2727.897 kb on - strandat 2727.897 kb on - strandat 2727.897 kb on - strandat 2727.918 kb on - strandat 2727.918 kb on - strandat 2727.918 kb on - strandat 2727.918 kb on - strandat 2727.918 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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2,725,479 - ECD_02611 0.52 -0.8
2,725,480 + ECD_02611 0.52 -0.9
2,725,480 + ECD_02611 0.52 -0.3
2,725,480 + ECD_02611 0.52 +1.5
2,725,481 - ECD_02611 0.52 +0.2
2,725,481 - ECD_02611 0.52 +0.5
2,725,481 - ECD_02611 0.52 +0.6
2,725,481 - ECD_02611 0.52 +0.0
2,725,481 - ECD_02611 0.52 +0.9
2,725,483 + ECD_02611 0.52 +1.0
2,725,600 + ECD_02611 0.61 +2.9
2,725,625 + ECD_02611 0.63 +1.7
2,725,625 + ECD_02611 0.63 -0.5
2,725,625 + ECD_02611 0.63 -0.4
2,725,625 + ECD_02611 0.63 -0.1
2,725,625 + ECD_02611 0.63 +1.0
2,725,625 + ECD_02611 0.63 +0.0
2,725,625 + ECD_02611 0.63 -0.5
2,725,626 - ECD_02611 0.64 -0.8
2,725,626 - ECD_02611 0.64 -1.3
2,725,626 - ECD_02611 0.64 +0.3
2,725,626 - ECD_02611 0.64 -0.2
2,725,626 - ECD_02611 0.64 -0.9
2,725,626 - ECD_02611 0.64 -0.9
2,725,756 + ECD_02611 0.74 -2.0
2,725,798 - ECD_02611 0.77 +0.2
2,725,798 - ECD_02611 0.77 -0.3
2,725,809 - ECD_02611 0.78 -0.3
2,725,842 - ECD_02611 0.81 +0.0
2,725,855 - ECD_02611 0.82 +0.6
2,725,855 - ECD_02611 0.82 +0.3
2,725,881 + ECD_02611 0.84 +0.8
2,725,882 - ECD_02611 0.84 +1.0
2,725,929 - ECD_02611 0.87 -0.3
2,725,933 + ECD_02611 0.88 -0.8
2,725,933 + ECD_02611 0.88 +0.5
2,725,933 + ECD_02611 0.88 -2.0
2,725,934 - ECD_02611 0.88 -1.4
2,725,948 - ECD_02611 0.89 -0.5
2,725,958 - ECD_02611 0.90 -0.2
2,725,958 - ECD_02611 0.90 +0.5
2,725,958 - ECD_02611 0.90 +0.9
2,725,987 + -0.7
2,726,014 - +1.4
2,726,028 + +0.1
2,726,028 + -0.7
2,726,028 + +1.7
2,726,087 + +1.0
2,726,214 + ECD_02612 0.51 +0.8
2,726,214 + ECD_02612 0.51 -1.0
2,726,214 + ECD_02612 0.51 -0.2
2,726,214 + ECD_02612 0.51 +1.8
2,726,219 + ECD_02612 0.53 +0.0
2,726,219 + ECD_02612 0.53 +0.4
2,726,219 + ECD_02612 0.53 -0.3
2,726,219 + ECD_02612 0.53 +0.7
2,726,219 + ECD_02612 0.53 +0.9
2,726,219 + ECD_02612 0.53 -0.9
2,726,219 + ECD_02612 0.53 +1.1
2,726,219 + ECD_02612 0.53 +0.1
2,726,219 + ECD_02612 0.53 +0.7
2,726,219 + ECD_02612 0.53 +1.3
2,726,219 + ECD_02612 0.53 +0.9
2,726,220 - ECD_02612 0.54 +0.3
2,726,220 - ECD_02612 0.54 +0.1
2,726,220 - ECD_02612 0.54 -0.6
2,726,220 - ECD_02612 0.54 +0.2
2,726,220 - ECD_02612 0.54 +0.3
2,726,220 - ECD_02612 0.54 +0.7
2,726,220 - ECD_02612 0.54 -2.0
2,726,220 - ECD_02612 0.54 +0.4
2,726,220 - ECD_02612 0.54 +1.1
2,726,220 - ECD_02612 0.54 +0.2
2,726,223 + ECD_02612 0.55 +1.0
2,726,223 + ECD_02612 0.55 +0.8
2,726,223 + ECD_02612 0.55 -1.4
2,726,223 + ECD_02612 0.55 -0.1
2,726,223 + ECD_02612 0.55 +1.9
2,726,224 - ECD_02612 0.55 -0.8
2,726,224 - ECD_02612 0.55 +0.8
2,726,224 - ECD_02612 0.55 +0.4
2,726,224 - ECD_02612 0.55 +0.4
2,726,224 - ECD_02612 0.55 +2.9
2,726,231 - ECD_02612 0.58 +1.7
2,726,285 + ECD_02612 0.79 -0.6
2,726,285 + ECD_02612 0.79 -1.5
2,726,285 + ECD_02612 0.79 -0.2
2,726,285 + ECD_02612 0.79 +0.1
2,726,285 + ECD_02612 0.79 -0.9
2,726,285 + ECD_02612 0.79 -0.7
2,726,285 + ECD_02612 0.79 -0.2
2,726,286 - ECD_02612 0.79 -1.4
2,726,286 - ECD_02612 0.79 +0.2
2,726,286 - ECD_02612 0.79 +0.2
2,726,286 - ECD_02612 0.79 -1.3
2,726,286 - ECD_02612 0.79 +0.9
2,726,286 - ECD_02612 0.79 -0.4
2,726,326 + -0.9
2,726,327 - +0.6
2,726,342 + -1.0
2,726,342 + -0.4
2,726,342 + -0.6
2,726,342 + -0.5
2,726,343 - +0.5
2,726,343 - -0.3
2,726,343 - -1.6
2,726,343 - +0.9
2,726,343 - -1.4
2,726,343 - +0.1
2,726,343 - +0.5
2,726,351 + -0.5
2,726,352 - +0.3
2,726,352 - -1.6
2,726,356 + -0.7
2,726,367 + -2.1
2,726,367 + +0.0
2,726,368 - -1.2
2,726,411 - +1.0
2,726,453 - ECD_02613 0.17 +0.6
2,726,453 - ECD_02613 0.17 +0.9
2,726,453 - ECD_02613 0.17 -0.1
2,726,489 - ECD_02613 0.23 +0.7
2,726,489 - ECD_02613 0.23 +0.9
2,726,489 - ECD_02613 0.23 -1.2
2,726,489 - ECD_02613 0.23 -0.1
2,726,498 - ECD_02613 0.24 -1.5
2,726,506 + ECD_02613 0.26 -2.5
2,726,506 + ECD_02613 0.26 -0.4
2,726,563 + ECD_02613 0.36 -0.1
2,726,563 + ECD_02613 0.36 -0.8
2,726,563 + ECD_02613 0.36 +0.1
2,726,563 + ECD_02613 0.36 +0.3
2,726,668 + ECD_02613 0.54 +0.2
2,726,669 - ECD_02613 0.54 -1.8
2,726,746 + ECD_02613 0.68 -1.8
2,726,768 - ECD_02613 0.71 +0.8
2,726,855 - ECD_02613 0.86 -0.9
2,727,025 - +0.5
2,727,034 - +1.0
2,727,056 + -1.4
2,727,057 - +0.5
2,727,082 - +0.6
2,727,212 - ECD_02614 0.15 +0.5
2,727,212 - ECD_02614 0.15 +0.1
2,727,262 + ECD_02614 0.21 -0.9
2,727,262 + ECD_02614 0.21 +0.5
2,727,262 + ECD_02614 0.21 -0.1
2,727,262 + ECD_02614 0.21 -0.6
2,727,262 + ECD_02614 0.21 +0.5
2,727,262 + ECD_02614 0.21 +1.6
2,727,263 - ECD_02614 0.21 +0.5
2,727,263 - ECD_02614 0.21 -0.7
2,727,263 - ECD_02614 0.21 -0.1
2,727,263 - ECD_02614 0.21 +1.1
2,727,263 - ECD_02614 0.21 +0.6
2,727,263 - ECD_02614 0.21 +2.0
2,727,263 - ECD_02614 0.21 +0.4
2,727,348 + ECD_02614 0.31 +1.2
2,727,349 - ECD_02614 0.31 +1.3
2,727,349 - ECD_02614 0.31 +1.0
2,727,383 - ECD_02614 0.35 +1.1
2,727,398 - ECD_02614 0.37 +0.4
2,727,657 - ECD_02614 0.67 +1.0
2,727,667 + ECD_02614 0.68 +0.1
2,727,668 - ECD_02614 0.68 +0.7
2,727,668 - ECD_02614 0.68 -1.8
2,727,668 - ECD_02614 0.68 +0.7
2,727,668 - ECD_02614 0.68 +0.3
2,727,671 + ECD_02614 0.69 +1.3
2,727,671 + ECD_02614 0.69 +0.9
2,727,672 - ECD_02614 0.69 +0.7
2,727,704 + ECD_02614 0.72 -0.3
2,727,704 + ECD_02614 0.72 -0.5
2,727,704 + ECD_02614 0.72 -1.3
2,727,704 + ECD_02614 0.72 -0.2
2,727,705 - ECD_02614 0.73 +0.3
2,727,705 - ECD_02614 0.73 +2.3
2,727,705 - ECD_02614 0.73 +0.4
2,727,705 - ECD_02614 0.73 -1.7
2,727,705 - ECD_02614 0.73 +2.1
2,727,825 - ECD_02614 0.87 +1.4
2,727,859 + -2.9
2,727,859 + +0.2
2,727,860 - -0.4
2,727,896 + -1.7
2,727,897 - +0.9
2,727,897 - -0.9
2,727,897 - -0.9
2,727,918 - +0.3
2,727,918 - -0.2
2,727,918 - +1.1
2,727,918 - -0.5
2,727,918 - +0.0

Or see this region's nucleotide sequence