Strain Fitness in Escherichia coli BL21 around ECD_02600

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02597 and ECD_02598 are separated by 18 nucleotidesECD_02598 and ECD_02599 are separated by 193 nucleotidesECD_02599 and ECD_02600 are separated by 49 nucleotidesECD_02600 and ECD_02601 overlap by 1 nucleotides ECD_02597: ECD_02597 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, at 2,711,748 to 2,712,458 _02597 ECD_02598: ECD_02598 - cell division protein, at 2,712,477 to 2,712,788 _02598 ECD_02599: ECD_02599 - DUF3561 family inner membrane protein, at 2,712,982 to 2,713,305 _02599 ECD_02600: ECD_02600 - adenosine 5'-phosphosulfate kinase, at 2,713,355 to 2,713,960 _02600 ECD_02601: ECD_02601 - sulfate adenylyltransferase, subunit 1, at 2,713,960 to 2,715,387 _02601 Position (kb) 2713 2714Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 2712.479 kb on - strandat 2712.840 kb on - strandat 2712.840 kb on - strandat 2712.840 kb on - strandat 2712.840 kb on - strandat 2712.840 kb on - strandat 2712.840 kb on - strandat 2712.840 kb on - strandat 2712.840 kb on - strandat 2712.881 kb on - strandat 2712.899 kb on + strandat 2712.899 kb on + strandat 2712.899 kb on + strandat 2712.900 kb on - strandat 2712.900 kb on - strandat 2712.900 kb on - strandat 2712.900 kb on - strandat 2712.903 kb on + strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.904 kb on - strandat 2712.925 kb on + strandat 2712.925 kb on + strandat 2712.926 kb on - strandat 2712.926 kb on - strandat 2712.926 kb on - strandat 2712.926 kb on - strandat 2712.926 kb on - strandat 2712.926 kb on - strandat 2712.926 kb on - strandat 2712.926 kb on - strandat 2712.926 kb on - strandat 2712.934 kb on + strandat 2712.937 kb on + strandat 2712.937 kb on + strandat 2712.938 kb on - strandat 2712.938 kb on - strandat 2712.938 kb on - strandat 2712.938 kb on - strandat 2712.941 kb on + strandat 2712.942 kb on - strandat 2712.953 kb on + strandat 2712.976 kb on + strandat 2712.977 kb on - strandat 2712.999 kb on + strandat 2712.999 kb on + strandat 2713.000 kb on - strandat 2713.000 kb on - strandat 2713.017 kb on + strand, within ECD_02599at 2713.017 kb on + strand, within ECD_02599at 2713.017 kb on + strand, within ECD_02599at 2713.018 kb on - strand, within ECD_02599at 2713.018 kb on - strand, within ECD_02599at 2713.025 kb on - strand, within ECD_02599at 2713.047 kb on + strand, within ECD_02599at 2713.047 kb on + strand, within ECD_02599at 2713.052 kb on + strand, within ECD_02599at 2713.052 kb on + strand, within ECD_02599at 2713.052 kb on + strand, within ECD_02599at 2713.052 kb on + strand, within ECD_02599at 2713.052 kb on + strand, within ECD_02599at 2713.052 kb on + strand, within ECD_02599at 2713.052 kb on + strand, within ECD_02599at 2713.053 kb on - strand, within ECD_02599at 2713.057 kb on + strand, within ECD_02599at 2713.058 kb on - strand, within ECD_02599at 2713.058 kb on - strand, within ECD_02599at 2713.058 kb on - strand, within ECD_02599at 2713.139 kb on + strand, within ECD_02599at 2713.139 kb on + strand, within ECD_02599at 2713.139 kb on + strand, within ECD_02599at 2713.140 kb on - strand, within ECD_02599at 2713.140 kb on - strand, within ECD_02599at 2713.140 kb on - strand, within ECD_02599at 2713.140 kb on - strand, within ECD_02599at 2713.140 kb on - strand, within ECD_02599at 2713.143 kb on + strand, within ECD_02599at 2713.144 kb on - strand, within ECD_02599at 2713.169 kb on + strand, within ECD_02599at 2713.169 kb on + strand, within ECD_02599at 2713.169 kb on + strand, within ECD_02599at 2713.169 kb on + strand, within ECD_02599at 2713.170 kb on - strand, within ECD_02599at 2713.170 kb on - strand, within ECD_02599at 2713.170 kb on - strand, within ECD_02599at 2713.198 kb on + strand, within ECD_02599at 2713.209 kb on + strand, within ECD_02599at 2713.279 kb on + strandat 2713.284 kb on + strandat 2713.284 kb on + strandat 2713.284 kb on + strandat 2713.284 kb on + strandat 2713.284 kb on + strandat 2713.285 kb on - strandat 2713.285 kb on - strandat 2713.285 kb on - strandat 2713.285 kb on - strandat 2713.285 kb on - strandat 2713.290 kb on + strandat 2713.296 kb on + strandat 2713.297 kb on - strandat 2713.299 kb on + strandat 2713.300 kb on - strandat 2713.305 kb on + strandat 2713.305 kb on + strandat 2713.306 kb on - strandat 2713.306 kb on - strandat 2713.306 kb on - strandat 2713.318 kb on + strandat 2713.318 kb on + strandat 2713.319 kb on - strandat 2713.367 kb on - strandat 2713.419 kb on - strand, within ECD_02600at 2713.475 kb on + strand, within ECD_02600at 2713.516 kb on + strand, within ECD_02600at 2713.516 kb on + strand, within ECD_02600at 2713.517 kb on - strand, within ECD_02600at 2713.517 kb on - strand, within ECD_02600at 2713.517 kb on - strand, within ECD_02600at 2713.517 kb on - strand, within ECD_02600at 2713.518 kb on + strand, within ECD_02600at 2713.518 kb on + strand, within ECD_02600at 2713.518 kb on + strand, within ECD_02600at 2713.519 kb on - strand, within ECD_02600at 2713.519 kb on - strand, within ECD_02600at 2713.519 kb on - strand, within ECD_02600at 2713.520 kb on + strand, within ECD_02600at 2713.521 kb on - strand, within ECD_02600at 2713.640 kb on - strand, within ECD_02600at 2713.640 kb on - strand, within ECD_02600at 2713.730 kb on - strand, within ECD_02600at 2713.748 kb on + strand, within ECD_02600at 2713.782 kb on + strand, within ECD_02600at 2713.782 kb on + strand, within ECD_02600at 2713.782 kb on + strand, within ECD_02600at 2713.782 kb on + strand, within ECD_02600at 2713.782 kb on + strand, within ECD_02600at 2713.782 kb on + strand, within ECD_02600at 2713.783 kb on - strand, within ECD_02600at 2713.783 kb on - strand, within ECD_02600at 2713.783 kb on - strand, within ECD_02600at 2713.783 kb on - strand, within ECD_02600at 2713.783 kb on - strand, within ECD_02600at 2713.783 kb on - strand, within ECD_02600at 2713.783 kb on - strand, within ECD_02600at 2713.786 kb on + strand, within ECD_02600at 2713.786 kb on + strand, within ECD_02600at 2713.786 kb on + strand, within ECD_02600at 2713.787 kb on - strand, within ECD_02600at 2713.787 kb on - strand, within ECD_02600at 2713.801 kb on + strand, within ECD_02600at 2713.805 kb on + strand, within ECD_02600at 2713.805 kb on + strand, within ECD_02600at 2713.805 kb on + strand, within ECD_02600at 2713.805 kb on + strand, within ECD_02600at 2713.806 kb on - strand, within ECD_02600at 2713.806 kb on - strand, within ECD_02600at 2713.806 kb on - strand, within ECD_02600at 2713.874 kb on + strand, within ECD_02600at 2713.874 kb on + strand, within ECD_02600at 2713.874 kb on + strand, within ECD_02600at 2713.874 kb on + strand, within ECD_02600at 2713.874 kb on + strand, within ECD_02600at 2713.874 kb on + strand, within ECD_02600at 2713.875 kb on - strand, within ECD_02600at 2713.875 kb on - strand, within ECD_02600at 2713.875 kb on - strand, within ECD_02600at 2713.875 kb on - strand, within ECD_02600at 2713.875 kb on - strand, within ECD_02600at 2713.895 kb on + strand, within ECD_02600at 2713.895 kb on + strand, within ECD_02600at 2713.895 kb on + strand, within ECD_02600at 2713.896 kb on - strand, within ECD_02600at 2713.961 kb on + strandat 2713.962 kb on - strandat 2713.962 kb on - strandat 2713.966 kb on - strandat 2713.966 kb on - strandat 2714.171 kb on - strand, within ECD_02601at 2714.171 kb on - strand, within ECD_02601at 2714.171 kb on - strand, within ECD_02601at 2714.260 kb on - strand, within ECD_02601at 2714.324 kb on + strand, within ECD_02601at 2714.324 kb on + strand, within ECD_02601at 2714.325 kb on - strand, within ECD_02601at 2714.573 kb on - strand, within ECD_02601at 2714.601 kb on - strand, within ECD_02601at 2714.601 kb on - strand, within ECD_02601at 2714.634 kb on - strand, within ECD_02601at 2714.634 kb on - strand, within ECD_02601at 2714.721 kb on - strand, within ECD_02601at 2714.800 kb on - strand, within ECD_02601at 2714.800 kb on - strand, within ECD_02601at 2714.828 kb on + strand, within ECD_02601at 2714.842 kb on - strand, within ECD_02601at 2714.865 kb on - strand, within ECD_02601at 2714.928 kb on + strand, within ECD_02601at 2714.929 kb on - strand, within ECD_02601at 2714.929 kb on - strand, within ECD_02601

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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2,712,479 - -1.0
2,712,840 - -0.3
2,712,840 - -1.1
2,712,840 - +0.8
2,712,840 - +0.8
2,712,840 - -0.3
2,712,840 - -1.0
2,712,840 - +0.5
2,712,840 - +1.5
2,712,881 - -0.1
2,712,899 + -0.3
2,712,899 + -1.4
2,712,899 + -1.4
2,712,900 - +0.6
2,712,900 - -1.4
2,712,900 - +0.7
2,712,900 - -0.3
2,712,903 + -2.9
2,712,904 - -2.5
2,712,904 - -1.5
2,712,904 - -1.9
2,712,904 - -1.4
2,712,904 - -0.2
2,712,904 - -0.2
2,712,904 - -0.1
2,712,904 - -0.6
2,712,904 - -0.5
2,712,904 - -2.1
2,712,904 - +1.0
2,712,904 - -0.3
2,712,904 - +1.3
2,712,904 - -0.8
2,712,904 - -0.8
2,712,925 + -0.5
2,712,925 + -1.8
2,712,926 - -0.5
2,712,926 - -1.0
2,712,926 - -1.8
2,712,926 - +0.5
2,712,926 - -1.0
2,712,926 - +1.0
2,712,926 - -0.4
2,712,926 - -0.3
2,712,926 - +1.4
2,712,934 + -0.0
2,712,937 + -0.9
2,712,937 + +0.1
2,712,938 - +1.1
2,712,938 - -0.2
2,712,938 - -0.5
2,712,938 - -1.0
2,712,941 + -0.6
2,712,942 - -1.0
2,712,953 + -0.6
2,712,976 + -0.5
2,712,977 - +0.4
2,712,999 + +1.1
2,712,999 + +1.3
2,713,000 - -0.8
2,713,000 - -1.2
2,713,017 + ECD_02599 0.11 -0.6
2,713,017 + ECD_02599 0.11 +0.1
2,713,017 + ECD_02599 0.11 +1.4
2,713,018 - ECD_02599 0.11 -2.0
2,713,018 - ECD_02599 0.11 +0.1
2,713,025 - ECD_02599 0.13 +0.7
2,713,047 + ECD_02599 0.20 -0.1
2,713,047 + ECD_02599 0.20 -1.3
2,713,052 + ECD_02599 0.22 +0.7
2,713,052 + ECD_02599 0.22 +0.1
2,713,052 + ECD_02599 0.22 -0.0
2,713,052 + ECD_02599 0.22 -0.2
2,713,052 + ECD_02599 0.22 -1.2
2,713,052 + ECD_02599 0.22 -2.1
2,713,052 + ECD_02599 0.22 -1.5
2,713,053 - ECD_02599 0.22 +0.3
2,713,057 + ECD_02599 0.23 +0.9
2,713,058 - ECD_02599 0.23 -0.5
2,713,058 - ECD_02599 0.23 -2.4
2,713,058 - ECD_02599 0.23 +0.4
2,713,139 + ECD_02599 0.48 +0.2
2,713,139 + ECD_02599 0.48 -1.0
2,713,139 + ECD_02599 0.48 +0.3
2,713,140 - ECD_02599 0.49 -0.1
2,713,140 - ECD_02599 0.49 +0.7
2,713,140 - ECD_02599 0.49 -0.6
2,713,140 - ECD_02599 0.49 -1.7
2,713,140 - ECD_02599 0.49 -0.8
2,713,143 + ECD_02599 0.50 +0.2
2,713,144 - ECD_02599 0.50 -1.4
2,713,169 + ECD_02599 0.58 +0.1
2,713,169 + ECD_02599 0.58 -0.1
2,713,169 + ECD_02599 0.58 -0.4
2,713,169 + ECD_02599 0.58 -0.8
2,713,170 - ECD_02599 0.58 -0.9
2,713,170 - ECD_02599 0.58 -1.0
2,713,170 - ECD_02599 0.58 -0.5
2,713,198 + ECD_02599 0.67 -1.0
2,713,209 + ECD_02599 0.70 -1.6
2,713,279 + +0.9
2,713,284 + -0.3
2,713,284 + -0.3
2,713,284 + +1.0
2,713,284 + +0.2
2,713,284 + +0.5
2,713,285 - -0.2
2,713,285 - -0.9
2,713,285 - -2.0
2,713,285 - -0.2
2,713,285 - -2.5
2,713,290 + +0.1
2,713,296 + +0.1
2,713,297 - -0.8
2,713,299 + +0.8
2,713,300 - +1.1
2,713,305 + -1.3
2,713,305 + +0.5
2,713,306 - -0.5
2,713,306 - -0.0
2,713,306 - -1.4
2,713,318 + +0.3
2,713,318 + -0.7
2,713,319 - -0.6
2,713,367 - -0.4
2,713,419 - ECD_02600 0.11 -0.9
2,713,475 + ECD_02600 0.20 -1.7
2,713,516 + ECD_02600 0.27 -1.5
2,713,516 + ECD_02600 0.27 -1.7
2,713,517 - ECD_02600 0.27 +2.7
2,713,517 - ECD_02600 0.27 -1.4
2,713,517 - ECD_02600 0.27 +0.6
2,713,517 - ECD_02600 0.27 -0.7
2,713,518 + ECD_02600 0.27 +1.3
2,713,518 + ECD_02600 0.27 -0.0
2,713,518 + ECD_02600 0.27 +0.1
2,713,519 - ECD_02600 0.27 +1.3
2,713,519 - ECD_02600 0.27 -1.2
2,713,519 - ECD_02600 0.27 -0.0
2,713,520 + ECD_02600 0.27 +2.3
2,713,521 - ECD_02600 0.27 -0.9
2,713,640 - ECD_02600 0.47 +0.3
2,713,640 - ECD_02600 0.47 -1.2
2,713,730 - ECD_02600 0.62 +0.8
2,713,748 + ECD_02600 0.65 +2.3
2,713,782 + ECD_02600 0.70 -0.0
2,713,782 + ECD_02600 0.70 -0.5
2,713,782 + ECD_02600 0.70 +0.2
2,713,782 + ECD_02600 0.70 -0.6
2,713,782 + ECD_02600 0.70 +1.6
2,713,782 + ECD_02600 0.70 +6.2
2,713,783 - ECD_02600 0.71 -0.9
2,713,783 - ECD_02600 0.71 +0.4
2,713,783 - ECD_02600 0.71 -0.5
2,713,783 - ECD_02600 0.71 +1.5
2,713,783 - ECD_02600 0.71 -0.7
2,713,783 - ECD_02600 0.71 -0.4
2,713,783 - ECD_02600 0.71 -1.0
2,713,786 + ECD_02600 0.71 +1.6
2,713,786 + ECD_02600 0.71 +2.3
2,713,786 + ECD_02600 0.71 +1.5
2,713,787 - ECD_02600 0.71 +1.0
2,713,787 - ECD_02600 0.71 -1.7
2,713,801 + ECD_02600 0.74 +1.0
2,713,805 + ECD_02600 0.74 +1.5
2,713,805 + ECD_02600 0.74 -0.0
2,713,805 + ECD_02600 0.74 +0.1
2,713,805 + ECD_02600 0.74 -1.0
2,713,806 - ECD_02600 0.74 +2.0
2,713,806 - ECD_02600 0.74 +1.1
2,713,806 - ECD_02600 0.74 +0.9
2,713,874 + ECD_02600 0.86 +0.7
2,713,874 + ECD_02600 0.86 -0.0
2,713,874 + ECD_02600 0.86 +0.2
2,713,874 + ECD_02600 0.86 +1.5
2,713,874 + ECD_02600 0.86 +1.9
2,713,874 + ECD_02600 0.86 +1.3
2,713,875 - ECD_02600 0.86 +0.1
2,713,875 - ECD_02600 0.86 -0.6
2,713,875 - ECD_02600 0.86 -0.0
2,713,875 - ECD_02600 0.86 -1.3
2,713,875 - ECD_02600 0.86 +0.7
2,713,895 + ECD_02600 0.89 +2.6
2,713,895 + ECD_02600 0.89 +0.5
2,713,895 + ECD_02600 0.89 +1.5
2,713,896 - ECD_02600 0.89 +0.0
2,713,961 + +0.6
2,713,962 - -1.2
2,713,962 - -1.3
2,713,966 - +0.3
2,713,966 - +0.3
2,714,171 - ECD_02601 0.15 +1.2
2,714,171 - ECD_02601 0.15 +0.7
2,714,171 - ECD_02601 0.15 +0.3
2,714,260 - ECD_02601 0.21 +0.0
2,714,324 + ECD_02601 0.25 -2.4
2,714,324 + ECD_02601 0.25 +1.0
2,714,325 - ECD_02601 0.26 +1.4
2,714,573 - ECD_02601 0.43 -0.0
2,714,601 - ECD_02601 0.45 -0.4
2,714,601 - ECD_02601 0.45 +4.8
2,714,634 - ECD_02601 0.47 +0.2
2,714,634 - ECD_02601 0.47 -0.0
2,714,721 - ECD_02601 0.53 -0.7
2,714,800 - ECD_02601 0.59 -0.1
2,714,800 - ECD_02601 0.59 +1.3
2,714,828 + ECD_02601 0.61 -2.4
2,714,842 - ECD_02601 0.62 -1.2
2,714,865 - ECD_02601 0.63 +1.8
2,714,928 + ECD_02601 0.68 -1.4
2,714,929 - ECD_02601 0.68 +0.5
2,714,929 - ECD_02601 0.68 -2.5

Or see this region's nucleotide sequence