Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02597 and ECD_02598 are separated by 18 nucleotides ECD_02598 and ECD_02599 are separated by 193 nucleotides ECD_02599 and ECD_02600 are separated by 49 nucleotides ECD_02600 and ECD_02601 overlap by 1 nucleotides
ECD_02597: ECD_02597 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, at 2,711,748 to 2,712,458
_02597
ECD_02598: ECD_02598 - cell division protein, at 2,712,477 to 2,712,788
_02598
ECD_02599: ECD_02599 - DUF3561 family inner membrane protein, at 2,712,982 to 2,713,305
_02599
ECD_02600: ECD_02600 - adenosine 5'-phosphosulfate kinase, at 2,713,355 to 2,713,960
_02600
ECD_02601: ECD_02601 - sulfate adenylyltransferase, subunit 1, at 2,713,960 to 2,715,387
_02601
Position (kb)
2713
2714 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 2712.479 kb on - strand at 2712.840 kb on - strand at 2712.840 kb on - strand at 2712.840 kb on - strand at 2712.840 kb on - strand at 2712.840 kb on - strand at 2712.840 kb on - strand at 2712.840 kb on - strand at 2712.840 kb on - strand at 2712.881 kb on - strand at 2712.899 kb on + strand at 2712.899 kb on + strand at 2712.899 kb on + strand at 2712.900 kb on - strand at 2712.900 kb on - strand at 2712.900 kb on - strand at 2712.900 kb on - strand at 2712.903 kb on + strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.904 kb on - strand at 2712.925 kb on + strand at 2712.925 kb on + strand at 2712.926 kb on - strand at 2712.926 kb on - strand at 2712.926 kb on - strand at 2712.926 kb on - strand at 2712.926 kb on - strand at 2712.926 kb on - strand at 2712.926 kb on - strand at 2712.926 kb on - strand at 2712.926 kb on - strand at 2712.934 kb on + strand at 2712.937 kb on + strand at 2712.937 kb on + strand at 2712.938 kb on - strand at 2712.938 kb on - strand at 2712.938 kb on - strand at 2712.938 kb on - strand at 2712.941 kb on + strand at 2712.942 kb on - strand at 2712.953 kb on + strand at 2712.976 kb on + strand at 2712.977 kb on - strand at 2712.999 kb on + strand at 2712.999 kb on + strand at 2713.000 kb on - strand at 2713.000 kb on - strand at 2713.017 kb on + strand, within ECD_02599 at 2713.017 kb on + strand, within ECD_02599 at 2713.017 kb on + strand, within ECD_02599 at 2713.018 kb on - strand, within ECD_02599 at 2713.018 kb on - strand, within ECD_02599 at 2713.025 kb on - strand, within ECD_02599 at 2713.047 kb on + strand, within ECD_02599 at 2713.047 kb on + strand, within ECD_02599 at 2713.052 kb on + strand, within ECD_02599 at 2713.052 kb on + strand, within ECD_02599 at 2713.052 kb on + strand, within ECD_02599 at 2713.052 kb on + strand, within ECD_02599 at 2713.052 kb on + strand, within ECD_02599 at 2713.052 kb on + strand, within ECD_02599 at 2713.052 kb on + strand, within ECD_02599 at 2713.053 kb on - strand, within ECD_02599 at 2713.057 kb on + strand, within ECD_02599 at 2713.058 kb on - strand, within ECD_02599 at 2713.058 kb on - strand, within ECD_02599 at 2713.058 kb on - strand, within ECD_02599 at 2713.139 kb on + strand, within ECD_02599 at 2713.139 kb on + strand, within ECD_02599 at 2713.139 kb on + strand, within ECD_02599 at 2713.140 kb on - strand, within ECD_02599 at 2713.140 kb on - strand, within ECD_02599 at 2713.140 kb on - strand, within ECD_02599 at 2713.140 kb on - strand, within ECD_02599 at 2713.140 kb on - strand, within ECD_02599 at 2713.143 kb on + strand, within ECD_02599 at 2713.144 kb on - strand, within ECD_02599 at 2713.169 kb on + strand, within ECD_02599 at 2713.169 kb on + strand, within ECD_02599 at 2713.169 kb on + strand, within ECD_02599 at 2713.169 kb on + strand, within ECD_02599 at 2713.170 kb on - strand, within ECD_02599 at 2713.170 kb on - strand, within ECD_02599 at 2713.170 kb on - strand, within ECD_02599 at 2713.198 kb on + strand, within ECD_02599 at 2713.209 kb on + strand, within ECD_02599 at 2713.279 kb on + strand at 2713.284 kb on + strand at 2713.284 kb on + strand at 2713.284 kb on + strand at 2713.284 kb on + strand at 2713.284 kb on + strand at 2713.285 kb on - strand at 2713.285 kb on - strand at 2713.285 kb on - strand at 2713.285 kb on - strand at 2713.285 kb on - strand at 2713.290 kb on + strand at 2713.296 kb on + strand at 2713.297 kb on - strand at 2713.299 kb on + strand at 2713.300 kb on - strand at 2713.305 kb on + strand at 2713.305 kb on + strand at 2713.306 kb on - strand at 2713.306 kb on - strand at 2713.306 kb on - strand at 2713.318 kb on + strand at 2713.318 kb on + strand at 2713.319 kb on - strand at 2713.367 kb on - strand at 2713.419 kb on - strand, within ECD_02600 at 2713.475 kb on + strand, within ECD_02600 at 2713.516 kb on + strand, within ECD_02600 at 2713.516 kb on + strand, within ECD_02600 at 2713.517 kb on - strand, within ECD_02600 at 2713.517 kb on - strand, within ECD_02600 at 2713.517 kb on - strand, within ECD_02600 at 2713.517 kb on - strand, within ECD_02600 at 2713.518 kb on + strand, within ECD_02600 at 2713.518 kb on + strand, within ECD_02600 at 2713.518 kb on + strand, within ECD_02600 at 2713.519 kb on - strand, within ECD_02600 at 2713.519 kb on - strand, within ECD_02600 at 2713.519 kb on - strand, within ECD_02600 at 2713.520 kb on + strand, within ECD_02600 at 2713.521 kb on - strand, within ECD_02600 at 2713.640 kb on - strand, within ECD_02600 at 2713.640 kb on - strand, within ECD_02600 at 2713.730 kb on - strand, within ECD_02600 at 2713.748 kb on + strand, within ECD_02600 at 2713.782 kb on + strand, within ECD_02600 at 2713.782 kb on + strand, within ECD_02600 at 2713.782 kb on + strand, within ECD_02600 at 2713.782 kb on + strand, within ECD_02600 at 2713.782 kb on + strand, within ECD_02600 at 2713.782 kb on + strand, within ECD_02600 at 2713.783 kb on - strand, within ECD_02600 at 2713.783 kb on - strand, within ECD_02600 at 2713.783 kb on - strand, within ECD_02600 at 2713.783 kb on - strand, within ECD_02600 at 2713.783 kb on - strand, within ECD_02600 at 2713.783 kb on - strand, within ECD_02600 at 2713.783 kb on - strand, within ECD_02600 at 2713.786 kb on + strand, within ECD_02600 at 2713.786 kb on + strand, within ECD_02600 at 2713.786 kb on + strand, within ECD_02600 at 2713.787 kb on - strand, within ECD_02600 at 2713.787 kb on - strand, within ECD_02600 at 2713.801 kb on + strand, within ECD_02600 at 2713.805 kb on + strand, within ECD_02600 at 2713.805 kb on + strand, within ECD_02600 at 2713.805 kb on + strand, within ECD_02600 at 2713.805 kb on + strand, within ECD_02600 at 2713.806 kb on - strand, within ECD_02600 at 2713.806 kb on - strand, within ECD_02600 at 2713.806 kb on - strand, within ECD_02600 at 2713.874 kb on + strand, within ECD_02600 at 2713.874 kb on + strand, within ECD_02600 at 2713.874 kb on + strand, within ECD_02600 at 2713.874 kb on + strand, within ECD_02600 at 2713.874 kb on + strand, within ECD_02600 at 2713.874 kb on + strand, within ECD_02600 at 2713.875 kb on - strand, within ECD_02600 at 2713.875 kb on - strand, within ECD_02600 at 2713.875 kb on - strand, within ECD_02600 at 2713.875 kb on - strand, within ECD_02600 at 2713.875 kb on - strand, within ECD_02600 at 2713.895 kb on + strand, within ECD_02600 at 2713.895 kb on + strand, within ECD_02600 at 2713.895 kb on + strand, within ECD_02600 at 2713.896 kb on - strand, within ECD_02600 at 2713.961 kb on + strand at 2713.962 kb on - strand at 2713.962 kb on - strand at 2713.966 kb on - strand at 2713.966 kb on - strand at 2714.171 kb on - strand, within ECD_02601 at 2714.171 kb on - strand, within ECD_02601 at 2714.171 kb on - strand, within ECD_02601 at 2714.260 kb on - strand, within ECD_02601 at 2714.324 kb on + strand, within ECD_02601 at 2714.324 kb on + strand, within ECD_02601 at 2714.325 kb on - strand, within ECD_02601 at 2714.573 kb on - strand, within ECD_02601 at 2714.601 kb on - strand, within ECD_02601 at 2714.601 kb on - strand, within ECD_02601 at 2714.634 kb on - strand, within ECD_02601 at 2714.634 kb on - strand, within ECD_02601 at 2714.721 kb on - strand, within ECD_02601 at 2714.800 kb on - strand, within ECD_02601 at 2714.800 kb on - strand, within ECD_02601 at 2714.828 kb on + strand, within ECD_02601 at 2714.842 kb on - strand, within ECD_02601 at 2714.865 kb on - strand, within ECD_02601 at 2714.928 kb on + strand, within ECD_02601 at 2714.929 kb on - strand, within ECD_02601 at 2714.929 kb on - strand, within ECD_02601
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 2,712,479 - -1.0 2,712,840 - -0.3 2,712,840 - -1.1 2,712,840 - +0.8 2,712,840 - +0.8 2,712,840 - -0.3 2,712,840 - -1.0 2,712,840 - +0.5 2,712,840 - +1.5 2,712,881 - -0.1 2,712,899 + -0.3 2,712,899 + -1.4 2,712,899 + -1.4 2,712,900 - +0.6 2,712,900 - -1.4 2,712,900 - +0.7 2,712,900 - -0.3 2,712,903 + -2.9 2,712,904 - -2.5 2,712,904 - -1.5 2,712,904 - -1.9 2,712,904 - -1.4 2,712,904 - -0.2 2,712,904 - -0.2 2,712,904 - -0.1 2,712,904 - -0.6 2,712,904 - -0.5 2,712,904 - -2.1 2,712,904 - +1.0 2,712,904 - -0.3 2,712,904 - +1.3 2,712,904 - -0.8 2,712,904 - -0.8 2,712,925 + -0.5 2,712,925 + -1.8 2,712,926 - -0.5 2,712,926 - -1.0 2,712,926 - -1.8 2,712,926 - +0.5 2,712,926 - -1.0 2,712,926 - +1.0 2,712,926 - -0.4 2,712,926 - -0.3 2,712,926 - +1.4 2,712,934 + -0.0 2,712,937 + -0.9 2,712,937 + +0.1 2,712,938 - +1.1 2,712,938 - -0.2 2,712,938 - -0.5 2,712,938 - -1.0 2,712,941 + -0.6 2,712,942 - -1.0 2,712,953 + -0.6 2,712,976 + -0.5 2,712,977 - +0.4 2,712,999 + +1.1 2,712,999 + +1.3 2,713,000 - -0.8 2,713,000 - -1.2 2,713,017 + ECD_02599 0.11 -0.6 2,713,017 + ECD_02599 0.11 +0.1 2,713,017 + ECD_02599 0.11 +1.4 2,713,018 - ECD_02599 0.11 -2.0 2,713,018 - ECD_02599 0.11 +0.1 2,713,025 - ECD_02599 0.13 +0.7 2,713,047 + ECD_02599 0.20 -0.1 2,713,047 + ECD_02599 0.20 -1.3 2,713,052 + ECD_02599 0.22 +0.7 2,713,052 + ECD_02599 0.22 +0.1 2,713,052 + ECD_02599 0.22 -0.0 2,713,052 + ECD_02599 0.22 -0.2 2,713,052 + ECD_02599 0.22 -1.2 2,713,052 + ECD_02599 0.22 -2.1 2,713,052 + ECD_02599 0.22 -1.5 2,713,053 - ECD_02599 0.22 +0.3 2,713,057 + ECD_02599 0.23 +0.9 2,713,058 - ECD_02599 0.23 -0.5 2,713,058 - ECD_02599 0.23 -2.4 2,713,058 - ECD_02599 0.23 +0.4 2,713,139 + ECD_02599 0.48 +0.2 2,713,139 + ECD_02599 0.48 -1.0 2,713,139 + ECD_02599 0.48 +0.3 2,713,140 - ECD_02599 0.49 -0.1 2,713,140 - ECD_02599 0.49 +0.7 2,713,140 - ECD_02599 0.49 -0.6 2,713,140 - ECD_02599 0.49 -1.7 2,713,140 - ECD_02599 0.49 -0.8 2,713,143 + ECD_02599 0.50 +0.2 2,713,144 - ECD_02599 0.50 -1.4 2,713,169 + ECD_02599 0.58 +0.1 2,713,169 + ECD_02599 0.58 -0.1 2,713,169 + ECD_02599 0.58 -0.4 2,713,169 + ECD_02599 0.58 -0.8 2,713,170 - ECD_02599 0.58 -0.9 2,713,170 - ECD_02599 0.58 -1.0 2,713,170 - ECD_02599 0.58 -0.5 2,713,198 + ECD_02599 0.67 -1.0 2,713,209 + ECD_02599 0.70 -1.6 2,713,279 + +0.9 2,713,284 + -0.3 2,713,284 + -0.3 2,713,284 + +1.0 2,713,284 + +0.2 2,713,284 + +0.5 2,713,285 - -0.2 2,713,285 - -0.9 2,713,285 - -2.0 2,713,285 - -0.2 2,713,285 - -2.5 2,713,290 + +0.1 2,713,296 + +0.1 2,713,297 - -0.8 2,713,299 + +0.8 2,713,300 - +1.1 2,713,305 + -1.3 2,713,305 + +0.5 2,713,306 - -0.5 2,713,306 - -0.0 2,713,306 - -1.4 2,713,318 + +0.3 2,713,318 + -0.7 2,713,319 - -0.6 2,713,367 - -0.4 2,713,419 - ECD_02600 0.11 -0.9 2,713,475 + ECD_02600 0.20 -1.7 2,713,516 + ECD_02600 0.27 -1.5 2,713,516 + ECD_02600 0.27 -1.7 2,713,517 - ECD_02600 0.27 +2.7 2,713,517 - ECD_02600 0.27 -1.4 2,713,517 - ECD_02600 0.27 +0.6 2,713,517 - ECD_02600 0.27 -0.7 2,713,518 + ECD_02600 0.27 +1.3 2,713,518 + ECD_02600 0.27 -0.0 2,713,518 + ECD_02600 0.27 +0.1 2,713,519 - ECD_02600 0.27 +1.3 2,713,519 - ECD_02600 0.27 -1.2 2,713,519 - ECD_02600 0.27 -0.0 2,713,520 + ECD_02600 0.27 +2.3 2,713,521 - ECD_02600 0.27 -0.9 2,713,640 - ECD_02600 0.47 +0.3 2,713,640 - ECD_02600 0.47 -1.2 2,713,730 - ECD_02600 0.62 +0.8 2,713,748 + ECD_02600 0.65 +2.3 2,713,782 + ECD_02600 0.70 -0.0 2,713,782 + ECD_02600 0.70 -0.5 2,713,782 + ECD_02600 0.70 +0.2 2,713,782 + ECD_02600 0.70 -0.6 2,713,782 + ECD_02600 0.70 +1.6 2,713,782 + ECD_02600 0.70 +6.2 2,713,783 - ECD_02600 0.71 -0.9 2,713,783 - ECD_02600 0.71 +0.4 2,713,783 - ECD_02600 0.71 -0.5 2,713,783 - ECD_02600 0.71 +1.5 2,713,783 - ECD_02600 0.71 -0.7 2,713,783 - ECD_02600 0.71 -0.4 2,713,783 - ECD_02600 0.71 -1.0 2,713,786 + ECD_02600 0.71 +1.6 2,713,786 + ECD_02600 0.71 +2.3 2,713,786 + ECD_02600 0.71 +1.5 2,713,787 - ECD_02600 0.71 +1.0 2,713,787 - ECD_02600 0.71 -1.7 2,713,801 + ECD_02600 0.74 +1.0 2,713,805 + ECD_02600 0.74 +1.5 2,713,805 + ECD_02600 0.74 -0.0 2,713,805 + ECD_02600 0.74 +0.1 2,713,805 + ECD_02600 0.74 -1.0 2,713,806 - ECD_02600 0.74 +2.0 2,713,806 - ECD_02600 0.74 +1.1 2,713,806 - ECD_02600 0.74 +0.9 2,713,874 + ECD_02600 0.86 +0.7 2,713,874 + ECD_02600 0.86 -0.0 2,713,874 + ECD_02600 0.86 +0.2 2,713,874 + ECD_02600 0.86 +1.5 2,713,874 + ECD_02600 0.86 +1.9 2,713,874 + ECD_02600 0.86 +1.3 2,713,875 - ECD_02600 0.86 +0.1 2,713,875 - ECD_02600 0.86 -0.6 2,713,875 - ECD_02600 0.86 -0.0 2,713,875 - ECD_02600 0.86 -1.3 2,713,875 - ECD_02600 0.86 +0.7 2,713,895 + ECD_02600 0.89 +2.6 2,713,895 + ECD_02600 0.89 +0.5 2,713,895 + ECD_02600 0.89 +1.5 2,713,896 - ECD_02600 0.89 +0.0 2,713,961 + +0.6 2,713,962 - -1.2 2,713,962 - -1.3 2,713,966 - +0.3 2,713,966 - +0.3 2,714,171 - ECD_02601 0.15 +1.2 2,714,171 - ECD_02601 0.15 +0.7 2,714,171 - ECD_02601 0.15 +0.3 2,714,260 - ECD_02601 0.21 +0.0 2,714,324 + ECD_02601 0.25 -2.4 2,714,324 + ECD_02601 0.25 +1.0 2,714,325 - ECD_02601 0.26 +1.4 2,714,573 - ECD_02601 0.43 -0.0 2,714,601 - ECD_02601 0.45 -0.4 2,714,601 - ECD_02601 0.45 +4.8 2,714,634 - ECD_02601 0.47 +0.2 2,714,634 - ECD_02601 0.47 -0.0 2,714,721 - ECD_02601 0.53 -0.7 2,714,800 - ECD_02601 0.59 -0.1 2,714,800 - ECD_02601 0.59 +1.3 2,714,828 + ECD_02601 0.61 -2.4 2,714,842 - ECD_02601 0.62 -1.2 2,714,865 - ECD_02601 0.63 +1.8 2,714,928 + ECD_02601 0.68 -1.4 2,714,929 - ECD_02601 0.68 +0.5 2,714,929 - ECD_02601 0.68 -2.5
Or see this region's nucleotide sequence