Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02426 and ECD_02427 are separated by 190 nucleotides ECD_02427 and ECD_02428 overlap by 9 nucleotides
ECD_02426: ECD_02426 - putative S9 family prolyl oligopeptidase, at 2,530,195 to 2,531,049
_02426
ECD_02427: ECD_02427 - stationary phase inducible protein, at 2,531,240 to 2,532,520
_02427
ECD_02428: ECD_02428 - putative 3-phenylpropionic transporter, at 2,532,512 to 2,533,651
_02428
Position (kb)
2531
2532
2533 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2530.265 kb on - strand at 2530.265 kb on - strand at 2530.297 kb on + strand, within ECD_02426 at 2530.298 kb on - strand, within ECD_02426 at 2530.465 kb on - strand, within ECD_02426 at 2530.628 kb on + strand, within ECD_02426 at 2530.628 kb on + strand, within ECD_02426 at 2530.629 kb on - strand, within ECD_02426 at 2530.715 kb on + strand, within ECD_02426 at 2530.715 kb on + strand, within ECD_02426 at 2530.751 kb on - strand, within ECD_02426 at 2530.751 kb on - strand, within ECD_02426 at 2530.793 kb on + strand, within ECD_02426 at 2530.794 kb on - strand, within ECD_02426 at 2530.943 kb on + strand, within ECD_02426 at 2531.025 kb on + strand at 2531.048 kb on - strand at 2531.101 kb on - strand at 2531.167 kb on + strand at 2531.218 kb on + strand at 2531.218 kb on + strand at 2531.218 kb on + strand at 2531.218 kb on + strand at 2531.218 kb on + strand at 2531.235 kb on + strand at 2531.248 kb on + strand at 2531.356 kb on + strand at 2531.375 kb on - strand, within ECD_02427 at 2531.390 kb on - strand, within ECD_02427 at 2531.610 kb on - strand, within ECD_02427 at 2531.625 kb on + strand, within ECD_02427 at 2531.626 kb on - strand, within ECD_02427 at 2531.626 kb on - strand, within ECD_02427 at 2531.702 kb on + strand, within ECD_02427 at 2531.711 kb on + strand, within ECD_02427 at 2532.015 kb on + strand, within ECD_02427 at 2532.029 kb on + strand, within ECD_02427 at 2532.029 kb on + strand, within ECD_02427 at 2532.030 kb on - strand, within ECD_02427 at 2532.030 kb on - strand, within ECD_02427 at 2532.030 kb on - strand, within ECD_02427 at 2532.030 kb on - strand, within ECD_02427 at 2532.085 kb on + strand, within ECD_02427 at 2532.114 kb on - strand, within ECD_02427 at 2532.283 kb on + strand, within ECD_02427 at 2532.352 kb on + strand, within ECD_02427 at 2532.353 kb on - strand, within ECD_02427 at 2532.353 kb on - strand, within ECD_02427 at 2532.416 kb on + strand at 2532.416 kb on + strand at 2532.418 kb on + strand at 2532.419 kb on - strand at 2532.597 kb on + strand at 2532.709 kb on + strand, within ECD_02428 at 2532.709 kb on + strand, within ECD_02428 at 2532.771 kb on - strand, within ECD_02428 at 2532.860 kb on - strand, within ECD_02428 at 2532.860 kb on - strand, within ECD_02428 at 2532.860 kb on - strand, within ECD_02428 at 2532.930 kb on + strand, within ECD_02428 at 2533.196 kb on - strand, within ECD_02428 at 2533.196 kb on - strand, within ECD_02428 at 2533.343 kb on - strand, within ECD_02428 at 2533.373 kb on + strand, within ECD_02428 at 2533.374 kb on - strand, within ECD_02428
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 2,530,265 - -1.1 2,530,265 - -0.5 2,530,297 + ECD_02426 0.12 +0.3 2,530,298 - ECD_02426 0.12 -0.3 2,530,465 - ECD_02426 0.32 +0.3 2,530,628 + ECD_02426 0.51 +0.9 2,530,628 + ECD_02426 0.51 +0.3 2,530,629 - ECD_02426 0.51 +0.5 2,530,715 + ECD_02426 0.61 -0.3 2,530,715 + ECD_02426 0.61 -0.2 2,530,751 - ECD_02426 0.65 -0.3 2,530,751 - ECD_02426 0.65 +0.7 2,530,793 + ECD_02426 0.70 -0.5 2,530,794 - ECD_02426 0.70 +1.6 2,530,943 + ECD_02426 0.87 +0.3 2,531,025 + +0.2 2,531,048 - -0.1 2,531,101 - -0.3 2,531,167 + +0.9 2,531,218 + -1.6 2,531,218 + -1.9 2,531,218 + -1.2 2,531,218 + +1.0 2,531,218 + +0.7 2,531,235 + -0.3 2,531,248 + -0.3 2,531,356 + -0.2 2,531,375 - ECD_02427 0.11 +0.3 2,531,390 - ECD_02427 0.12 -0.4 2,531,610 - ECD_02427 0.29 +0.3 2,531,625 + ECD_02427 0.30 -1.0 2,531,626 - ECD_02427 0.30 -2.8 2,531,626 - ECD_02427 0.30 -0.2 2,531,702 + ECD_02427 0.36 -1.6 2,531,711 + ECD_02427 0.37 -0.0 2,532,015 + ECD_02427 0.60 -0.7 2,532,029 + ECD_02427 0.62 +0.3 2,532,029 + ECD_02427 0.62 -1.4 2,532,030 - ECD_02427 0.62 -1.9 2,532,030 - ECD_02427 0.62 -0.2 2,532,030 - ECD_02427 0.62 +0.8 2,532,030 - ECD_02427 0.62 -0.2 2,532,085 + ECD_02427 0.66 +0.3 2,532,114 - ECD_02427 0.68 -0.8 2,532,283 + ECD_02427 0.81 -1.1 2,532,352 + ECD_02427 0.87 -2.8 2,532,353 - ECD_02427 0.87 +0.2 2,532,353 - ECD_02427 0.87 +0.3 2,532,416 + -0.9 2,532,416 + -1.0 2,532,418 + +1.1 2,532,419 - -1.6 2,532,597 + -0.2 2,532,709 + ECD_02428 0.17 +1.7 2,532,709 + ECD_02428 0.17 -1.9 2,532,771 - ECD_02428 0.23 -0.7 2,532,860 - ECD_02428 0.31 -0.3 2,532,860 - ECD_02428 0.31 -0.9 2,532,860 - ECD_02428 0.31 +0.6 2,532,930 + ECD_02428 0.37 +0.3 2,533,196 - ECD_02428 0.60 -0.2 2,533,196 - ECD_02428 0.60 -1.6 2,533,343 - ECD_02428 0.73 +1.3 2,533,373 + ECD_02428 0.76 +0.8 2,533,374 - ECD_02428 0.76 -0.2
Or see this region's nucleotide sequence