Strain Fitness in Escherichia coli BL21 around ECD_02373

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02371 and ECD_02372 overlap by 1 nucleotidesECD_02372 and ECD_02373 are separated by 252 nucleotidesECD_02373 and ECD_02374 overlap by 1 nucleotides ECD_02371: ECD_02371 - transcriptional repressor, regulatory protein accessory to GcvA, at 2,464,395 to 2,464,967 _02371 ECD_02372: ECD_02372 - peroxiredoxin; thiol peroxidase, thioredoxin-dependent, at 2,464,967 to 2,465,437 _02372 ECD_02373: ECD_02373 - hydrogenase 4, 4Fe-4S subunit, at 2,465,690 to 2,466,307 _02373 ECD_02374: ECD_02374 - hydrogenase 4, membrane subunit, at 2,466,307 to 2,468,325 _02374 Position (kb) 2465 2466 2467Strain fitness (log2 ratio) -2 -1 0 1at 2464.717 kb on + strand, within ECD_02371at 2464.717 kb on + strand, within ECD_02371at 2464.754 kb on + strand, within ECD_02371at 2464.754 kb on + strand, within ECD_02371at 2464.755 kb on - strand, within ECD_02371at 2464.866 kb on - strand, within ECD_02371at 2464.888 kb on + strand, within ECD_02371at 2464.888 kb on + strand, within ECD_02371at 2464.889 kb on - strand, within ECD_02371at 2464.893 kb on - strand, within ECD_02371at 2464.893 kb on - strand, within ECD_02371at 2464.916 kb on + strandat 2464.961 kb on + strandat 2464.962 kb on - strandat 2464.962 kb on - strandat 2464.965 kb on + strandat 2465.439 kb on + strandat 2465.440 kb on - strandat 2465.480 kb on + strandat 2465.481 kb on - strandat 2465.481 kb on - strandat 2465.481 kb on - strandat 2465.725 kb on + strandat 2465.734 kb on + strandat 2465.734 kb on + strandat 2465.734 kb on + strandat 2465.734 kb on + strandat 2465.735 kb on - strandat 2465.735 kb on - strandat 2465.735 kb on - strandat 2465.735 kb on - strandat 2465.738 kb on - strandat 2465.767 kb on + strand, within ECD_02373at 2465.768 kb on - strand, within ECD_02373at 2466.358 kb on - strandat 2466.400 kb on - strandat 2466.400 kb on - strandat 2466.468 kb on - strandat 2466.468 kb on - strandat 2466.610 kb on + strand, within ECD_02374at 2467.052 kb on + strand, within ECD_02374at 2467.053 kb on - strand, within ECD_02374at 2467.064 kb on + strand, within ECD_02374at 2467.068 kb on + strand, within ECD_02374at 2467.181 kb on + strand, within ECD_02374at 2467.181 kb on + strand, within ECD_02374at 2467.181 kb on + strand, within ECD_02374at 2467.181 kb on + strand, within ECD_02374at 2467.181 kb on + strand, within ECD_02374at 2467.181 kb on + strand, within ECD_02374at 2467.182 kb on - strand, within ECD_02374at 2467.182 kb on - strand, within ECD_02374

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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2,464,717 + ECD_02371 0.56 +0.2
2,464,717 + ECD_02371 0.56 +0.1
2,464,754 + ECD_02371 0.63 -1.1
2,464,754 + ECD_02371 0.63 +0.4
2,464,755 - ECD_02371 0.63 -1.7
2,464,866 - ECD_02371 0.82 +1.1
2,464,888 + ECD_02371 0.86 -1.6
2,464,888 + ECD_02371 0.86 -0.4
2,464,889 - ECD_02371 0.86 -1.1
2,464,893 - ECD_02371 0.87 -0.1
2,464,893 - ECD_02371 0.87 -0.8
2,464,916 + +1.6
2,464,961 + -0.2
2,464,962 - +0.8
2,464,962 - -0.3
2,464,965 + -1.1
2,465,439 + -0.2
2,465,440 - +0.1
2,465,480 + -0.7
2,465,481 - -0.1
2,465,481 - -0.3
2,465,481 - -0.1
2,465,725 + -0.9
2,465,734 + -1.4
2,465,734 + +1.3
2,465,734 + +1.4
2,465,734 + +0.3
2,465,735 - +0.4
2,465,735 - -1.1
2,465,735 - -0.4
2,465,735 - +0.6
2,465,738 - +0.8
2,465,767 + ECD_02373 0.12 -1.4
2,465,768 - ECD_02373 0.13 -0.4
2,466,358 - +1.1
2,466,400 - -2.2
2,466,400 - -0.8
2,466,468 - -1.4
2,466,468 - -0.2
2,466,610 + ECD_02374 0.15 -1.1
2,467,052 + ECD_02374 0.37 +0.6
2,467,053 - ECD_02374 0.37 -2.3
2,467,064 + ECD_02374 0.37 -2.3
2,467,068 + ECD_02374 0.38 -0.5
2,467,181 + ECD_02374 0.43 +0.8
2,467,181 + ECD_02374 0.43 -0.4
2,467,181 + ECD_02374 0.43 -0.5
2,467,181 + ECD_02374 0.43 -1.1
2,467,181 + ECD_02374 0.43 +1.2
2,467,181 + ECD_02374 0.43 -0.7
2,467,182 - ECD_02374 0.43 -0.4
2,467,182 - ECD_02374 0.43 +0.1

Or see this region's nucleotide sequence