Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02323 and ECD_02324 overlap by 1 nucleotides ECD_02324 and ECD_02325 overlap by 1 nucleotides ECD_02325 and ECD_02326 are separated by 303 nucleotides
ECD_02323: ECD_02323 - sulfate/thiosulfate ABC transporter permease, at 2,413,207 to 2,414,082
_02323
ECD_02324: ECD_02324 - sulfate/thiosulfate ABC transporter permease, at 2,414,082 to 2,414,915
_02324
ECD_02325: ECD_02325 - thiosulfate-binding protein, at 2,414,915 to 2,415,931
_02325
ECD_02326: ECD_02326 - furfural resistance protein, putative short-chain oxidoreductase, at 2,416,235 to 2,417,026
_02326
Position (kb)
2414
2415
2416 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2413.965 kb on - strand, within ECD_02323 at 2414.092 kb on - strand at 2414.092 kb on - strand at 2414.127 kb on - strand at 2414.265 kb on - strand, within ECD_02324 at 2414.419 kb on - strand, within ECD_02324 at 2414.777 kb on - strand, within ECD_02324 at 2414.877 kb on - strand at 2414.946 kb on - strand at 2414.946 kb on - strand at 2415.081 kb on + strand, within ECD_02325 at 2415.097 kb on + strand, within ECD_02325 at 2415.098 kb on - strand, within ECD_02325 at 2415.250 kb on - strand, within ECD_02325 at 2415.250 kb on - strand, within ECD_02325 at 2415.382 kb on + strand, within ECD_02325 at 2415.451 kb on + strand, within ECD_02325 at 2415.451 kb on + strand, within ECD_02325 at 2415.452 kb on - strand, within ECD_02325 at 2415.452 kb on - strand, within ECD_02325 at 2415.452 kb on - strand, within ECD_02325 at 2415.452 kb on - strand, within ECD_02325 at 2415.454 kb on - strand, within ECD_02325 at 2415.590 kb on - strand, within ECD_02325 at 2415.590 kb on - strand, within ECD_02325 at 2415.654 kb on - strand, within ECD_02325 at 2415.671 kb on - strand, within ECD_02325 at 2415.671 kb on - strand, within ECD_02325 at 2415.671 kb on - strand, within ECD_02325 at 2415.672 kb on + strand, within ECD_02325 at 2415.672 kb on + strand, within ECD_02325 at 2415.673 kb on - strand, within ECD_02325 at 2415.834 kb on + strand at 2415.834 kb on + strand at 2415.864 kb on - strand at 2415.973 kb on + strand at 2416.120 kb on + strand at 2416.121 kb on - strand at 2416.121 kb on - strand at 2416.123 kb on + strand at 2416.123 kb on + strand at 2416.124 kb on - strand at 2416.124 kb on - strand at 2416.124 kb on - strand at 2416.184 kb on + strand at 2416.510 kb on - strand, within ECD_02326 at 2416.510 kb on - strand, within ECD_02326 at 2416.510 kb on - strand, within ECD_02326 at 2416.510 kb on - strand, within ECD_02326 at 2416.557 kb on - strand, within ECD_02326 at 2416.684 kb on + strand, within ECD_02326 at 2416.685 kb on - strand, within ECD_02326 at 2416.685 kb on - strand, within ECD_02326 at 2416.688 kb on - strand, within ECD_02326 at 2416.727 kb on - strand, within ECD_02326 at 2416.893 kb on - strand, within ECD_02326 at 2416.916 kb on - strand, within ECD_02326 at 2416.928 kb on + strand, within ECD_02326 at 2416.929 kb on - strand, within ECD_02326
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 2,413,965 - ECD_02323 0.87 -0.7 2,414,092 - -0.7 2,414,092 - +0.0 2,414,127 - -0.1 2,414,265 - ECD_02324 0.22 +0.3 2,414,419 - ECD_02324 0.40 -0.6 2,414,777 - ECD_02324 0.83 +1.6 2,414,877 - -0.6 2,414,946 - -2.3 2,414,946 - +0.8 2,415,081 + ECD_02325 0.16 +1.0 2,415,097 + ECD_02325 0.18 +1.3 2,415,098 - ECD_02325 0.18 -0.8 2,415,250 - ECD_02325 0.33 +2.1 2,415,250 - ECD_02325 0.33 -0.7 2,415,382 + ECD_02325 0.46 +0.2 2,415,451 + ECD_02325 0.53 +0.7 2,415,451 + ECD_02325 0.53 -0.7 2,415,452 - ECD_02325 0.53 +0.5 2,415,452 - ECD_02325 0.53 -0.2 2,415,452 - ECD_02325 0.53 +0.5 2,415,452 - ECD_02325 0.53 -0.8 2,415,454 - ECD_02325 0.53 +0.4 2,415,590 - ECD_02325 0.66 -2.9 2,415,590 - ECD_02325 0.66 -0.4 2,415,654 - ECD_02325 0.73 -0.4 2,415,671 - ECD_02325 0.74 +1.0 2,415,671 - ECD_02325 0.74 +0.5 2,415,671 - ECD_02325 0.74 +0.6 2,415,672 + ECD_02325 0.74 -0.1 2,415,672 + ECD_02325 0.74 -2.0 2,415,673 - ECD_02325 0.75 +0.9 2,415,834 + -1.7 2,415,834 + -0.7 2,415,864 - +1.3 2,415,973 + -0.6 2,416,120 + +0.4 2,416,121 - +0.9 2,416,121 - +0.2 2,416,123 + -0.3 2,416,123 + -1.8 2,416,124 - +1.5 2,416,124 - -1.4 2,416,124 - -0.9 2,416,184 + +0.5 2,416,510 - ECD_02326 0.35 -0.3 2,416,510 - ECD_02326 0.35 +0.8 2,416,510 - ECD_02326 0.35 -0.0 2,416,510 - ECD_02326 0.35 +0.6 2,416,557 - ECD_02326 0.41 -2.3 2,416,684 + ECD_02326 0.57 +0.2 2,416,685 - ECD_02326 0.57 -0.4 2,416,685 - ECD_02326 0.57 +0.8 2,416,688 - ECD_02326 0.57 -0.4 2,416,727 - ECD_02326 0.62 +1.0 2,416,893 - ECD_02326 0.83 -0.5 2,416,916 - ECD_02326 0.86 -0.3 2,416,928 + ECD_02326 0.88 -0.9 2,416,929 - ECD_02326 0.88 -0.4
Or see this region's nucleotide sequence