Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02312 and ECD_02313 are separated by 229 nucleotides ECD_02313 and ECD_02314 are separated by 184 nucleotides
ECD_02312: ECD_02312 - FtsZ stabilizer, at 2,402,634 to 2,403,620
_02312
ECD_02313: ECD_02313 - sulfate transporter, sulfite inhibited, at 2,403,850 to 2,404,611
_02313
ECD_02314: ECD_02314 - cysteine synthase A, O-acetylserine sulfhydrolase A subunit, at 2,404,796 to 2,405,767
_02314
Position (kb)
2403
2404
2405 Strain fitness (log2 ratio)
-2
-1
0
1 at 2403.666 kb on - strand at 2403.733 kb on - strand at 2403.892 kb on + strand at 2404.055 kb on + strand, within ECD_02313 at 2404.055 kb on + strand, within ECD_02313 at 2404.055 kb on + strand, within ECD_02313 at 2404.118 kb on - strand, within ECD_02313 at 2404.137 kb on + strand, within ECD_02313 at 2404.166 kb on + strand, within ECD_02313 at 2404.304 kb on + strand, within ECD_02313 at 2404.304 kb on + strand, within ECD_02313 at 2404.371 kb on + strand, within ECD_02313 at 2404.396 kb on + strand, within ECD_02313 at 2404.405 kb on + strand, within ECD_02313 at 2404.476 kb on + strand, within ECD_02313 at 2404.525 kb on - strand, within ECD_02313 at 2404.537 kb on - strand at 2404.709 kb on + strand at 2404.710 kb on - strand at 2404.710 kb on - strand at 2404.710 kb on - strand at 2404.710 kb on - strand at 2404.710 kb on - strand at 2404.718 kb on + strand at 2404.719 kb on - strand at 2404.719 kb on - strand at 2404.726 kb on + strand at 2404.778 kb on + strand at 2404.784 kb on + strand at 2404.801 kb on + strand at 2405.030 kb on + strand, within ECD_02314 at 2405.030 kb on + strand, within ECD_02314 at 2405.031 kb on - strand, within ECD_02314 at 2405.034 kb on + strand, within ECD_02314 at 2405.034 kb on + strand, within ECD_02314 at 2405.034 kb on + strand, within ECD_02314 at 2405.086 kb on + strand, within ECD_02314 at 2405.087 kb on - strand, within ECD_02314 at 2405.389 kb on + strand, within ECD_02314 at 2405.389 kb on + strand, within ECD_02314 at 2405.389 kb on + strand, within ECD_02314 at 2405.391 kb on + strand, within ECD_02314 at 2405.391 kb on + strand, within ECD_02314 at 2405.455 kb on + strand, within ECD_02314 at 2405.596 kb on + strand, within ECD_02314 at 2405.608 kb on + strand, within ECD_02314 at 2405.609 kb on - strand, within ECD_02314
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 2,403,666 - -0.4 2,403,733 - -0.7 2,403,892 + -1.1 2,404,055 + ECD_02313 0.27 -0.2 2,404,055 + ECD_02313 0.27 -1.3 2,404,055 + ECD_02313 0.27 -1.7 2,404,118 - ECD_02313 0.35 -1.2 2,404,137 + ECD_02313 0.38 +0.0 2,404,166 + ECD_02313 0.41 -1.3 2,404,304 + ECD_02313 0.60 -0.1 2,404,304 + ECD_02313 0.60 -1.7 2,404,371 + ECD_02313 0.68 -1.3 2,404,396 + ECD_02313 0.72 +0.3 2,404,405 + ECD_02313 0.73 -0.3 2,404,476 + ECD_02313 0.82 -1.4 2,404,525 - ECD_02313 0.89 -1.2 2,404,537 - -1.2 2,404,709 + -0.0 2,404,710 - +0.5 2,404,710 - -1.1 2,404,710 - -1.0 2,404,710 - +0.1 2,404,710 - -1.7 2,404,718 + -0.8 2,404,719 - -0.6 2,404,719 - -1.3 2,404,726 + +0.4 2,404,778 + -0.2 2,404,784 + -0.9 2,404,801 + -0.1 2,405,030 + ECD_02314 0.24 +0.1 2,405,030 + ECD_02314 0.24 +0.6 2,405,031 - ECD_02314 0.24 -1.3 2,405,034 + ECD_02314 0.24 +0.3 2,405,034 + ECD_02314 0.24 +1.3 2,405,034 + ECD_02314 0.24 -2.3 2,405,086 + ECD_02314 0.30 -1.8 2,405,087 - ECD_02314 0.30 +0.1 2,405,389 + ECD_02314 0.61 +0.5 2,405,389 + ECD_02314 0.61 +0.7 2,405,389 + ECD_02314 0.61 -1.7 2,405,391 + ECD_02314 0.61 -1.1 2,405,391 + ECD_02314 0.61 -0.3 2,405,455 + ECD_02314 0.68 +0.4 2,405,596 + ECD_02314 0.82 -0.7 2,405,608 + ECD_02314 0.84 +1.0 2,405,609 - ECD_02314 0.84 +0.5
Or see this region's nucleotide sequence