Strain Fitness in Escherichia coli BL21 around ECD_02313

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02312 and ECD_02313 are separated by 229 nucleotidesECD_02313 and ECD_02314 are separated by 184 nucleotides ECD_02312: ECD_02312 - FtsZ stabilizer, at 2,402,634 to 2,403,620 _02312 ECD_02313: ECD_02313 - sulfate transporter, sulfite inhibited, at 2,403,850 to 2,404,611 _02313 ECD_02314: ECD_02314 - cysteine synthase A, O-acetylserine sulfhydrolase A subunit, at 2,404,796 to 2,405,767 _02314 Position (kb) 2403 2404 2405Strain fitness (log2 ratio) -2 -1 0 1at 2403.666 kb on - strandat 2403.733 kb on - strandat 2403.892 kb on + strandat 2404.055 kb on + strand, within ECD_02313at 2404.055 kb on + strand, within ECD_02313at 2404.055 kb on + strand, within ECD_02313at 2404.118 kb on - strand, within ECD_02313at 2404.137 kb on + strand, within ECD_02313at 2404.166 kb on + strand, within ECD_02313at 2404.304 kb on + strand, within ECD_02313at 2404.304 kb on + strand, within ECD_02313at 2404.371 kb on + strand, within ECD_02313at 2404.396 kb on + strand, within ECD_02313at 2404.405 kb on + strand, within ECD_02313at 2404.476 kb on + strand, within ECD_02313at 2404.525 kb on - strand, within ECD_02313at 2404.537 kb on - strandat 2404.709 kb on + strandat 2404.710 kb on - strandat 2404.710 kb on - strandat 2404.710 kb on - strandat 2404.710 kb on - strandat 2404.710 kb on - strandat 2404.718 kb on + strandat 2404.719 kb on - strandat 2404.719 kb on - strandat 2404.726 kb on + strandat 2404.778 kb on + strandat 2404.784 kb on + strandat 2404.801 kb on + strandat 2405.030 kb on + strand, within ECD_02314at 2405.030 kb on + strand, within ECD_02314at 2405.031 kb on - strand, within ECD_02314at 2405.034 kb on + strand, within ECD_02314at 2405.034 kb on + strand, within ECD_02314at 2405.034 kb on + strand, within ECD_02314at 2405.086 kb on + strand, within ECD_02314at 2405.087 kb on - strand, within ECD_02314at 2405.389 kb on + strand, within ECD_02314at 2405.389 kb on + strand, within ECD_02314at 2405.389 kb on + strand, within ECD_02314at 2405.391 kb on + strand, within ECD_02314at 2405.391 kb on + strand, within ECD_02314at 2405.455 kb on + strand, within ECD_02314at 2405.596 kb on + strand, within ECD_02314at 2405.608 kb on + strand, within ECD_02314at 2405.609 kb on - strand, within ECD_02314

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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2,403,666 - -0.4
2,403,733 - -0.7
2,403,892 + -1.1
2,404,055 + ECD_02313 0.27 -0.2
2,404,055 + ECD_02313 0.27 -1.3
2,404,055 + ECD_02313 0.27 -1.7
2,404,118 - ECD_02313 0.35 -1.2
2,404,137 + ECD_02313 0.38 +0.0
2,404,166 + ECD_02313 0.41 -1.3
2,404,304 + ECD_02313 0.60 -0.1
2,404,304 + ECD_02313 0.60 -1.7
2,404,371 + ECD_02313 0.68 -1.3
2,404,396 + ECD_02313 0.72 +0.3
2,404,405 + ECD_02313 0.73 -0.3
2,404,476 + ECD_02313 0.82 -1.4
2,404,525 - ECD_02313 0.89 -1.2
2,404,537 - -1.2
2,404,709 + -0.0
2,404,710 - +0.5
2,404,710 - -1.1
2,404,710 - -1.0
2,404,710 - +0.1
2,404,710 - -1.7
2,404,718 + -0.8
2,404,719 - -0.6
2,404,719 - -1.3
2,404,726 + +0.4
2,404,778 + -0.2
2,404,784 + -0.9
2,404,801 + -0.1
2,405,030 + ECD_02314 0.24 +0.1
2,405,030 + ECD_02314 0.24 +0.6
2,405,031 - ECD_02314 0.24 -1.3
2,405,034 + ECD_02314 0.24 +0.3
2,405,034 + ECD_02314 0.24 +1.3
2,405,034 + ECD_02314 0.24 -2.3
2,405,086 + ECD_02314 0.30 -1.8
2,405,087 - ECD_02314 0.30 +0.1
2,405,389 + ECD_02314 0.61 +0.5
2,405,389 + ECD_02314 0.61 +0.7
2,405,389 + ECD_02314 0.61 -1.7
2,405,391 + ECD_02314 0.61 -1.1
2,405,391 + ECD_02314 0.61 -0.3
2,405,455 + ECD_02314 0.68 +0.4
2,405,596 + ECD_02314 0.82 -0.7
2,405,608 + ECD_02314 0.84 +1.0
2,405,609 - ECD_02314 0.84 +0.5

Or see this region's nucleotide sequence