Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02293 and ECD_02294 are separated by 24 nucleotides ECD_02294 and ECD_02295 overlap by 1 nucleotides
ECD_02293: ECD_02293 - putative PTS enzyme: Hpr, enzyme I and IIA components, at 2,379,876 to 2,382,371
_02293
ECD_02294: ECD_02294 - aminopeptidase, at 2,382,396 to 2,383,433
_02294
ECD_02295: ECD_02295 - Xaa-Pro aminopeptidase, at 2,383,433 to 2,384,518
_02295
Position (kb)
2382
2383
2384 Strain fitness (log2 ratio)
-1
0
1 at 2381.407 kb on + strand, within ECD_02293 at 2381.557 kb on - strand, within ECD_02293 at 2381.667 kb on - strand, within ECD_02293 at 2381.684 kb on - strand, within ECD_02293 at 2381.834 kb on + strand, within ECD_02293 at 2381.835 kb on - strand, within ECD_02293 at 2381.970 kb on + strand, within ECD_02293 at 2382.020 kb on - strand, within ECD_02293 at 2382.025 kb on - strand, within ECD_02293 at 2382.045 kb on + strand, within ECD_02293 at 2382.110 kb on + strand, within ECD_02293 at 2382.127 kb on + strand at 2382.127 kb on + strand at 2382.128 kb on - strand at 2382.128 kb on - strand at 2382.128 kb on - strand at 2382.305 kb on + strand at 2382.330 kb on + strand at 2382.605 kb on + strand, within ECD_02294 at 2382.606 kb on - strand, within ECD_02294 at 2382.606 kb on - strand, within ECD_02294 at 2382.606 kb on - strand, within ECD_02294 at 2383.040 kb on - strand, within ECD_02294 at 2383.174 kb on - strand, within ECD_02294 at 2383.174 kb on - strand, within ECD_02294 at 2383.230 kb on - strand, within ECD_02294 at 2383.230 kb on - strand, within ECD_02294 at 2383.230 kb on - strand, within ECD_02294 at 2383.230 kb on - strand, within ECD_02294 at 2383.417 kb on - strand at 2383.417 kb on - strand at 2383.425 kb on + strand at 2383.655 kb on - strand, within ECD_02295 at 2383.861 kb on - strand, within ECD_02295 at 2384.071 kb on + strand, within ECD_02295 at 2384.323 kb on - strand, within ECD_02295 at 2384.353 kb on - strand, within ECD_02295 at 2384.353 kb on - strand, within ECD_02295 at 2384.353 kb on - strand, within ECD_02295
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 2,381,407 + ECD_02293 0.61 -0.4 2,381,557 - ECD_02293 0.67 +0.8 2,381,667 - ECD_02293 0.72 +0.4 2,381,684 - ECD_02293 0.72 -1.1 2,381,834 + ECD_02293 0.78 -1.6 2,381,835 - ECD_02293 0.78 -0.8 2,381,970 + ECD_02293 0.84 +0.7 2,382,020 - ECD_02293 0.86 +0.7 2,382,025 - ECD_02293 0.86 +0.6 2,382,045 + ECD_02293 0.87 +0.7 2,382,110 + ECD_02293 0.90 +0.5 2,382,127 + +1.4 2,382,127 + -0.4 2,382,128 - +0.8 2,382,128 - +0.3 2,382,128 - -0.1 2,382,305 + -0.3 2,382,330 + +0.4 2,382,605 + ECD_02294 0.20 -1.3 2,382,606 - ECD_02294 0.20 -1.2 2,382,606 - ECD_02294 0.20 +1.0 2,382,606 - ECD_02294 0.20 +0.9 2,383,040 - ECD_02294 0.62 +0.8 2,383,174 - ECD_02294 0.75 +0.1 2,383,174 - ECD_02294 0.75 -0.1 2,383,230 - ECD_02294 0.80 +0.4 2,383,230 - ECD_02294 0.80 -0.4 2,383,230 - ECD_02294 0.80 -1.2 2,383,230 - ECD_02294 0.80 -0.0 2,383,417 - +0.3 2,383,417 - +1.2 2,383,425 + +0.3 2,383,655 - ECD_02295 0.20 -0.8 2,383,861 - ECD_02295 0.39 -0.8 2,384,071 + ECD_02295 0.59 -0.6 2,384,323 - ECD_02295 0.82 -1.1 2,384,353 - ECD_02295 0.85 +1.3 2,384,353 - ECD_02295 0.85 +1.3 2,384,353 - ECD_02295 0.85 +0.7
Or see this region's nucleotide sequence