Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02275 and ECD_02276 are separated by 17 nucleotides ECD_02276 and ECD_02277 are separated by 107 nucleotides
ECD_02275: ECD_02275 - D-serine transporter, at 2,355,735 to 2,357,072
_02275
ECD_02276: ECD_02276 - D-serine dehydratase, at 2,357,090 to 2,358,418
_02276
ECD_02277: ECD_02277 - putative multidrug efflux system, at 2,358,526 to 2,360,064
_02277
Position (kb)
2357
2358
2359 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 2356.153 kb on + strand, within ECD_02275 at 2356.178 kb on + strand, within ECD_02275 at 2356.228 kb on + strand, within ECD_02275 at 2356.230 kb on + strand, within ECD_02275 at 2356.231 kb on - strand, within ECD_02275 at 2356.231 kb on - strand, within ECD_02275 at 2356.242 kb on - strand, within ECD_02275 at 2356.439 kb on - strand, within ECD_02275 at 2356.445 kb on - strand, within ECD_02275 at 2356.510 kb on - strand, within ECD_02275 at 2356.575 kb on + strand, within ECD_02275 at 2356.575 kb on + strand, within ECD_02275 at 2356.575 kb on + strand, within ECD_02275 at 2356.586 kb on + strand, within ECD_02275 at 2356.599 kb on - strand, within ECD_02275 at 2356.599 kb on - strand, within ECD_02275 at 2356.599 kb on - strand, within ECD_02275 at 2356.626 kb on - strand, within ECD_02275 at 2356.647 kb on - strand, within ECD_02275 at 2356.733 kb on + strand, within ECD_02275 at 2356.745 kb on + strand, within ECD_02275 at 2356.787 kb on + strand, within ECD_02275 at 2356.994 kb on + strand at 2356.994 kb on + strand at 2357.003 kb on + strand at 2357.004 kb on - strand at 2357.136 kb on + strand at 2357.205 kb on + strand at 2357.439 kb on + strand, within ECD_02276 at 2357.525 kb on + strand, within ECD_02276 at 2357.656 kb on + strand, within ECD_02276 at 2357.656 kb on + strand, within ECD_02276 at 2357.656 kb on + strand, within ECD_02276 at 2357.761 kb on + strand, within ECD_02276 at 2357.794 kb on + strand, within ECD_02276 at 2358.022 kb on + strand, within ECD_02276 at 2358.022 kb on + strand, within ECD_02276 at 2358.023 kb on - strand, within ECD_02276 at 2358.030 kb on + strand, within ECD_02276 at 2358.040 kb on + strand, within ECD_02276 at 2358.041 kb on - strand, within ECD_02276 at 2358.048 kb on + strand, within ECD_02276 at 2358.170 kb on + strand, within ECD_02276 at 2358.194 kb on + strand, within ECD_02276 at 2358.195 kb on - strand, within ECD_02276 at 2358.229 kb on + strand, within ECD_02276 at 2358.291 kb on + strand at 2358.291 kb on + strand at 2358.483 kb on + strand at 2358.483 kb on + strand at 2358.483 kb on + strand at 2358.508 kb on - strand at 2358.584 kb on - strand at 2358.773 kb on - strand, within ECD_02277
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 2,356,153 + ECD_02275 0.31 +0.3 2,356,178 + ECD_02275 0.33 -1.4 2,356,228 + ECD_02275 0.37 -1.3 2,356,230 + ECD_02275 0.37 +0.3 2,356,231 - ECD_02275 0.37 +1.1 2,356,231 - ECD_02275 0.37 +0.2 2,356,242 - ECD_02275 0.38 -0.0 2,356,439 - ECD_02275 0.53 +0.9 2,356,445 - ECD_02275 0.53 -2.2 2,356,510 - ECD_02275 0.58 +0.5 2,356,575 + ECD_02275 0.63 -0.2 2,356,575 + ECD_02275 0.63 +0.4 2,356,575 + ECD_02275 0.63 -0.9 2,356,586 + ECD_02275 0.64 +0.2 2,356,599 - ECD_02275 0.65 -0.5 2,356,599 - ECD_02275 0.65 -0.6 2,356,599 - ECD_02275 0.65 -1.3 2,356,626 - ECD_02275 0.67 -0.2 2,356,647 - ECD_02275 0.68 -0.4 2,356,733 + ECD_02275 0.75 +0.2 2,356,745 + ECD_02275 0.75 +0.3 2,356,787 + ECD_02275 0.79 +1.2 2,356,994 + -0.5 2,356,994 + -0.8 2,357,003 + -0.9 2,357,004 - +1.0 2,357,136 + +0.7 2,357,205 + -0.4 2,357,439 + ECD_02276 0.26 +0.5 2,357,525 + ECD_02276 0.33 -0.2 2,357,656 + ECD_02276 0.43 +0.1 2,357,656 + ECD_02276 0.43 +1.1 2,357,656 + ECD_02276 0.43 -1.7 2,357,761 + ECD_02276 0.50 -0.1 2,357,794 + ECD_02276 0.53 +0.5 2,358,022 + ECD_02276 0.70 -0.5 2,358,022 + ECD_02276 0.70 +0.9 2,358,023 - ECD_02276 0.70 -1.1 2,358,030 + ECD_02276 0.71 +1.9 2,358,040 + ECD_02276 0.71 +1.7 2,358,041 - ECD_02276 0.72 -1.2 2,358,048 + ECD_02276 0.72 +1.1 2,358,170 + ECD_02276 0.81 +2.7 2,358,194 + ECD_02276 0.83 +0.7 2,358,195 - ECD_02276 0.83 +3.6 2,358,229 + ECD_02276 0.86 +0.9 2,358,291 + +1.3 2,358,291 + +1.9 2,358,483 + -0.2 2,358,483 + +1.1 2,358,483 + +0.5 2,358,508 - +5.8 2,358,584 - -0.7 2,358,773 - ECD_02277 0.16 +0.9
Or see this region's nucleotide sequence