Strain Fitness in Escherichia coli BL21 around ECD_02060

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02058 and ECD_02059 are separated by 4 nucleotidesECD_02059 and ECD_02060 overlap by 8 nucleotidesECD_02060 and ECD_02061 are separated by 6 nucleotides ECD_02058: ECD_02058 - putative ABC transporter permease, at 2,110,608 to 2,111,339 _02058 ECD_02059: ECD_02059 - putative ABC transporter ATPase, at 2,111,344 to 2,112,270 _02059 ECD_02060: ECD_02060 - putative ABC transporter permease, at 2,112,263 to 2,113,420 _02060 ECD_02061: ECD_02061 - putative ABC transporter periplasmic binding protein, at 2,113,427 to 2,114,344 _02061 Position (kb) 2112 2113 2114Strain fitness (log2 ratio) -2 -1 0 1at 2111.514 kb on - strand, within ECD_02059at 2111.527 kb on - strand, within ECD_02059at 2111.560 kb on - strand, within ECD_02059at 2111.632 kb on + strand, within ECD_02059at 2111.654 kb on - strand, within ECD_02059at 2111.932 kb on - strand, within ECD_02059at 2112.445 kb on + strand, within ECD_02060at 2112.446 kb on - strand, within ECD_02060at 2112.488 kb on + strand, within ECD_02060at 2112.596 kb on + strand, within ECD_02060at 2112.628 kb on - strand, within ECD_02060at 2112.672 kb on - strand, within ECD_02060at 2113.173 kb on - strand, within ECD_02060at 2113.455 kb on + strandat 2113.617 kb on + strand, within ECD_02061at 2113.618 kb on - strand, within ECD_02061at 2113.964 kb on - strand, within ECD_02061at 2114.398 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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2,111,514 - ECD_02059 0.18 +0.5
2,111,527 - ECD_02059 0.20 -1.4
2,111,560 - ECD_02059 0.23 +0.8
2,111,632 + ECD_02059 0.31 -0.7
2,111,654 - ECD_02059 0.33 -0.4
2,111,932 - ECD_02059 0.63 -1.7
2,112,445 + ECD_02060 0.16 -0.1
2,112,446 - ECD_02060 0.16 -0.5
2,112,488 + ECD_02060 0.19 +0.5
2,112,596 + ECD_02060 0.29 -1.2
2,112,628 - ECD_02060 0.32 -1.7
2,112,672 - ECD_02060 0.35 -1.6
2,113,173 - ECD_02060 0.79 -1.9
2,113,455 + -1.5
2,113,617 + ECD_02061 0.21 -0.6
2,113,618 - ECD_02061 0.21 +0.5
2,113,964 - ECD_02061 0.58 -0.5
2,114,398 - +0.1

Or see this region's nucleotide sequence