Strain Fitness in Escherichia coli BL21 around ECD_02044

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02043 and ECD_02044 are separated by 131 nucleotidesECD_02044 and ECD_02045 are separated by 140 nucleotides ECD_02043: ECD_02043 - antiporter inner membrane protein, at 2,087,922 to 2,089,031 _02043 ECD_02044: ECD_02044 - methionyl-tRNA synthetase, at 2,089,163 to 2,091,196 _02044 ECD_02045: ECD_02045 - molybdate metabolism regulator, at 2,091,337 to 2,095,131 _02045 Position (kb) 2089 2090 2091 2092Strain fitness (log2 ratio) -1 0 1 2at 2088.179 kb on + strand, within ECD_02043at 2088.188 kb on + strand, within ECD_02043at 2088.188 kb on + strand, within ECD_02043at 2088.188 kb on + strand, within ECD_02043at 2088.512 kb on + strand, within ECD_02043at 2088.513 kb on - strand, within ECD_02043at 2088.524 kb on + strand, within ECD_02043at 2088.592 kb on + strand, within ECD_02043at 2088.593 kb on - strand, within ECD_02043at 2088.671 kb on + strand, within ECD_02043at 2088.723 kb on - strand, within ECD_02043at 2089.049 kb on - strandat 2089.049 kb on - strandat 2089.051 kb on - strandat 2089.054 kb on + strandat 2089.070 kb on - strandat 2089.075 kb on - strandat 2089.128 kb on + strandat 2089.128 kb on + strandat 2090.803 kb on + strand, within ECD_02044at 2090.836 kb on + strand, within ECD_02044at 2091.194 kb on + strandat 2092.166 kb on + strand, within ECD_02045

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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2,088,179 + ECD_02043 0.23 -0.3
2,088,188 + ECD_02043 0.24 +0.4
2,088,188 + ECD_02043 0.24 -0.2
2,088,188 + ECD_02043 0.24 -0.3
2,088,512 + ECD_02043 0.53 -0.4
2,088,513 - ECD_02043 0.53 -0.2
2,088,524 + ECD_02043 0.54 +0.4
2,088,592 + ECD_02043 0.60 +1.3
2,088,593 - ECD_02043 0.60 +2.1
2,088,671 + ECD_02043 0.67 +1.9
2,088,723 - ECD_02043 0.72 -0.7
2,089,049 - +0.9
2,089,049 - +0.6
2,089,051 - -1.2
2,089,054 + -1.3
2,089,070 - +0.8
2,089,075 - -0.1
2,089,128 + -0.9
2,089,128 + +2.1
2,090,803 + ECD_02044 0.81 +0.2
2,090,836 + ECD_02044 0.82 +0.7
2,091,194 + -1.4
2,092,166 + ECD_02045 0.22 +0.4

Or see this region's nucleotide sequence