Strain Fitness in Escherichia coli BL21 around ECD_01974

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01973 and ECD_01974 are separated by 100 nucleotidesECD_01974 and ECD_01975 are separated by 133 nucleotides ECD_01973: ECD_01973 - putative diguanylate cyclase, at 2,042,273 to 2,045,590 _01973 ECD_01974: ECD_01974 - 3-methyl-adenine DNA glycosylase II, at 2,045,691 to 2,046,539 _01974 ECD_01975: ECD_01975 - Hsp70 chaperone family protein, at 2,046,673 to 2,048,025 _01975 Position (kb) 2045 2046 2047Strain fitness (log2 ratio) -2 -1 0 1at 2044.761 kb on - strand, within ECD_01973at 2045.200 kb on - strand, within ECD_01973at 2045.202 kb on + strand, within ECD_01973at 2045.345 kb on + strandat 2045.368 kb on - strandat 2045.519 kb on + strandat 2045.633 kb on - strandat 2045.744 kb on - strandat 2045.958 kb on + strand, within ECD_01974at 2045.959 kb on - strand, within ECD_01974at 2046.021 kb on - strand, within ECD_01974at 2046.086 kb on - strand, within ECD_01974at 2046.116 kb on - strand, within ECD_01974at 2046.174 kb on + strand, within ECD_01974at 2046.437 kb on - strand, within ECD_01974at 2046.437 kb on - strand, within ECD_01974at 2046.536 kb on - strandat 2046.536 kb on - strandat 2046.691 kb on + strandat 2046.691 kb on + strandat 2046.823 kb on + strand, within ECD_01975at 2046.824 kb on - strand, within ECD_01975

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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2,044,761 - ECD_01973 0.75 +0.8
2,045,200 - ECD_01973 0.88 +1.5
2,045,202 + ECD_01973 0.88 +0.7
2,045,345 + +0.3
2,045,368 - +0.9
2,045,519 + -0.3
2,045,633 - -0.1
2,045,744 - -0.4
2,045,958 + ECD_01974 0.31 +0.5
2,045,959 - ECD_01974 0.32 +0.3
2,046,021 - ECD_01974 0.39 -2.6
2,046,086 - ECD_01974 0.47 -0.7
2,046,116 - ECD_01974 0.50 +0.7
2,046,174 + ECD_01974 0.57 -1.4
2,046,437 - ECD_01974 0.88 -1.8
2,046,437 - ECD_01974 0.88 -1.1
2,046,536 - +0.4
2,046,536 - -0.3
2,046,691 + +0.7
2,046,691 + -0.7
2,046,823 + ECD_01975 0.11 +1.0
2,046,824 - ECD_01975 0.11 -0.1

Or see this region's nucleotide sequence