Strain Fitness in Escherichia coli BL21 around ECD_01726

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01724 and ECD_01725 overlap by 1 nucleotidesECD_01725 and ECD_01726 are separated by 66 nucleotidesECD_01726 and ECD_01727 are separated by 8 nucleotidesECD_01727 and ECD_01728 are separated by 86 nucleotides ECD_01724: ECD_01724 - putative ABC transporter permease, at 1,781,588 to 1,783,123 _01724 ECD_01725: ECD_01725 - putative ABC transporter ATPase, at 1,783,123 to 1,783,776 _01725 ECD_01726: ECD_01726 - molybdopterin synthase sulfurtransferase, at 1,783,843 to 1,785,150 _01726 ECD_01727: ECD_01727 - CDP-alcohol phosphatidyltransferase family inner membrane protein, at 1,785,159 to 1,785,779 _01727 ECD_01728: ECD_01728 - CTP pyrophosphohydrolase; also hydrolyzes 2-hydroxy-dATP, 8-hydroxy-dGTP, 5-hydroxy-CTP, dCTP and 5-methyl-dCTP, at 1,785,866 to 1,786,273 _01728 Position (kb) 1783 1784 1785 1786Strain fitness (log2 ratio) -2 -1 0 1 2at 1782.929 kb on + strand, within ECD_01724at 1782.931 kb on + strand, within ECD_01724at 1782.931 kb on + strand, within ECD_01724at 1782.932 kb on - strand, within ECD_01724at 1783.149 kb on - strandat 1783.383 kb on - strand, within ECD_01725at 1783.722 kb on + strandat 1784.208 kb on + strand, within ECD_01726at 1784.569 kb on - strand, within ECD_01726at 1784.829 kb on + strand, within ECD_01726at 1784.829 kb on + strand, within ECD_01726at 1785.295 kb on - strand, within ECD_01727at 1785.295 kb on - strand, within ECD_01727at 1785.480 kb on - strand, within ECD_01727at 1785.795 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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1,782,929 + ECD_01724 0.87 +1.7
1,782,931 + ECD_01724 0.87 -0.6
1,782,931 + ECD_01724 0.87 +0.6
1,782,932 - ECD_01724 0.88 -0.8
1,783,149 - -1.0
1,783,383 - ECD_01725 0.40 +2.3
1,783,722 + -0.9
1,784,208 + ECD_01726 0.28 -0.1
1,784,569 - ECD_01726 0.56 -0.3
1,784,829 + ECD_01726 0.75 +0.2
1,784,829 + ECD_01726 0.75 -2.3
1,785,295 - ECD_01727 0.22 -0.0
1,785,295 - ECD_01727 0.22 -1.8
1,785,480 - ECD_01727 0.52 -0.1
1,785,795 - -0.3

Or see this region's nucleotide sequence