Strain Fitness in Escherichia coli BL21 around ECD_01713

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01712 and ECD_01713 are separated by 329 nucleotidesECD_01713 and ECD_01714 overlap by 8 nucleotides ECD_01712: ECD_01712 - periplasmic ATP-independent protein refolding chaperone, stress-induced, at 1,769,553 to 1,770,038 _01712 ECD_01713: ECD_01713 - succinylglutamate desuccinylase, at 1,770,368 to 1,771,336 _01713 ECD_01714: ECD_01714 - succinylarginine dihydrolase, at 1,771,329 to 1,772,672 _01714 Position (kb) 1770 1771 1772Strain fitness (log2 ratio) -1 0 1 2at 1770.044 kb on - strandat 1770.438 kb on + strandat 1770.761 kb on - strand, within ECD_01713at 1770.761 kb on - strand, within ECD_01713at 1771.509 kb on - strand, within ECD_01714

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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1,770,044 - +0.9
1,770,438 + +2.2
1,770,761 - ECD_01713 0.41 -0.2
1,770,761 - ECD_01713 0.41 -1.4
1,771,509 - ECD_01714 0.13 -1.3

Or see this region's nucleotide sequence