Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00768 and ECD_00769 are separated by 228 nucleotides ECD_00769 and ECD_00770 are separated by 264 nucleotides ECD_00770 and ECD_00771 are separated by 73 nucleotides
ECD_00768: ECD_00768 - putative dehydrogenase, at 820,343 to 821,428
_00768
ECD_00769: ECD_00769 - DUF1471 family putative periplasmic protein, at 821,657 to 821,917
_00769
ECD_00770: ECD_00770 - DksA-type zinc finger protein, at 822,182 to 822,448
_00770
ECD_00771: ECD_00771 - Fe(II)-dependent oxygenase superfamily protein, at 822,522 to 823,199
_00771
Position (kb) 821
822 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 820.930 kb on + strand, within ECD_00768 at 821.044 kb on + strand, within ECD_00768 at 821.150 kb on - strand, within ECD_00768 at 821.203 kb on + strand, within ECD_00768 at 821.204 kb on - strand, within ECD_00768 at 821.471 kb on + strand at 821.472 kb on - strand at 821.544 kb on + strand at 821.544 kb on + strand at 821.545 kb on - strand at 821.664 kb on + strand at 821.718 kb on + strand, within ECD_00769 at 822.468 kb on + strand at 822.469 kb on - strand at 822.469 kb on - strand at 822.469 kb on - strand at 822.475 kb on - strand at 822.486 kb on + strand at 822.486 kb on + strand at 822.564 kb on - strand at 822.618 kb on - strand, within ECD_00771 at 822.628 kb on - strand, within ECD_00771 at 822.684 kb on - strand, within ECD_00771 at 822.745 kb on + strand, within ECD_00771 at 822.746 kb on - strand, within ECD_00771 at 822.823 kb on + strand, within ECD_00771 at 822.824 kb on - strand, within ECD_00771
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 820,930 + ECD_00768 0.54 +1.1 821,044 + ECD_00768 0.65 +1.5 821,150 - ECD_00768 0.74 +0.2 821,203 + ECD_00768 0.79 -1.3 821,204 - ECD_00768 0.79 +0.0 821,471 + +0.0 821,472 - -2.2 821,544 + +0.6 821,544 + -0.3 821,545 - -0.1 821,664 + +0.5 821,718 + ECD_00769 0.23 -0.4 822,468 + -1.1 822,469 - +0.0 822,469 - -1.0 822,469 - -0.1 822,475 - -3.0 822,486 + -0.6 822,486 + -2.1 822,564 - +0.1 822,618 - ECD_00771 0.14 +0.0 822,628 - ECD_00771 0.16 -2.2 822,684 - ECD_00771 0.24 -0.6 822,745 + ECD_00771 0.33 -0.1 822,746 - ECD_00771 0.33 -1.1 822,823 + ECD_00771 0.44 -0.7 822,824 - ECD_00771 0.45 -0.9
Or see this region's nucleotide sequence