Strain Fitness in Escherichia coli BL21 around ECD_00765

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00764 and ECD_00765 are separated by 231 nucleotidesECD_00765 and ECD_00766 are separated by 119 nucleotides ECD_00764: ECD_00764 - ATP-dependent RNA helicase, at 814,864 to 816,228 _00764 ECD_00765: ECD_00765 - DUF1768 family protein, at 816,460 to 816,942 _00765 ECD_00766: ECD_00766 - ATP-dependent DNA helicase, at 817,062 to 819,212 _00766 Position (kb) 816 817Strain fitness (log2 ratio) -2 -1 0 1at 815.821 kb on + strand, within ECD_00764at 815.837 kb on + strand, within ECD_00764at 815.848 kb on + strand, within ECD_00764at 815.849 kb on - strand, within ECD_00764at 816.227 kb on - strandat 816.462 kb on - strandat 816.549 kb on - strand, within ECD_00765at 816.697 kb on - strand, within ECD_00765at 817.107 kb on - strandat 817.252 kb on - strandat 817.448 kb on + strand, within ECD_00766at 817.558 kb on - strand, within ECD_00766at 817.558 kb on - strand, within ECD_00766at 817.584 kb on - strand, within ECD_00766at 817.662 kb on + strand, within ECD_00766at 817.662 kb on + strand, within ECD_00766at 817.663 kb on - strand, within ECD_00766

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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815,821 + ECD_00764 0.70 -1.2
815,837 + ECD_00764 0.71 +0.9
815,848 + ECD_00764 0.72 +0.3
815,849 - ECD_00764 0.72 +0.2
816,227 - -0.5
816,462 - -0.4
816,549 - ECD_00765 0.18 -0.4
816,697 - ECD_00765 0.49 -1.9
817,107 - -0.5
817,252 - -0.8
817,448 + ECD_00766 0.18 +0.9
817,558 - ECD_00766 0.23 +0.4
817,558 - ECD_00766 0.23 -0.9
817,584 - ECD_00766 0.24 -0.8
817,662 + ECD_00766 0.28 -1.7
817,662 + ECD_00766 0.28 -0.9
817,663 - ECD_00766 0.28 +0.9

Or see this region's nucleotide sequence