Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00725 and ECD_10002 are separated by 386 nucleotides
ECD_00725: ECD_00725 - acyl-CoA thioesterase, lipoprotein, at 747,066 to 748,349
_00725
ECD_10002: ECD_10002 - Lactose operon repressor, at 748,736 to 749,818
_10002
Position (kb) 747
748
749 Strain fitness (log2 ratio) -2
-1
0
1
2 at 746.079 kb on - strand at 746.112 kb on + strand at 746.172 kb on - strand at 746.242 kb on + strand at 746.727 kb on - strand at 746.780 kb on + strand at 746.781 kb on - strand at 746.836 kb on - strand at 746.842 kb on + strand at 746.943 kb on + strand at 746.962 kb on - strand at 747.093 kb on - strand at 747.116 kb on - strand at 747.134 kb on - strand at 747.137 kb on + strand at 747.178 kb on - strand at 747.294 kb on - strand, within ECD_00725 at 747.416 kb on - strand, within ECD_00725 at 747.416 kb on - strand, within ECD_00725 at 747.432 kb on - strand, within ECD_00725 at 747.682 kb on - strand, within ECD_00725 at 747.682 kb on - strand, within ECD_00725 at 747.682 kb on - strand, within ECD_00725 at 747.682 kb on - strand, within ECD_00725 at 747.682 kb on - strand, within ECD_00725 at 747.682 kb on - strand, within ECD_00725 at 747.682 kb on - strand, within ECD_00725 at 747.682 kb on - strand, within ECD_00725 at 747.805 kb on + strand, within ECD_00725 at 747.806 kb on - strand, within ECD_00725 at 747.806 kb on - strand, within ECD_00725 at 747.809 kb on + strand, within ECD_00725 at 747.809 kb on + strand, within ECD_00725 at 747.810 kb on - strand, within ECD_00725 at 747.810 kb on - strand, within ECD_00725 at 747.810 kb on - strand, within ECD_00725 at 747.811 kb on + strand, within ECD_00725 at 747.834 kb on - strand, within ECD_00725 at 747.835 kb on + strand, within ECD_00725 at 747.836 kb on - strand, within ECD_00725 at 747.836 kb on - strand, within ECD_00725 at 747.938 kb on - strand, within ECD_00725 at 747.945 kb on - strand, within ECD_00725 at 747.970 kb on + strand, within ECD_00725 at 747.971 kb on - strand, within ECD_00725 at 747.971 kb on - strand, within ECD_00725 at 747.971 kb on - strand, within ECD_00725 at 747.971 kb on - strand, within ECD_00725 at 748.010 kb on - strand, within ECD_00725 at 748.035 kb on - strand, within ECD_00725 at 748.068 kb on - strand, within ECD_00725 at 748.068 kb on - strand, within ECD_00725 at 748.074 kb on + strand, within ECD_00725 at 748.178 kb on - strand, within ECD_00725 at 748.409 kb on - strand at 748.590 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 746,079 - +1.6 746,112 + -0.1 746,172 - -0.2 746,242 + -1.0 746,727 - +0.6 746,780 + +0.6 746,781 - +1.8 746,836 - +1.0 746,842 + +0.9 746,943 + +0.3 746,962 - -0.7 747,093 - -0.1 747,116 - -2.1 747,134 - -1.7 747,137 + -0.4 747,178 - -0.8 747,294 - ECD_00725 0.18 -0.4 747,416 - ECD_00725 0.27 -1.5 747,416 - ECD_00725 0.27 -1.0 747,432 - ECD_00725 0.29 -0.2 747,682 - ECD_00725 0.48 +0.9 747,682 - ECD_00725 0.48 +2.5 747,682 - ECD_00725 0.48 +1.5 747,682 - ECD_00725 0.48 +0.1 747,682 - ECD_00725 0.48 +0.7 747,682 - ECD_00725 0.48 +0.4 747,682 - ECD_00725 0.48 +2.2 747,682 - ECD_00725 0.48 +1.1 747,805 + ECD_00725 0.58 +0.0 747,806 - ECD_00725 0.58 -0.1 747,806 - ECD_00725 0.58 -0.5 747,809 + ECD_00725 0.58 +1.4 747,809 + ECD_00725 0.58 -1.5 747,810 - ECD_00725 0.58 +0.3 747,810 - ECD_00725 0.58 +0.3 747,810 - ECD_00725 0.58 -0.3 747,811 + ECD_00725 0.58 +1.1 747,834 - ECD_00725 0.60 +0.7 747,835 + ECD_00725 0.60 -0.2 747,836 - ECD_00725 0.60 +1.1 747,836 - ECD_00725 0.60 -0.7 747,938 - ECD_00725 0.68 -0.6 747,945 - ECD_00725 0.68 +1.9 747,970 + ECD_00725 0.70 +0.6 747,971 - ECD_00725 0.70 +0.2 747,971 - ECD_00725 0.70 -1.0 747,971 - ECD_00725 0.70 +0.2 747,971 - ECD_00725 0.70 +0.9 748,010 - ECD_00725 0.74 +0.4 748,035 - ECD_00725 0.75 +0.7 748,068 - ECD_00725 0.78 +0.6 748,068 - ECD_00725 0.78 -0.6 748,074 + ECD_00725 0.79 +1.0 748,178 - ECD_00725 0.87 -0.5 748,409 - +0.2 748,590 - +0.4
Or see this region's nucleotide sequence