Strain Fitness in Escherichia coli BL21 around ECD_00149

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00148 and ECD_00149 are separated by 219 nucleotidesECD_00149 and ECD_00150 are separated by 50 nucleotidesECD_00150 and ECD_00151 overlap by 1 nucleotides ECD_00148: ECD_00148 - fused glycosyl transferase and transpeptidase, at 167,582 to 170,107 _00148 ECD_00149: ECD_00149 - ferrichrome outer membrane transporter, at 170,327 to 172,570 _00149 ECD_00150: ECD_00150 - iron(3+)-hydroxamate import ABC transporter ATPase, at 172,621 to 173,418 _00150 ECD_00151: ECD_00151 - iron(3+)-hydroxamate import ABC transporter periplasmic binding protein, at 173,418 to 174,308 _00151 Position (kb) 170 171 172 173Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 169.583 kb on + strand, within ECD_00148at 169.698 kb on + strand, within ECD_00148at 169.698 kb on + strand, within ECD_00148at 169.698 kb on + strand, within ECD_00148at 169.699 kb on - strand, within ECD_00148at 169.699 kb on - strand, within ECD_00148at 169.699 kb on - strand, within ECD_00148at 169.782 kb on - strand, within ECD_00148at 169.809 kb on - strand, within ECD_00148at 169.817 kb on + strand, within ECD_00148at 169.818 kb on - strand, within ECD_00148at 169.889 kb on + strandat 170.089 kb on + strandat 170.089 kb on + strandat 170.090 kb on - strandat 170.090 kb on - strandat 170.101 kb on + strandat 170.102 kb on - strandat 170.112 kb on + strandat 170.112 kb on + strandat 170.154 kb on - strandat 170.171 kb on - strandat 170.263 kb on - strandat 170.267 kb on + strandat 170.275 kb on + strandat 170.309 kb on + strandat 170.321 kb on - strandat 170.322 kb on + strandat 170.322 kb on + strandat 170.322 kb on + strandat 170.382 kb on + strandat 170.386 kb on - strandat 170.450 kb on - strandat 170.507 kb on - strandat 170.572 kb on + strand, within ECD_00149at 170.635 kb on + strand, within ECD_00149at 170.684 kb on + strand, within ECD_00149at 170.684 kb on + strand, within ECD_00149at 170.735 kb on - strand, within ECD_00149at 170.738 kb on + strand, within ECD_00149at 170.738 kb on + strand, within ECD_00149at 170.771 kb on + strand, within ECD_00149at 170.771 kb on + strand, within ECD_00149at 170.795 kb on + strand, within ECD_00149at 170.795 kb on + strand, within ECD_00149at 170.797 kb on + strand, within ECD_00149at 170.798 kb on - strand, within ECD_00149at 170.849 kb on - strand, within ECD_00149at 170.994 kb on - strand, within ECD_00149at 171.062 kb on + strand, within ECD_00149at 171.062 kb on + strand, within ECD_00149at 171.067 kb on + strand, within ECD_00149at 171.068 kb on - strand, within ECD_00149at 171.068 kb on - strand, within ECD_00149at 171.125 kb on + strand, within ECD_00149at 171.125 kb on + strand, within ECD_00149at 171.125 kb on + strand, within ECD_00149at 171.152 kb on + strand, within ECD_00149at 171.155 kb on + strand, within ECD_00149at 171.248 kb on + strand, within ECD_00149at 171.248 kb on + strand, within ECD_00149at 171.249 kb on - strand, within ECD_00149at 171.249 kb on - strand, within ECD_00149at 171.362 kb on + strand, within ECD_00149at 171.362 kb on + strand, within ECD_00149at 171.443 kb on + strand, within ECD_00149at 171.455 kb on - strand, within ECD_00149at 171.455 kb on - strand, within ECD_00149at 171.458 kb on + strand, within ECD_00149at 171.459 kb on - strand, within ECD_00149at 171.566 kb on - strand, within ECD_00149at 171.633 kb on - strand, within ECD_00149at 171.647 kb on - strand, within ECD_00149at 171.728 kb on + strand, within ECD_00149at 171.833 kb on - strand, within ECD_00149at 171.875 kb on + strand, within ECD_00149at 171.876 kb on - strand, within ECD_00149at 171.894 kb on + strand, within ECD_00149at 171.902 kb on + strand, within ECD_00149at 171.903 kb on - strand, within ECD_00149at 171.907 kb on + strand, within ECD_00149at 171.907 kb on + strand, within ECD_00149at 171.911 kb on + strand, within ECD_00149at 171.911 kb on + strand, within ECD_00149at 171.958 kb on + strand, within ECD_00149at 171.958 kb on + strand, within ECD_00149at 172.004 kb on + strand, within ECD_00149at 172.004 kb on + strand, within ECD_00149at 172.004 kb on + strand, within ECD_00149at 172.004 kb on + strand, within ECD_00149at 172.005 kb on - strand, within ECD_00149at 172.005 kb on - strand, within ECD_00149at 172.030 kb on - strand, within ECD_00149at 172.048 kb on + strand, within ECD_00149at 172.048 kb on + strand, within ECD_00149at 172.177 kb on - strand, within ECD_00149at 172.189 kb on + strand, within ECD_00149at 172.193 kb on + strand, within ECD_00149at 172.194 kb on - strand, within ECD_00149at 172.194 kb on - strand, within ECD_00149at 172.220 kb on - strand, within ECD_00149at 172.222 kb on + strand, within ECD_00149at 172.222 kb on + strand, within ECD_00149at 172.222 kb on + strand, within ECD_00149at 172.223 kb on - strand, within ECD_00149at 172.223 kb on - strand, within ECD_00149at 172.226 kb on + strand, within ECD_00149at 172.226 kb on + strand, within ECD_00149at 172.226 kb on + strand, within ECD_00149at 172.227 kb on - strand, within ECD_00149at 172.227 kb on - strand, within ECD_00149at 172.238 kb on - strand, within ECD_00149at 172.283 kb on + strand, within ECD_00149at 172.283 kb on + strand, within ECD_00149at 172.286 kb on - strand, within ECD_00149at 172.286 kb on - strand, within ECD_00149at 172.286 kb on - strand, within ECD_00149at 172.286 kb on - strand, within ECD_00149at 172.337 kb on + strand, within ECD_00149at 172.340 kb on - strand, within ECD_00149at 172.390 kb on + strandat 172.391 kb on - strandat 172.465 kb on + strandat 172.487 kb on + strandat 172.487 kb on + strandat 172.511 kb on + strandat 172.511 kb on + strandat 172.512 kb on - strandat 172.512 kb on - strandat 172.666 kb on - strandat 172.668 kb on + strandat 172.669 kb on - strandat 172.669 kb on - strandat 172.669 kb on - strandat 172.767 kb on + strand, within ECD_00150at 173.198 kb on + strand, within ECD_00150at 173.269 kb on + strand, within ECD_00150at 173.528 kb on + strand, within ECD_00151at 173.529 kb on - strand, within ECD_00151at 173.560 kb on + strand, within ECD_00151

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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169,583 + ECD_00148 0.79 +0.1
169,698 + ECD_00148 0.84 +0.4
169,698 + ECD_00148 0.84 +0.9
169,698 + ECD_00148 0.84 -0.6
169,699 - ECD_00148 0.84 +1.4
169,699 - ECD_00148 0.84 -1.7
169,699 - ECD_00148 0.84 -1.5
169,782 - ECD_00148 0.87 -0.2
169,809 - ECD_00148 0.88 -0.3
169,817 + ECD_00148 0.88 -0.5
169,818 - ECD_00148 0.89 -0.2
169,889 + -0.2
170,089 + +0.2
170,089 + +0.9
170,090 - +0.7
170,090 - +0.0
170,101 + +1.2
170,102 - -0.1
170,112 + -0.8
170,112 + -0.2
170,154 - -0.5
170,171 - -0.9
170,263 - -0.4
170,267 + -0.1
170,275 + +0.5
170,309 + -0.3
170,321 - +1.5
170,322 + -1.2
170,322 + -0.4
170,322 + +1.2
170,382 + -0.4
170,386 - +0.2
170,450 - -0.7
170,507 - -0.2
170,572 + ECD_00149 0.11 +0.9
170,635 + ECD_00149 0.14 -1.3
170,684 + ECD_00149 0.16 -0.6
170,684 + ECD_00149 0.16 -0.8
170,735 - ECD_00149 0.18 +0.7
170,738 + ECD_00149 0.18 +1.9
170,738 + ECD_00149 0.18 -1.1
170,771 + ECD_00149 0.20 -0.2
170,771 + ECD_00149 0.20 +0.1
170,795 + ECD_00149 0.21 -0.2
170,795 + ECD_00149 0.21 +0.4
170,797 + ECD_00149 0.21 +0.2
170,798 - ECD_00149 0.21 -0.2
170,849 - ECD_00149 0.23 -1.0
170,994 - ECD_00149 0.30 -2.2
171,062 + ECD_00149 0.33 +0.3
171,062 + ECD_00149 0.33 -1.1
171,067 + ECD_00149 0.33 +0.5
171,068 - ECD_00149 0.33 -0.4
171,068 - ECD_00149 0.33 -0.8
171,125 + ECD_00149 0.36 +0.2
171,125 + ECD_00149 0.36 -0.9
171,125 + ECD_00149 0.36 -1.4
171,152 + ECD_00149 0.37 +0.0
171,155 + ECD_00149 0.37 +1.1
171,248 + ECD_00149 0.41 -1.0
171,248 + ECD_00149 0.41 -0.6
171,249 - ECD_00149 0.41 +0.6
171,249 - ECD_00149 0.41 -1.3
171,362 + ECD_00149 0.46 -0.6
171,362 + ECD_00149 0.46 +0.4
171,443 + ECD_00149 0.50 +0.1
171,455 - ECD_00149 0.50 -1.9
171,455 - ECD_00149 0.50 +0.2
171,458 + ECD_00149 0.50 +0.1
171,459 - ECD_00149 0.50 +0.0
171,566 - ECD_00149 0.55 +0.0
171,633 - ECD_00149 0.58 -2.5
171,647 - ECD_00149 0.59 -0.6
171,728 + ECD_00149 0.62 +1.5
171,833 - ECD_00149 0.67 -1.3
171,875 + ECD_00149 0.69 +0.9
171,876 - ECD_00149 0.69 +0.9
171,894 + ECD_00149 0.70 -1.9
171,902 + ECD_00149 0.70 -0.6
171,903 - ECD_00149 0.70 +1.1
171,907 + ECD_00149 0.70 +0.3
171,907 + ECD_00149 0.70 -0.5
171,911 + ECD_00149 0.71 -0.3
171,911 + ECD_00149 0.71 +0.5
171,958 + ECD_00149 0.73 +0.5
171,958 + ECD_00149 0.73 -0.0
172,004 + ECD_00149 0.75 -0.1
172,004 + ECD_00149 0.75 +1.4
172,004 + ECD_00149 0.75 +0.1
172,004 + ECD_00149 0.75 -1.0
172,005 - ECD_00149 0.75 +0.4
172,005 - ECD_00149 0.75 +0.2
172,030 - ECD_00149 0.76 -1.6
172,048 + ECD_00149 0.77 -1.4
172,048 + ECD_00149 0.77 +0.9
172,177 - ECD_00149 0.82 +1.2
172,189 + ECD_00149 0.83 -1.0
172,193 + ECD_00149 0.83 -1.0
172,194 - ECD_00149 0.83 -3.2
172,194 - ECD_00149 0.83 +2.1
172,220 - ECD_00149 0.84 +0.0
172,222 + ECD_00149 0.84 -2.0
172,222 + ECD_00149 0.84 -0.2
172,222 + ECD_00149 0.84 -0.1
172,223 - ECD_00149 0.84 -2.8
172,223 - ECD_00149 0.84 -2.1
172,226 + ECD_00149 0.85 -0.4
172,226 + ECD_00149 0.85 -0.1
172,226 + ECD_00149 0.85 -0.7
172,227 - ECD_00149 0.85 +0.1
172,227 - ECD_00149 0.85 -0.6
172,238 - ECD_00149 0.85 -1.0
172,283 + ECD_00149 0.87 -1.1
172,283 + ECD_00149 0.87 -1.7
172,286 - ECD_00149 0.87 -0.8
172,286 - ECD_00149 0.87 +0.7
172,286 - ECD_00149 0.87 -0.3
172,286 - ECD_00149 0.87 -0.5
172,337 + ECD_00149 0.90 -0.9
172,340 - ECD_00149 0.90 -0.6
172,390 + +0.5
172,391 - +0.4
172,465 + -0.1
172,487 + -0.6
172,487 + -0.6
172,511 + -0.0
172,511 + -0.5
172,512 - -1.2
172,512 - +1.2
172,666 - -1.9
172,668 + -0.7
172,669 - +0.3
172,669 - -1.8
172,669 - -0.8
172,767 + ECD_00150 0.18 -0.0
173,198 + ECD_00150 0.72 -2.0
173,269 + ECD_00150 0.81 -1.0
173,528 + ECD_00151 0.12 -0.1
173,529 - ECD_00151 0.12 +0.7
173,560 + ECD_00151 0.16 -0.5

Or see this region's nucleotide sequence