Strain Fitness in Escherichia coli BL21 around ECD_03701

Experiment: Bas30

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03700 and ECD_03701 are separated by 118 nucleotidesECD_03701 and ECD_03702 are separated by 63 nucleotidesECD_03702 and ECD_03703 are separated by 61 nucleotides ECD_03700: ECD_03700 - outer membrane phospholipase A, at 3,897,737 to 3,898,606 _03700 ECD_03701: ECD_03701 - ATP-dependent DNA helicase, at 3,898,725 to 3,900,560 _03701 ECD_03702: ECD_03702 - threonine efflux pump, at 3,900,624 to 3,901,244 _03702 ECD_03703: ECD_03703 - homoserine, homoserine lactone and S-methyl-methionine efflux pump, at 3,901,306 to 3,901,926 _03703 Position (kb) 3898 3899 3900 3901Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3897.772 kb on + strandat 3897.773 kb on - strandat 3897.773 kb on - strandat 3897.789 kb on + strandat 3897.789 kb on + strandat 3897.789 kb on + strandat 3897.790 kb on - strandat 3897.790 kb on - strandat 3897.790 kb on - strandat 3897.791 kb on + strandat 3897.791 kb on + strandat 3897.791 kb on + strandat 3897.791 kb on + strandat 3897.791 kb on + strandat 3897.791 kb on + strandat 3897.791 kb on + strandat 3897.792 kb on - strandat 3897.792 kb on - strandat 3897.792 kb on - strandat 3897.847 kb on + strand, within ECD_03700at 3897.848 kb on - strand, within ECD_03700at 3897.848 kb on - strand, within ECD_03700at 3897.859 kb on + strand, within ECD_03700at 3897.859 kb on + strand, within ECD_03700at 3897.860 kb on - strand, within ECD_03700at 3897.860 kb on - strand, within ECD_03700at 3897.894 kb on - strand, within ECD_03700at 3897.899 kb on + strand, within ECD_03700at 3897.899 kb on + strand, within ECD_03700at 3897.911 kb on + strand, within ECD_03700at 3897.911 kb on + strand, within ECD_03700at 3897.911 kb on + strand, within ECD_03700at 3897.911 kb on + strand, within ECD_03700at 3897.911 kb on + strand, within ECD_03700at 3897.912 kb on - strand, within ECD_03700at 3897.912 kb on - strand, within ECD_03700at 3897.912 kb on - strand, within ECD_03700at 3897.920 kb on + strand, within ECD_03700at 3897.921 kb on - strand, within ECD_03700at 3897.921 kb on - strand, within ECD_03700at 3897.921 kb on - strand, within ECD_03700at 3897.921 kb on - strand, within ECD_03700at 3897.921 kb on - strand, within ECD_03700at 3897.921 kb on - strand, within ECD_03700at 3898.042 kb on - strand, within ECD_03700at 3898.072 kb on + strand, within ECD_03700at 3898.099 kb on + strand, within ECD_03700at 3898.100 kb on - strand, within ECD_03700at 3898.102 kb on + strand, within ECD_03700at 3898.102 kb on + strand, within ECD_03700at 3898.136 kb on + strand, within ECD_03700at 3898.136 kb on + strand, within ECD_03700at 3898.137 kb on - strand, within ECD_03700at 3898.172 kb on + strand, within ECD_03700at 3898.271 kb on + strand, within ECD_03700at 3898.272 kb on - strand, within ECD_03700at 3898.272 kb on - strand, within ECD_03700at 3898.325 kb on + strand, within ECD_03700at 3898.326 kb on - strand, within ECD_03700at 3898.326 kb on - strand, within ECD_03700at 3898.326 kb on - strand, within ECD_03700at 3898.326 kb on - strand, within ECD_03700at 3898.326 kb on - strand, within ECD_03700at 3898.326 kb on - strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.368 kb on - strand, within ECD_03700at 3898.368 kb on - strand, within ECD_03700at 3898.368 kb on - strand, within ECD_03700at 3898.368 kb on - strand, within ECD_03700at 3898.368 kb on - strand, within ECD_03700at 3898.376 kb on + strand, within ECD_03700at 3898.377 kb on - strand, within ECD_03700at 3898.398 kb on - strand, within ECD_03700at 3898.437 kb on - strand, within ECD_03700at 3898.471 kb on - strand, within ECD_03700at 3898.476 kb on + strand, within ECD_03700at 3898.476 kb on + strand, within ECD_03700at 3898.476 kb on + strand, within ECD_03700at 3898.476 kb on + strand, within ECD_03700at 3898.476 kb on + strand, within ECD_03700at 3898.477 kb on - strand, within ECD_03700at 3898.477 kb on - strand, within ECD_03700at 3898.477 kb on - strand, within ECD_03700at 3898.508 kb on + strand, within ECD_03700at 3898.509 kb on - strand, within ECD_03700at 3898.510 kb on + strand, within ECD_03700at 3898.550 kb on + strandat 3898.550 kb on + strandat 3898.552 kb on + strandat 3898.552 kb on + strandat 3898.553 kb on - strandat 3898.553 kb on - strandat 3898.553 kb on - strandat 3898.585 kb on + strandat 3898.586 kb on - strandat 3898.586 kb on - strandat 3898.586 kb on - strandat 3898.586 kb on - strandat 3898.586 kb on - strandat 3898.586 kb on - strandat 3898.586 kb on - strandat 3898.695 kb on + strandat 3899.051 kb on + strand, within ECD_03701at 3899.088 kb on + strand, within ECD_03701at 3899.089 kb on - strand, within ECD_03701at 3899.089 kb on - strand, within ECD_03701at 3899.089 kb on - strand, within ECD_03701at 3899.117 kb on + strand, within ECD_03701at 3899.180 kb on + strand, within ECD_03701at 3899.180 kb on + strand, within ECD_03701at 3899.180 kb on + strand, within ECD_03701at 3899.180 kb on + strand, within ECD_03701at 3899.181 kb on - strand, within ECD_03701at 3899.181 kb on - strand, within ECD_03701at 3899.181 kb on - strand, within ECD_03701at 3899.181 kb on - strand, within ECD_03701at 3899.373 kb on + strand, within ECD_03701at 3899.374 kb on - strand, within ECD_03701at 3899.439 kb on - strand, within ECD_03701at 3899.451 kb on - strand, within ECD_03701at 3899.451 kb on - strand, within ECD_03701at 3899.451 kb on - strand, within ECD_03701at 3899.451 kb on - strand, within ECD_03701at 3899.451 kb on - strand, within ECD_03701at 3899.454 kb on + strand, within ECD_03701at 3899.476 kb on + strand, within ECD_03701at 3899.526 kb on + strand, within ECD_03701at 3899.546 kb on + strand, within ECD_03701at 3899.546 kb on + strand, within ECD_03701at 3899.689 kb on - strand, within ECD_03701at 3899.748 kb on + strand, within ECD_03701at 3899.828 kb on + strand, within ECD_03701at 3899.892 kb on + strand, within ECD_03701at 3899.933 kb on + strand, within ECD_03701at 3899.934 kb on - strand, within ECD_03701at 3899.959 kb on - strand, within ECD_03701at 3900.030 kb on + strand, within ECD_03701at 3900.031 kb on - strand, within ECD_03701at 3900.031 kb on - strand, within ECD_03701at 3900.031 kb on - strand, within ECD_03701at 3900.056 kb on + strand, within ECD_03701at 3900.079 kb on - strand, within ECD_03701at 3900.103 kb on - strand, within ECD_03701at 3900.105 kb on - strand, within ECD_03701at 3900.185 kb on + strand, within ECD_03701at 3900.186 kb on - strand, within ECD_03701at 3900.205 kb on + strand, within ECD_03701at 3900.321 kb on + strand, within ECD_03701at 3900.321 kb on + strand, within ECD_03701at 3900.321 kb on + strand, within ECD_03701at 3900.321 kb on + strand, within ECD_03701at 3900.321 kb on + strand, within ECD_03701at 3900.321 kb on + strand, within ECD_03701at 3900.321 kb on + strand, within ECD_03701at 3900.322 kb on - strand, within ECD_03701at 3900.322 kb on - strand, within ECD_03701at 3900.322 kb on - strand, within ECD_03701at 3900.322 kb on - strand, within ECD_03701at 3900.322 kb on - strand, within ECD_03701at 3900.322 kb on - strand, within ECD_03701at 3900.322 kb on - strand, within ECD_03701at 3900.393 kb on + strandat 3900.394 kb on - strandat 3900.400 kb on + strandat 3900.405 kb on - strandat 3900.515 kb on + strandat 3900.558 kb on + strandat 3900.571 kb on - strandat 3900.624 kb on - strandat 3900.624 kb on - strandat 3900.659 kb on + strandat 3900.659 kb on + strandat 3900.659 kb on + strandat 3900.659 kb on + strandat 3900.660 kb on - strandat 3900.660 kb on - strandat 3900.716 kb on + strand, within ECD_03702at 3900.717 kb on - strand, within ECD_03702at 3900.803 kb on - strand, within ECD_03702at 3900.846 kb on - strand, within ECD_03702at 3900.864 kb on + strand, within ECD_03702at 3900.864 kb on + strand, within ECD_03702at 3900.865 kb on - strand, within ECD_03702at 3900.865 kb on - strand, within ECD_03702at 3900.919 kb on + strand, within ECD_03702at 3900.919 kb on + strand, within ECD_03702at 3900.919 kb on + strand, within ECD_03702at 3900.920 kb on - strand, within ECD_03702at 3900.920 kb on - strand, within ECD_03702at 3900.979 kb on + strand, within ECD_03702at 3900.979 kb on + strand, within ECD_03702at 3900.980 kb on - strand, within ECD_03702at 3901.010 kb on + strand, within ECD_03702at 3901.011 kb on - strand, within ECD_03702at 3901.011 kb on - strand, within ECD_03702at 3901.027 kb on + strand, within ECD_03702at 3901.091 kb on + strand, within ECD_03702at 3901.091 kb on + strand, within ECD_03702at 3901.092 kb on - strand, within ECD_03702at 3901.347 kb on + strandat 3901.398 kb on + strand, within ECD_03703at 3901.399 kb on - strand, within ECD_03703at 3901.434 kb on - strand, within ECD_03703at 3901.449 kb on + strand, within ECD_03703at 3901.450 kb on - strand, within ECD_03703at 3901.464 kb on + strand, within ECD_03703at 3901.464 kb on + strand, within ECD_03703at 3901.486 kb on - strand, within ECD_03703at 3901.487 kb on + strand, within ECD_03703at 3901.487 kb on + strand, within ECD_03703at 3901.488 kb on - strand, within ECD_03703at 3901.488 kb on - strand, within ECD_03703at 3901.488 kb on - strand, within ECD_03703at 3901.488 kb on - strand, within ECD_03703at 3901.488 kb on - strand, within ECD_03703at 3901.551 kb on + strand, within ECD_03703at 3901.552 kb on - strand, within ECD_03703at 3901.552 kb on - strand, within ECD_03703

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas30
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3,897,772 + -0.7
3,897,773 - +0.8
3,897,773 - -0.5
3,897,789 + -0.4
3,897,789 + -0.5
3,897,789 + +0.6
3,897,790 - +0.2
3,897,790 - -0.0
3,897,790 - -0.1
3,897,791 + +0.5
3,897,791 + +0.1
3,897,791 + +0.9
3,897,791 + -0.2
3,897,791 + +0.1
3,897,791 + -0.4
3,897,791 + +1.1
3,897,792 - +0.1
3,897,792 - -0.3
3,897,792 - -0.1
3,897,847 + ECD_03700 0.13 -1.4
3,897,848 - ECD_03700 0.13 -0.5
3,897,848 - ECD_03700 0.13 -1.0
3,897,859 + ECD_03700 0.14 -0.6
3,897,859 + ECD_03700 0.14 -2.7
3,897,860 - ECD_03700 0.14 -0.4
3,897,860 - ECD_03700 0.14 +0.4
3,897,894 - ECD_03700 0.18 +0.2
3,897,899 + ECD_03700 0.19 -0.7
3,897,899 + ECD_03700 0.19 -0.6
3,897,911 + ECD_03700 0.20 +0.3
3,897,911 + ECD_03700 0.20 +1.3
3,897,911 + ECD_03700 0.20 +1.5
3,897,911 + ECD_03700 0.20 +0.3
3,897,911 + ECD_03700 0.20 +0.1
3,897,912 - ECD_03700 0.20 -0.2
3,897,912 - ECD_03700 0.20 +0.9
3,897,912 - ECD_03700 0.20 -0.9
3,897,920 + ECD_03700 0.21 +0.2
3,897,921 - ECD_03700 0.21 +0.1
3,897,921 - ECD_03700 0.21 +0.3
3,897,921 - ECD_03700 0.21 -0.4
3,897,921 - ECD_03700 0.21 -0.2
3,897,921 - ECD_03700 0.21 +0.1
3,897,921 - ECD_03700 0.21 -0.4
3,898,042 - ECD_03700 0.35 +0.7
3,898,072 + ECD_03700 0.39 -0.6
3,898,099 + ECD_03700 0.42 +0.5
3,898,100 - ECD_03700 0.42 +0.4
3,898,102 + ECD_03700 0.42 +0.3
3,898,102 + ECD_03700 0.42 +0.1
3,898,136 + ECD_03700 0.46 +0.3
3,898,136 + ECD_03700 0.46 +0.8
3,898,137 - ECD_03700 0.46 +0.6
3,898,172 + ECD_03700 0.50 +0.2
3,898,271 + ECD_03700 0.61 +0.5
3,898,272 - ECD_03700 0.61 +0.6
3,898,272 - ECD_03700 0.61 -0.5
3,898,325 + ECD_03700 0.68 +0.6
3,898,326 - ECD_03700 0.68 -1.1
3,898,326 - ECD_03700 0.68 -3.3
3,898,326 - ECD_03700 0.68 -1.1
3,898,326 - ECD_03700 0.68 +0.0
3,898,326 - ECD_03700 0.68 +0.2
3,898,326 - ECD_03700 0.68 -0.3
3,898,367 + ECD_03700 0.72 -0.3
3,898,367 + ECD_03700 0.72 -0.4
3,898,367 + ECD_03700 0.72 -0.1
3,898,367 + ECD_03700 0.72 +0.9
3,898,367 + ECD_03700 0.72 -0.0
3,898,367 + ECD_03700 0.72 -0.2
3,898,367 + ECD_03700 0.72 +0.4
3,898,368 - ECD_03700 0.73 +0.2
3,898,368 - ECD_03700 0.73 -0.4
3,898,368 - ECD_03700 0.73 -0.1
3,898,368 - ECD_03700 0.73 -0.2
3,898,368 - ECD_03700 0.73 +0.5
3,898,376 + ECD_03700 0.73 -0.0
3,898,377 - ECD_03700 0.74 -0.2
3,898,398 - ECD_03700 0.76 -0.2
3,898,437 - ECD_03700 0.80 +0.3
3,898,471 - ECD_03700 0.84 -1.3
3,898,476 + ECD_03700 0.85 +1.2
3,898,476 + ECD_03700 0.85 -0.3
3,898,476 + ECD_03700 0.85 +0.6
3,898,476 + ECD_03700 0.85 -0.4
3,898,476 + ECD_03700 0.85 +0.4
3,898,477 - ECD_03700 0.85 +0.3
3,898,477 - ECD_03700 0.85 -2.0
3,898,477 - ECD_03700 0.85 -1.4
3,898,508 + ECD_03700 0.89 +0.6
3,898,509 - ECD_03700 0.89 -0.1
3,898,510 + ECD_03700 0.89 +0.4
3,898,550 + -0.7
3,898,550 + +0.9
3,898,552 + +0.8
3,898,552 + -0.3
3,898,553 - +0.1
3,898,553 - +0.6
3,898,553 - +0.1
3,898,585 + +0.2
3,898,586 - +1.1
3,898,586 - -0.8
3,898,586 - -0.7
3,898,586 - +0.1
3,898,586 - +0.7
3,898,586 - +0.2
3,898,586 - -0.6
3,898,695 + -0.3
3,899,051 + ECD_03701 0.18 +0.2
3,899,088 + ECD_03701 0.20 -0.7
3,899,089 - ECD_03701 0.20 -0.7
3,899,089 - ECD_03701 0.20 -1.0
3,899,089 - ECD_03701 0.20 -0.2
3,899,117 + ECD_03701 0.21 -0.5
3,899,180 + ECD_03701 0.25 -0.5
3,899,180 + ECD_03701 0.25 +0.4
3,899,180 + ECD_03701 0.25 -0.4
3,899,180 + ECD_03701 0.25 -0.6
3,899,181 - ECD_03701 0.25 -0.6
3,899,181 - ECD_03701 0.25 -0.4
3,899,181 - ECD_03701 0.25 -0.8
3,899,181 - ECD_03701 0.25 -0.4
3,899,373 + ECD_03701 0.35 -0.6
3,899,374 - ECD_03701 0.35 -0.1
3,899,439 - ECD_03701 0.39 -0.2
3,899,451 - ECD_03701 0.40 -1.9
3,899,451 - ECD_03701 0.40 +0.0
3,899,451 - ECD_03701 0.40 +0.1
3,899,451 - ECD_03701 0.40 -1.1
3,899,451 - ECD_03701 0.40 -0.3
3,899,454 + ECD_03701 0.40 -0.8
3,899,476 + ECD_03701 0.41 -0.4
3,899,526 + ECD_03701 0.44 -0.2
3,899,546 + ECD_03701 0.45 +0.3
3,899,546 + ECD_03701 0.45 -0.7
3,899,689 - ECD_03701 0.53 +1.1
3,899,748 + ECD_03701 0.56 +0.6
3,899,828 + ECD_03701 0.60 -1.7
3,899,892 + ECD_03701 0.64 -0.0
3,899,933 + ECD_03701 0.66 +0.5
3,899,934 - ECD_03701 0.66 -1.6
3,899,959 - ECD_03701 0.67 +0.0
3,900,030 + ECD_03701 0.71 -1.0
3,900,031 - ECD_03701 0.71 -0.3
3,900,031 - ECD_03701 0.71 -0.1
3,900,031 - ECD_03701 0.71 -0.2
3,900,056 + ECD_03701 0.72 -0.2
3,900,079 - ECD_03701 0.74 -1.0
3,900,103 - ECD_03701 0.75 -0.8
3,900,105 - ECD_03701 0.75 +1.4
3,900,185 + ECD_03701 0.80 +0.2
3,900,186 - ECD_03701 0.80 +0.3
3,900,205 + ECD_03701 0.81 -0.3
3,900,321 + ECD_03701 0.87 -0.1
3,900,321 + ECD_03701 0.87 +0.1
3,900,321 + ECD_03701 0.87 -0.5
3,900,321 + ECD_03701 0.87 +1.6
3,900,321 + ECD_03701 0.87 +1.9
3,900,321 + ECD_03701 0.87 -0.1
3,900,321 + ECD_03701 0.87 -0.6
3,900,322 - ECD_03701 0.87 +0.0
3,900,322 - ECD_03701 0.87 +0.2
3,900,322 - ECD_03701 0.87 -0.3
3,900,322 - ECD_03701 0.87 +0.4
3,900,322 - ECD_03701 0.87 +0.2
3,900,322 - ECD_03701 0.87 +0.1
3,900,322 - ECD_03701 0.87 +0.7
3,900,393 + -0.3
3,900,394 - +0.0
3,900,400 + -0.7
3,900,405 - +0.2
3,900,515 + -0.1
3,900,558 + +0.8
3,900,571 - +0.4
3,900,624 - -0.1
3,900,624 - +0.9
3,900,659 + +0.0
3,900,659 + -0.1
3,900,659 + +0.4
3,900,659 + +0.1
3,900,660 - +0.1
3,900,660 - -0.6
3,900,716 + ECD_03702 0.15 +0.5
3,900,717 - ECD_03702 0.15 -0.5
3,900,803 - ECD_03702 0.29 +0.1
3,900,846 - ECD_03702 0.36 -1.1
3,900,864 + ECD_03702 0.39 +1.0
3,900,864 + ECD_03702 0.39 +0.1
3,900,865 - ECD_03702 0.39 -0.0
3,900,865 - ECD_03702 0.39 +0.0
3,900,919 + ECD_03702 0.48 -0.1
3,900,919 + ECD_03702 0.48 -0.4
3,900,919 + ECD_03702 0.48 -0.8
3,900,920 - ECD_03702 0.48 +0.4
3,900,920 - ECD_03702 0.48 +0.4
3,900,979 + ECD_03702 0.57 +0.0
3,900,979 + ECD_03702 0.57 +0.4
3,900,980 - ECD_03702 0.57 -0.2
3,901,010 + ECD_03702 0.62 -1.5
3,901,011 - ECD_03702 0.62 +0.0
3,901,011 - ECD_03702 0.62 -0.6
3,901,027 + ECD_03702 0.65 +0.6
3,901,091 + ECD_03702 0.75 -1.0
3,901,091 + ECD_03702 0.75 +0.4
3,901,092 - ECD_03702 0.75 -0.4
3,901,347 + -0.8
3,901,398 + ECD_03703 0.15 +0.1
3,901,399 - ECD_03703 0.15 -0.1
3,901,434 - ECD_03703 0.21 +0.5
3,901,449 + ECD_03703 0.23 +0.2
3,901,450 - ECD_03703 0.23 -0.1
3,901,464 + ECD_03703 0.25 +2.8
3,901,464 + ECD_03703 0.25 -0.2
3,901,486 - ECD_03703 0.29 -0.5
3,901,487 + ECD_03703 0.29 +0.0
3,901,487 + ECD_03703 0.29 -0.4
3,901,488 - ECD_03703 0.29 -1.1
3,901,488 - ECD_03703 0.29 -0.3
3,901,488 - ECD_03703 0.29 +0.4
3,901,488 - ECD_03703 0.29 -0.3
3,901,488 - ECD_03703 0.29 -0.1
3,901,551 + ECD_03703 0.39 -0.5
3,901,552 - ECD_03703 0.40 +0.0
3,901,552 - ECD_03703 0.40 -0.3

Or see this region's nucleotide sequence