Experiment: Bas30
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02740 and ECD_02741 are separated by 25 nucleotides ECD_02741 and ECD_02742 are separated by 167 nucleotides ECD_02742 and ECD_02743 are separated by 299 nucleotides
ECD_02740: ECD_02740 - proline aminopeptidase P II, at 2,884,373 to 2,885,698
_02740
ECD_02741: ECD_02741 - UPF0149 family protein, at 2,885,724 to 2,886,302
_02741
ECD_02742: ECD_02742 - FtsZ stabilizer, at 2,886,470 to 2,886,799
_02742
ECD_02743: ECD_02743 - 5-formyltetrahydrofolate cyclo-ligase family protein, at 2,887,099 to 2,887,647
_02743
Position (kb)
2886
2887 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2885.699 kb on - strand at 2885.730 kb on + strand at 2885.730 kb on + strand at 2885.731 kb on - strand at 2885.731 kb on - strand at 2885.731 kb on - strand at 2885.731 kb on - strand at 2885.746 kb on - strand at 2885.774 kb on + strand at 2885.775 kb on - strand at 2885.813 kb on - strand, within ECD_02741 at 2885.813 kb on - strand, within ECD_02741 at 2885.870 kb on - strand, within ECD_02741 at 2885.889 kb on - strand, within ECD_02741 at 2885.904 kb on - strand, within ECD_02741 at 2886.038 kb on - strand, within ECD_02741 at 2886.038 kb on - strand, within ECD_02741 at 2886.038 kb on - strand, within ECD_02741 at 2886.156 kb on + strand, within ECD_02741 at 2886.156 kb on + strand, within ECD_02741 at 2886.157 kb on - strand, within ECD_02741 at 2886.192 kb on + strand, within ECD_02741 at 2886.193 kb on - strand, within ECD_02741 at 2886.193 kb on - strand, within ECD_02741 at 2886.193 kb on - strand, within ECD_02741 at 2886.193 kb on - strand, within ECD_02741 at 2886.193 kb on - strand, within ECD_02741 at 2886.193 kb on - strand, within ECD_02741 at 2886.193 kb on - strand, within ECD_02741 at 2886.193 kb on - strand, within ECD_02741 at 2886.193 kb on - strand, within ECD_02741 at 2886.194 kb on - strand, within ECD_02741 at 2886.208 kb on - strand, within ECD_02741 at 2886.208 kb on - strand, within ECD_02741 at 2886.208 kb on - strand, within ECD_02741 at 2886.275 kb on - strand at 2886.295 kb on - strand at 2886.295 kb on - strand at 2886.295 kb on - strand at 2886.296 kb on + strand at 2886.297 kb on - strand at 2886.297 kb on - strand at 2886.297 kb on - strand at 2886.297 kb on - strand at 2886.297 kb on - strand at 2886.297 kb on - strand at 2886.297 kb on - strand at 2886.302 kb on + strand at 2886.302 kb on + strand at 2886.302 kb on + strand at 2886.302 kb on + strand at 2886.302 kb on + strand at 2886.302 kb on + strand at 2886.302 kb on + strand at 2886.303 kb on - strand at 2886.303 kb on - strand at 2886.303 kb on - strand at 2886.303 kb on - strand at 2886.303 kb on - strand at 2886.303 kb on - strand at 2886.303 kb on - strand at 2886.329 kb on - strand at 2886.329 kb on - strand at 2886.329 kb on - strand at 2886.329 kb on - strand at 2886.329 kb on - strand at 2886.337 kb on + strand at 2886.338 kb on - strand at 2886.338 kb on - strand at 2886.338 kb on - strand at 2886.342 kb on + strand at 2886.399 kb on + strand at 2886.399 kb on + strand at 2886.399 kb on + strand at 2886.399 kb on + strand at 2886.399 kb on + strand at 2886.399 kb on + strand at 2886.399 kb on + strand at 2886.399 kb on + strand at 2886.400 kb on - strand at 2886.604 kb on + strand, within ECD_02742 at 2886.604 kb on + strand, within ECD_02742 at 2886.616 kb on + strand, within ECD_02742 at 2886.656 kb on + strand, within ECD_02742 at 2886.657 kb on - strand, within ECD_02742 at 2886.738 kb on + strand, within ECD_02742 at 2886.738 kb on + strand, within ECD_02742 at 2886.738 kb on + strand, within ECD_02742 at 2886.738 kb on + strand, within ECD_02742 at 2886.738 kb on + strand, within ECD_02742 at 2886.738 kb on + strand, within ECD_02742 at 2886.738 kb on + strand, within ECD_02742 at 2886.750 kb on + strand, within ECD_02742 at 2886.750 kb on + strand, within ECD_02742 at 2886.781 kb on + strand at 2886.812 kb on + strand at 2886.820 kb on + strand at 2886.820 kb on + strand at 2886.820 kb on + strand at 2886.820 kb on + strand at 2886.820 kb on + strand at 2886.820 kb on + strand at 2886.891 kb on + strand at 2887.030 kb on + strand at 2887.030 kb on + strand at 2887.030 kb on + strand at 2887.030 kb on + strand at 2887.055 kb on + strand at 2887.256 kb on + strand, within ECD_02743 at 2887.256 kb on + strand, within ECD_02743 at 2887.256 kb on + strand, within ECD_02743 at 2887.256 kb on + strand, within ECD_02743 at 2887.286 kb on + strand, within ECD_02743 at 2887.288 kb on + strand, within ECD_02743 at 2887.288 kb on + strand, within ECD_02743 at 2887.465 kb on + strand, within ECD_02743 at 2887.498 kb on + strand, within ECD_02743 at 2887.511 kb on + strand, within ECD_02743 at 2887.529 kb on - strand, within ECD_02743 at 2887.620 kb on + strand at 2887.696 kb on + strand at 2887.696 kb on + strand at 2887.697 kb on - strand at 2887.708 kb on + strand at 2887.749 kb on + strand at 2887.749 kb on + strand at 2887.752 kb on + strand at 2887.753 kb on - strand at 2887.753 kb on - strand at 2887.753 kb on - strand at 2887.766 kb on + strand at 2887.772 kb on + strand at 2887.772 kb on + strand at 2887.772 kb on + strand at 2887.772 kb on + strand at 2887.772 kb on + strand at 2887.778 kb on + strand at 2887.778 kb on + strand at 2887.778 kb on + strand at 2887.778 kb on + strand at 2887.778 kb on + strand at 2887.779 kb on - strand at 2887.779 kb on - strand at 2887.787 kb on + strand at 2887.787 kb on + strand at 2887.787 kb on + strand at 2887.787 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas30 remove 2,885,699 - -0.1 2,885,730 + -0.0 2,885,730 + -1.1 2,885,731 - -0.5 2,885,731 - -0.5 2,885,731 - -0.2 2,885,731 - +1.8 2,885,746 - +0.8 2,885,774 + -0.1 2,885,775 - -1.0 2,885,813 - ECD_02741 0.15 -0.1 2,885,813 - ECD_02741 0.15 -0.1 2,885,870 - ECD_02741 0.25 -0.4 2,885,889 - ECD_02741 0.28 +0.4 2,885,904 - ECD_02741 0.31 +0.1 2,886,038 - ECD_02741 0.54 +0.4 2,886,038 - ECD_02741 0.54 -0.0 2,886,038 - ECD_02741 0.54 -0.1 2,886,156 + ECD_02741 0.75 +0.3 2,886,156 + ECD_02741 0.75 -0.1 2,886,157 - ECD_02741 0.75 +0.5 2,886,192 + ECD_02741 0.81 +0.2 2,886,193 - ECD_02741 0.81 +0.5 2,886,193 - ECD_02741 0.81 +2.1 2,886,193 - ECD_02741 0.81 +0.8 2,886,193 - ECD_02741 0.81 +0.3 2,886,193 - ECD_02741 0.81 -0.2 2,886,193 - ECD_02741 0.81 -0.8 2,886,193 - ECD_02741 0.81 +0.5 2,886,193 - ECD_02741 0.81 -0.7 2,886,193 - ECD_02741 0.81 +0.8 2,886,194 - ECD_02741 0.81 -1.6 2,886,208 - ECD_02741 0.84 +1.0 2,886,208 - ECD_02741 0.84 +0.1 2,886,208 - ECD_02741 0.84 -0.4 2,886,275 - -0.5 2,886,295 - +1.2 2,886,295 - -0.0 2,886,295 - +0.1 2,886,296 + -0.2 2,886,297 - -0.5 2,886,297 - +0.3 2,886,297 - -1.1 2,886,297 - +0.0 2,886,297 - -0.3 2,886,297 - -0.0 2,886,297 - +0.6 2,886,302 + +0.6 2,886,302 + -1.5 2,886,302 + -1.1 2,886,302 + +0.2 2,886,302 + +0.6 2,886,302 + -0.7 2,886,302 + -0.3 2,886,303 - +0.1 2,886,303 - -0.9 2,886,303 - -0.3 2,886,303 - +0.3 2,886,303 - +0.4 2,886,303 - -0.5 2,886,303 - -1.6 2,886,329 - +0.6 2,886,329 - +0.8 2,886,329 - +0.1 2,886,329 - -0.1 2,886,329 - -0.8 2,886,337 + -0.3 2,886,338 - -0.6 2,886,338 - -1.1 2,886,338 - -0.4 2,886,342 + -1.5 2,886,399 + -0.1 2,886,399 + -0.1 2,886,399 + +0.9 2,886,399 + -1.5 2,886,399 + -0.3 2,886,399 + +1.5 2,886,399 + +0.5 2,886,399 + +0.2 2,886,400 - -2.4 2,886,604 + ECD_02742 0.41 -0.5 2,886,604 + ECD_02742 0.41 -0.6 2,886,616 + ECD_02742 0.44 -0.8 2,886,656 + ECD_02742 0.56 -1.7 2,886,657 - ECD_02742 0.57 +0.5 2,886,738 + ECD_02742 0.81 -1.0 2,886,738 + ECD_02742 0.81 +0.6 2,886,738 + ECD_02742 0.81 -1.7 2,886,738 + ECD_02742 0.81 -0.3 2,886,738 + ECD_02742 0.81 -0.9 2,886,738 + ECD_02742 0.81 -1.0 2,886,738 + ECD_02742 0.81 -1.0 2,886,750 + ECD_02742 0.85 -0.5 2,886,750 + ECD_02742 0.85 -0.1 2,886,781 + +0.5 2,886,812 + +1.0 2,886,820 + +1.0 2,886,820 + +0.1 2,886,820 + -0.6 2,886,820 + -0.4 2,886,820 + -0.5 2,886,820 + +0.1 2,886,891 + -0.1 2,887,030 + -0.3 2,887,030 + -2.0 2,887,030 + +0.4 2,887,030 + +0.6 2,887,055 + +1.0 2,887,256 + ECD_02743 0.29 -0.5 2,887,256 + ECD_02743 0.29 +0.0 2,887,256 + ECD_02743 0.29 -1.2 2,887,256 + ECD_02743 0.29 -0.3 2,887,286 + ECD_02743 0.34 -0.2 2,887,288 + ECD_02743 0.34 +0.6 2,887,288 + ECD_02743 0.34 -1.4 2,887,465 + ECD_02743 0.67 -0.1 2,887,498 + ECD_02743 0.73 +0.2 2,887,511 + ECD_02743 0.75 -0.3 2,887,529 - ECD_02743 0.78 +1.2 2,887,620 + +0.5 2,887,696 + +0.2 2,887,696 + -0.3 2,887,697 - -0.5 2,887,708 + -0.1 2,887,749 + +0.0 2,887,749 + -0.8 2,887,752 + -0.2 2,887,753 - +0.6 2,887,753 - +0.8 2,887,753 - -0.1 2,887,766 + +0.5 2,887,772 + -0.1 2,887,772 + +0.5 2,887,772 + +0.1 2,887,772 + -0.0 2,887,772 + -0.2 2,887,778 + -0.3 2,887,778 + +0.1 2,887,778 + +0.3 2,887,778 + -0.2 2,887,778 + -1.2 2,887,779 - -0.7 2,887,779 - -2.7 2,887,787 + +0.9 2,887,787 + -0.0 2,887,787 + -2.1 2,887,787 + -0.3
Or see this region's nucleotide sequence