Experiment: Bas30
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00797 and ECD_00798 are separated by 17 nucleotides ECD_00798 and ECD_00799 are separated by 2 nucleotides
ECD_00797: ECD_00797 - glutathione ABC transporter periplasmic binding protein, at 853,330 to 854,868
_00797
ECD_00798: ECD_00798 - glutathione ABC transporter permease, at 854,886 to 855,806
_00798
ECD_00799: ECD_00799 - glutathione ABC transporter permease, at 855,809 to 856,720
_00799
Position (kb) 854
855
856 Strain fitness (log2 ratio) -2
-1
0
1 at 853.982 kb on + strand, within ECD_00797 at 854.127 kb on + strand, within ECD_00797 at 854.127 kb on + strand, within ECD_00797 at 854.139 kb on + strand, within ECD_00797 at 854.139 kb on + strand, within ECD_00797 at 854.140 kb on - strand, within ECD_00797 at 854.140 kb on - strand, within ECD_00797 at 854.145 kb on + strand, within ECD_00797 at 854.259 kb on + strand, within ECD_00797 at 854.314 kb on + strand, within ECD_00797 at 854.394 kb on + strand, within ECD_00797 at 854.394 kb on + strand, within ECD_00797 at 854.511 kb on + strand, within ECD_00797 at 854.653 kb on - strand, within ECD_00797 at 854.719 kb on + strand at 854.719 kb on + strand at 854.719 kb on + strand at 854.721 kb on + strand at 854.866 kb on + strand at 854.891 kb on + strand at 854.936 kb on + strand at 854.936 kb on + strand at 855.028 kb on + strand, within ECD_00798 at 855.028 kb on + strand, within ECD_00798 at 855.088 kb on - strand, within ECD_00798 at 855.089 kb on + strand, within ECD_00798 at 855.090 kb on - strand, within ECD_00798 at 855.090 kb on - strand, within ECD_00798 at 855.201 kb on - strand, within ECD_00798 at 855.495 kb on + strand, within ECD_00798 at 855.496 kb on - strand, within ECD_00798 at 855.561 kb on - strand, within ECD_00798 at 855.746 kb on + strand at 855.876 kb on + strand at 855.877 kb on - strand at 856.510 kb on + strand, within ECD_00799
Per-strain Table
Position Strand Gene LocusTag Fraction Bas30 remove 853,982 + ECD_00797 0.42 -2.3 854,127 + ECD_00797 0.52 -1.5 854,127 + ECD_00797 0.52 +1.5 854,139 + ECD_00797 0.53 -0.2 854,139 + ECD_00797 0.53 +0.6 854,140 - ECD_00797 0.53 +0.5 854,140 - ECD_00797 0.53 -0.4 854,145 + ECD_00797 0.53 -0.5 854,259 + ECD_00797 0.60 +0.7 854,314 + ECD_00797 0.64 -0.8 854,394 + ECD_00797 0.69 +0.9 854,394 + ECD_00797 0.69 +0.2 854,511 + ECD_00797 0.77 +0.0 854,653 - ECD_00797 0.86 +1.6 854,719 + +0.2 854,719 + +0.3 854,719 + -0.0 854,721 + -0.4 854,866 + -1.9 854,891 + -0.4 854,936 + +0.8 854,936 + +0.5 855,028 + ECD_00798 0.15 -0.1 855,028 + ECD_00798 0.15 -0.3 855,088 - ECD_00798 0.22 -0.3 855,089 + ECD_00798 0.22 -0.2 855,090 - ECD_00798 0.22 -0.1 855,090 - ECD_00798 0.22 -1.4 855,201 - ECD_00798 0.34 -0.9 855,495 + ECD_00798 0.66 +0.2 855,496 - ECD_00798 0.66 -0.6 855,561 - ECD_00798 0.73 -1.0 855,746 + +0.2 855,876 + -0.3 855,877 - -0.7 856,510 + ECD_00799 0.77 +1.0
Or see this region's nucleotide sequence