Experiment: Bas50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04034 and ECD_04035 overlap by 29 nucleotides ECD_04035 and ECD_04036 are separated by 18 nucleotides ECD_04036 and ECD_04037 are separated by 9 nucleotides
ECD_04034: ECD_04034 - bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase, at 4,300,586 to 4,302,133
_04034
ECD_04035: ECD_04035 - tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; ADP binding protein, at 4,302,105 to 4,302,566
_04035
ECD_04036: ECD_04036 - N-acetylmuramoyl-l-alanine amidase II, at 4,302,585 to 4,303,922
_04036
ECD_04037: ECD_04037 - methyl-directed mismatch repair protein, at 4,303,932 to 4,305,779
_04037
Position (kb)
4302
4303
4304 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4301.733 kb on + strand, within ECD_04034 at 4301.734 kb on - strand, within ECD_04034 at 4301.734 kb on - strand, within ECD_04034 at 4301.769 kb on + strand, within ECD_04034 at 4301.769 kb on + strand, within ECD_04034 at 4301.770 kb on - strand, within ECD_04034 at 4301.770 kb on - strand, within ECD_04034 at 4301.790 kb on + strand, within ECD_04034 at 4301.790 kb on + strand, within ECD_04034 at 4301.791 kb on - strand, within ECD_04034 at 4301.860 kb on - strand, within ECD_04034 at 4301.866 kb on + strand, within ECD_04034 at 4301.926 kb on + strand, within ECD_04034 at 4301.926 kb on + strand, within ECD_04034 at 4302.009 kb on + strand at 4302.066 kb on + strand at 4302.589 kb on + strand at 4302.589 kb on + strand at 4302.589 kb on + strand at 4302.590 kb on - strand at 4302.590 kb on - strand at 4302.591 kb on + strand at 4302.591 kb on + strand at 4302.592 kb on - strand at 4302.666 kb on - strand at 4302.872 kb on - strand, within ECD_04036 at 4302.939 kb on + strand, within ECD_04036 at 4302.939 kb on + strand, within ECD_04036 at 4302.939 kb on + strand, within ECD_04036 at 4302.939 kb on + strand, within ECD_04036 at 4302.940 kb on - strand, within ECD_04036 at 4302.940 kb on - strand, within ECD_04036 at 4303.080 kb on - strand, within ECD_04036 at 4303.106 kb on + strand, within ECD_04036 at 4303.107 kb on - strand, within ECD_04036 at 4303.107 kb on - strand, within ECD_04036 at 4303.110 kb on - strand, within ECD_04036 at 4303.110 kb on - strand, within ECD_04036 at 4303.154 kb on + strand, within ECD_04036 at 4303.160 kb on + strand, within ECD_04036 at 4303.293 kb on - strand, within ECD_04036 at 4303.325 kb on + strand, within ECD_04036 at 4303.325 kb on + strand, within ECD_04036 at 4303.358 kb on + strand, within ECD_04036 at 4303.358 kb on + strand, within ECD_04036 at 4303.359 kb on - strand, within ECD_04036 at 4303.559 kb on - strand, within ECD_04036 at 4303.603 kb on + strand, within ECD_04036 at 4303.608 kb on + strand, within ECD_04036 at 4303.608 kb on + strand, within ECD_04036 at 4303.608 kb on + strand, within ECD_04036 at 4303.615 kb on + strand, within ECD_04036 at 4303.616 kb on - strand, within ECD_04036 at 4303.625 kb on + strand, within ECD_04036 at 4303.657 kb on + strand, within ECD_04036 at 4303.657 kb on + strand, within ECD_04036 at 4303.657 kb on + strand, within ECD_04036 at 4303.658 kb on - strand, within ECD_04036 at 4303.658 kb on - strand, within ECD_04036 at 4303.661 kb on + strand, within ECD_04036 at 4303.662 kb on - strand, within ECD_04036 at 4303.740 kb on - strand, within ECD_04036 at 4303.810 kb on - strand at 4303.810 kb on - strand at 4303.887 kb on - strand at 4303.920 kb on + strand at 4303.949 kb on - strand at 4304.054 kb on + strand at 4304.055 kb on - strand at 4304.058 kb on + strand at 4304.301 kb on + strand, within ECD_04037 at 4304.301 kb on + strand, within ECD_04037 at 4304.332 kb on + strand, within ECD_04037 at 4304.385 kb on + strand, within ECD_04037 at 4304.385 kb on + strand, within ECD_04037 at 4304.386 kb on - strand, within ECD_04037 at 4304.435 kb on + strand, within ECD_04037 at 4304.567 kb on - strand, within ECD_04037 at 4304.695 kb on - strand, within ECD_04037 at 4304.700 kb on + strand, within ECD_04037 at 4304.802 kb on + strand, within ECD_04037 at 4304.803 kb on - strand, within ECD_04037 at 4304.894 kb on + strand, within ECD_04037 at 4304.898 kb on + strand, within ECD_04037 at 4304.899 kb on - strand, within ECD_04037 at 4304.920 kb on + strand, within ECD_04037 at 4304.920 kb on + strand, within ECD_04037 at 4304.921 kb on - strand, within ECD_04037
Per-strain Table
Position Strand Gene LocusTag Fraction Bas50 remove 4,301,733 + ECD_04034 0.74 +0.4 4,301,734 - ECD_04034 0.74 -0.1 4,301,734 - ECD_04034 0.74 -0.8 4,301,769 + ECD_04034 0.76 +0.5 4,301,769 + ECD_04034 0.76 -0.0 4,301,770 - ECD_04034 0.76 +0.0 4,301,770 - ECD_04034 0.76 +1.3 4,301,790 + ECD_04034 0.78 -0.0 4,301,790 + ECD_04034 0.78 +0.8 4,301,791 - ECD_04034 0.78 +0.0 4,301,860 - ECD_04034 0.82 -0.3 4,301,866 + ECD_04034 0.83 -0.5 4,301,926 + ECD_04034 0.87 -0.8 4,301,926 + ECD_04034 0.87 -0.2 4,302,009 + +0.3 4,302,066 + -0.4 4,302,589 + -1.0 4,302,589 + +0.4 4,302,589 + -0.4 4,302,590 - +0.3 4,302,590 - +0.6 4,302,591 + -0.3 4,302,591 + -1.5 4,302,592 - +1.3 4,302,666 - +0.6 4,302,872 - ECD_04036 0.21 +0.1 4,302,939 + ECD_04036 0.26 +0.2 4,302,939 + ECD_04036 0.26 -0.1 4,302,939 + ECD_04036 0.26 +1.5 4,302,939 + ECD_04036 0.26 -0.4 4,302,940 - ECD_04036 0.27 -0.5 4,302,940 - ECD_04036 0.27 +0.5 4,303,080 - ECD_04036 0.37 -0.4 4,303,106 + ECD_04036 0.39 +0.9 4,303,107 - ECD_04036 0.39 -0.8 4,303,107 - ECD_04036 0.39 -0.1 4,303,110 - ECD_04036 0.39 -0.4 4,303,110 - ECD_04036 0.39 -0.5 4,303,154 + ECD_04036 0.43 +0.7 4,303,160 + ECD_04036 0.43 -0.7 4,303,293 - ECD_04036 0.53 +0.5 4,303,325 + ECD_04036 0.55 -0.8 4,303,325 + ECD_04036 0.55 +0.5 4,303,358 + ECD_04036 0.58 -0.4 4,303,358 + ECD_04036 0.58 -0.8 4,303,359 - ECD_04036 0.58 +0.7 4,303,559 - ECD_04036 0.73 -1.3 4,303,603 + ECD_04036 0.76 -0.6 4,303,608 + ECD_04036 0.76 +0.2 4,303,608 + ECD_04036 0.76 -1.4 4,303,608 + ECD_04036 0.76 -0.4 4,303,615 + ECD_04036 0.77 -1.4 4,303,616 - ECD_04036 0.77 +0.8 4,303,625 + ECD_04036 0.78 -0.3 4,303,657 + ECD_04036 0.80 -0.1 4,303,657 + ECD_04036 0.80 -0.5 4,303,657 + ECD_04036 0.80 -0.9 4,303,658 - ECD_04036 0.80 -1.2 4,303,658 - ECD_04036 0.80 -0.6 4,303,661 + ECD_04036 0.80 +1.5 4,303,662 - ECD_04036 0.80 +0.2 4,303,740 - ECD_04036 0.86 +0.2 4,303,810 - -2.2 4,303,810 - +1.4 4,303,887 - +0.2 4,303,920 + +0.1 4,303,949 - +1.0 4,304,054 + -0.8 4,304,055 - -0.1 4,304,058 + -0.3 4,304,301 + ECD_04037 0.20 +0.6 4,304,301 + ECD_04037 0.20 +0.1 4,304,332 + ECD_04037 0.22 +1.8 4,304,385 + ECD_04037 0.25 -0.3 4,304,385 + ECD_04037 0.25 -0.2 4,304,386 - ECD_04037 0.25 +0.9 4,304,435 + ECD_04037 0.27 -0.1 4,304,567 - ECD_04037 0.34 -1.8 4,304,695 - ECD_04037 0.41 +0.5 4,304,700 + ECD_04037 0.42 +0.6 4,304,802 + ECD_04037 0.47 +0.4 4,304,803 - ECD_04037 0.47 +0.3 4,304,894 + ECD_04037 0.52 +0.0 4,304,898 + ECD_04037 0.52 -1.5 4,304,899 - ECD_04037 0.52 -0.8 4,304,920 + ECD_04037 0.53 -1.1 4,304,920 + ECD_04037 0.53 -0.3 4,304,921 - ECD_04037 0.54 +0.6
Or see this region's nucleotide sequence