Experiment: Bas50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03691 and ECD_03692 are separated by 369 nucleotides ECD_03692 and ECD_03693 are separated by 41 nucleotides ECD_03693 and ECD_03694 are separated by 65 nucleotides
ECD_03691: ECD_03691 - DUF2233 family protein, at 3,891,462 to 3,892,226
_03691
ECD_03692: ECD_03692 - magnesium/nickel/cobalt transporter, at 3,892,596 to 3,893,546
_03692
ECD_03693: ECD_03693 - hypothetical protein, at 3,893,588 to 3,894,010
_03693
ECD_03694: ECD_03694 - hypothetical protein, at 3,894,076 to 3,894,924
_03694
Position (kb)
3892
3893
3894 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3891.599 kb on - strand, within ECD_03691 at 3891.663 kb on - strand, within ECD_03691 at 3891.714 kb on - strand, within ECD_03691 at 3891.727 kb on - strand, within ECD_03691 at 3891.832 kb on + strand, within ECD_03691 at 3891.832 kb on + strand, within ECD_03691 at 3891.833 kb on - strand, within ECD_03691 at 3891.833 kb on - strand, within ECD_03691 at 3891.833 kb on - strand, within ECD_03691 at 3891.833 kb on - strand, within ECD_03691 at 3891.917 kb on - strand, within ECD_03691 at 3891.934 kb on + strand, within ECD_03691 at 3891.934 kb on + strand, within ECD_03691 at 3891.935 kb on - strand, within ECD_03691 at 3891.946 kb on + strand, within ECD_03691 at 3891.946 kb on + strand, within ECD_03691 at 3891.946 kb on + strand, within ECD_03691 at 3891.947 kb on - strand, within ECD_03691 at 3891.947 kb on - strand, within ECD_03691 at 3891.986 kb on + strand, within ECD_03691 at 3892.012 kb on - strand, within ECD_03691 at 3892.048 kb on + strand, within ECD_03691 at 3892.049 kb on - strand, within ECD_03691 at 3892.049 kb on - strand, within ECD_03691 at 3892.082 kb on + strand, within ECD_03691 at 3892.083 kb on - strand, within ECD_03691 at 3892.083 kb on - strand, within ECD_03691 at 3892.084 kb on + strand, within ECD_03691 at 3892.084 kb on + strand, within ECD_03691 at 3892.084 kb on + strand, within ECD_03691 at 3892.085 kb on - strand, within ECD_03691 at 3892.085 kb on - strand, within ECD_03691 at 3892.152 kb on + strand at 3892.227 kb on + strand at 3892.229 kb on + strand at 3892.229 kb on + strand at 3892.229 kb on + strand at 3892.229 kb on + strand at 3892.229 kb on + strand at 3892.229 kb on + strand at 3892.230 kb on - strand at 3892.300 kb on + strand at 3892.301 kb on - strand at 3892.350 kb on + strand at 3892.350 kb on + strand at 3892.372 kb on + strand at 3892.372 kb on + strand at 3892.372 kb on + strand at 3892.406 kb on + strand at 3892.406 kb on + strand at 3892.442 kb on + strand at 3892.464 kb on + strand at 3892.522 kb on - strand at 3892.571 kb on - strand at 3892.576 kb on - strand at 3892.877 kb on + strand, within ECD_03692 at 3892.877 kb on + strand, within ECD_03692 at 3892.877 kb on + strand, within ECD_03692 at 3892.877 kb on + strand, within ECD_03692 at 3892.878 kb on - strand, within ECD_03692 at 3892.878 kb on - strand, within ECD_03692 at 3892.878 kb on - strand, within ECD_03692 at 3892.902 kb on - strand, within ECD_03692 at 3892.939 kb on - strand, within ECD_03692 at 3892.939 kb on - strand, within ECD_03692 at 3892.970 kb on - strand, within ECD_03692 at 3893.045 kb on + strand, within ECD_03692 at 3893.046 kb on - strand, within ECD_03692 at 3893.046 kb on - strand, within ECD_03692 at 3893.049 kb on + strand, within ECD_03692 at 3893.049 kb on + strand, within ECD_03692 at 3893.049 kb on + strand, within ECD_03692 at 3893.049 kb on + strand, within ECD_03692 at 3893.081 kb on + strand, within ECD_03692 at 3893.081 kb on + strand, within ECD_03692 at 3893.106 kb on + strand, within ECD_03692 at 3893.106 kb on + strand, within ECD_03692 at 3893.106 kb on + strand, within ECD_03692 at 3893.107 kb on - strand, within ECD_03692 at 3893.208 kb on - strand, within ECD_03692 at 3893.336 kb on + strand, within ECD_03692 at 3893.692 kb on + strand, within ECD_03693 at 3893.983 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas50 remove 3,891,599 - ECD_03691 0.18 -0.3 3,891,663 - ECD_03691 0.26 +0.1 3,891,714 - ECD_03691 0.33 -2.2 3,891,727 - ECD_03691 0.35 +1.7 3,891,832 + ECD_03691 0.48 +0.7 3,891,832 + ECD_03691 0.48 +0.4 3,891,833 - ECD_03691 0.48 -1.0 3,891,833 - ECD_03691 0.48 -0.1 3,891,833 - ECD_03691 0.48 +0.2 3,891,833 - ECD_03691 0.48 -1.0 3,891,917 - ECD_03691 0.59 +0.6 3,891,934 + ECD_03691 0.62 +0.3 3,891,934 + ECD_03691 0.62 -0.9 3,891,935 - ECD_03691 0.62 +0.6 3,891,946 + ECD_03691 0.63 +1.1 3,891,946 + ECD_03691 0.63 -1.0 3,891,946 + ECD_03691 0.63 +0.4 3,891,947 - ECD_03691 0.63 -0.0 3,891,947 - ECD_03691 0.63 -0.6 3,891,986 + ECD_03691 0.68 +0.3 3,892,012 - ECD_03691 0.72 -0.1 3,892,048 + ECD_03691 0.77 -0.4 3,892,049 - ECD_03691 0.77 +0.1 3,892,049 - ECD_03691 0.77 +0.8 3,892,082 + ECD_03691 0.81 -0.3 3,892,083 - ECD_03691 0.81 +0.9 3,892,083 - ECD_03691 0.81 +0.2 3,892,084 + ECD_03691 0.81 -1.4 3,892,084 + ECD_03691 0.81 +0.4 3,892,084 + ECD_03691 0.81 -2.1 3,892,085 - ECD_03691 0.81 +1.0 3,892,085 - ECD_03691 0.81 +0.2 3,892,152 + +0.6 3,892,227 + +0.4 3,892,229 + -0.9 3,892,229 + +1.5 3,892,229 + +1.1 3,892,229 + -0.6 3,892,229 + +0.9 3,892,229 + +0.7 3,892,230 - -1.2 3,892,300 + +0.9 3,892,301 - +0.1 3,892,350 + +2.5 3,892,350 + +0.6 3,892,372 + -1.5 3,892,372 + +0.4 3,892,372 + +0.8 3,892,406 + +0.4 3,892,406 + -0.0 3,892,442 + -0.0 3,892,464 + -1.4 3,892,522 - -0.2 3,892,571 - +0.8 3,892,576 - -1.0 3,892,877 + ECD_03692 0.30 +0.2 3,892,877 + ECD_03692 0.30 -1.1 3,892,877 + ECD_03692 0.30 -0.1 3,892,877 + ECD_03692 0.30 -1.7 3,892,878 - ECD_03692 0.30 +0.8 3,892,878 - ECD_03692 0.30 -1.2 3,892,878 - ECD_03692 0.30 -1.5 3,892,902 - ECD_03692 0.32 -1.7 3,892,939 - ECD_03692 0.36 -2.4 3,892,939 - ECD_03692 0.36 -0.8 3,892,970 - ECD_03692 0.39 +0.8 3,893,045 + ECD_03692 0.47 -0.2 3,893,046 - ECD_03692 0.47 -1.4 3,893,046 - ECD_03692 0.47 +0.0 3,893,049 + ECD_03692 0.48 -0.4 3,893,049 + ECD_03692 0.48 -1.7 3,893,049 + ECD_03692 0.48 -1.8 3,893,049 + ECD_03692 0.48 -1.7 3,893,081 + ECD_03692 0.51 -1.4 3,893,081 + ECD_03692 0.51 -1.0 3,893,106 + ECD_03692 0.54 -3.2 3,893,106 + ECD_03692 0.54 -0.5 3,893,106 + ECD_03692 0.54 -0.8 3,893,107 - ECD_03692 0.54 -1.2 3,893,208 - ECD_03692 0.64 +0.2 3,893,336 + ECD_03692 0.78 -0.1 3,893,692 + ECD_03693 0.25 -1.3 3,893,983 - -0.5
Or see this region's nucleotide sequence