Strain Fitness in Escherichia coli BL21 around ECD_02942

Experiment: Bas50

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02941 and ECD_02942 are separated by 417 nucleotidesECD_02942 and ECD_02943 are separated by 41 nucleotidesECD_02943 and ECD_02944 are separated by 218 nucleotides ECD_02941: ECD_02941 - fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component, at 3,083,638 to 3,085,158 _02941 ECD_02942: ECD_02942 - putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent, at 3,085,576 to 3,086,955 _02942 ECD_02943: ECD_02943 - putative tRNA binding protein; putative tRNA corner chaperone, at 3,086,997 to 3,087,329 _02943 ECD_02944: ECD_02944 - transcriptional repressor, at 3,087,548 to 3,088,531 _02944 Position (kb) 3085 3086 3087Strain fitness (log2 ratio) -2 -1 0 1 2at 3084.589 kb on - strand, within ECD_02941at 3084.590 kb on + strand, within ECD_02941at 3084.590 kb on + strand, within ECD_02941at 3084.590 kb on + strand, within ECD_02941at 3084.590 kb on + strand, within ECD_02941at 3084.590 kb on + strand, within ECD_02941at 3084.590 kb on + strand, within ECD_02941at 3084.591 kb on - strand, within ECD_02941at 3084.591 kb on - strand, within ECD_02941at 3084.591 kb on - strand, within ECD_02941at 3084.591 kb on - strand, within ECD_02941at 3084.591 kb on - strand, within ECD_02941at 3084.591 kb on - strand, within ECD_02941at 3084.639 kb on + strand, within ECD_02941at 3084.639 kb on + strand, within ECD_02941at 3084.696 kb on + strand, within ECD_02941at 3084.729 kb on + strand, within ECD_02941at 3084.736 kb on - strand, within ECD_02941at 3084.736 kb on - strand, within ECD_02941at 3084.742 kb on - strand, within ECD_02941at 3084.825 kb on + strand, within ECD_02941at 3084.825 kb on + strand, within ECD_02941at 3084.826 kb on - strand, within ECD_02941at 3084.826 kb on - strand, within ECD_02941at 3084.826 kb on - strand, within ECD_02941at 3084.827 kb on + strand, within ECD_02941at 3084.827 kb on + strand, within ECD_02941at 3084.828 kb on - strand, within ECD_02941at 3084.828 kb on - strand, within ECD_02941at 3084.828 kb on - strand, within ECD_02941at 3084.828 kb on - strand, within ECD_02941at 3085.015 kb on + strandat 3085.029 kb on + strandat 3085.029 kb on + strandat 3085.030 kb on - strandat 3085.060 kb on - strandat 3085.060 kb on - strandat 3085.060 kb on - strandat 3085.071 kb on + strandat 3085.072 kb on - strandat 3085.072 kb on - strandat 3085.072 kb on - strandat 3085.072 kb on - strandat 3085.073 kb on + strandat 3085.074 kb on - strandat 3085.074 kb on - strandat 3085.074 kb on - strandat 3085.074 kb on - strandat 3085.074 kb on - strandat 3085.074 kb on - strandat 3085.108 kb on - strandat 3085.143 kb on - strandat 3085.143 kb on - strandat 3085.179 kb on - strandat 3085.181 kb on - strandat 3085.532 kb on - strandat 3085.532 kb on - strandat 3085.535 kb on + strandat 3085.586 kb on + strandat 3085.697 kb on - strandat 3085.697 kb on - strandat 3085.727 kb on + strand, within ECD_02942at 3085.772 kb on + strand, within ECD_02942at 3085.773 kb on - strand, within ECD_02942at 3086.017 kb on - strand, within ECD_02942at 3086.088 kb on + strand, within ECD_02942at 3086.095 kb on - strand, within ECD_02942at 3086.176 kb on - strand, within ECD_02942at 3086.312 kb on + strand, within ECD_02942at 3086.313 kb on - strand, within ECD_02942at 3086.345 kb on + strand, within ECD_02942at 3086.349 kb on + strand, within ECD_02942at 3086.349 kb on + strand, within ECD_02942at 3086.349 kb on + strand, within ECD_02942at 3086.350 kb on - strand, within ECD_02942at 3086.350 kb on - strand, within ECD_02942at 3086.350 kb on - strand, within ECD_02942at 3086.350 kb on - strand, within ECD_02942at 3086.354 kb on + strand, within ECD_02942at 3086.354 kb on + strand, within ECD_02942at 3086.355 kb on - strand, within ECD_02942at 3086.355 kb on - strand, within ECD_02942at 3086.355 kb on - strand, within ECD_02942at 3086.393 kb on + strand, within ECD_02942at 3086.447 kb on + strand, within ECD_02942at 3086.447 kb on + strand, within ECD_02942at 3086.447 kb on + strand, within ECD_02942at 3086.447 kb on + strand, within ECD_02942at 3086.448 kb on - strand, within ECD_02942at 3086.448 kb on - strand, within ECD_02942at 3086.562 kb on + strand, within ECD_02942at 3086.562 kb on + strand, within ECD_02942at 3086.562 kb on + strand, within ECD_02942at 3086.563 kb on - strand, within ECD_02942at 3086.668 kb on - strand, within ECD_02942at 3086.781 kb on + strand, within ECD_02942at 3086.937 kb on - strandat 3086.937 kb on - strandat 3087.132 kb on + strand, within ECD_02943at 3087.133 kb on - strand, within ECD_02943at 3087.133 kb on - strand, within ECD_02943at 3087.175 kb on + strand, within ECD_02943at 3087.228 kb on + strand, within ECD_02943at 3087.229 kb on - strand, within ECD_02943at 3087.236 kb on - strand, within ECD_02943at 3087.314 kb on - strandat 3087.508 kb on - strandat 3087.559 kb on - strandat 3087.600 kb on + strandat 3087.601 kb on - strandat 3087.612 kb on + strandat 3087.612 kb on + strandat 3087.612 kb on + strandat 3087.613 kb on - strandat 3087.739 kb on + strand, within ECD_02944at 3087.739 kb on + strand, within ECD_02944at 3087.740 kb on - strand, within ECD_02944at 3087.740 kb on - strand, within ECD_02944at 3087.749 kb on - strand, within ECD_02944at 3087.752 kb on + strand, within ECD_02944at 3087.752 kb on + strand, within ECD_02944at 3087.752 kb on + strand, within ECD_02944at 3087.752 kb on + strand, within ECD_02944at 3087.752 kb on + strand, within ECD_02944at 3087.752 kb on + strand, within ECD_02944at 3087.752 kb on + strand, within ECD_02944at 3087.752 kb on + strand, within ECD_02944at 3087.753 kb on - strand, within ECD_02944at 3087.753 kb on - strand, within ECD_02944at 3087.759 kb on - strand, within ECD_02944at 3087.788 kb on + strand, within ECD_02944at 3087.789 kb on - strand, within ECD_02944at 3087.792 kb on - strand, within ECD_02944at 3087.873 kb on + strand, within ECD_02944at 3087.883 kb on + strand, within ECD_02944at 3087.903 kb on + strand, within ECD_02944at 3087.903 kb on + strand, within ECD_02944at 3087.903 kb on + strand, within ECD_02944

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas50
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3,084,589 - ECD_02941 0.63 +0.6
3,084,590 + ECD_02941 0.63 +0.9
3,084,590 + ECD_02941 0.63 -0.5
3,084,590 + ECD_02941 0.63 +0.0
3,084,590 + ECD_02941 0.63 +1.1
3,084,590 + ECD_02941 0.63 +0.3
3,084,590 + ECD_02941 0.63 +0.4
3,084,591 - ECD_02941 0.63 +0.2
3,084,591 - ECD_02941 0.63 -0.5
3,084,591 - ECD_02941 0.63 +0.5
3,084,591 - ECD_02941 0.63 +0.1
3,084,591 - ECD_02941 0.63 -1.5
3,084,591 - ECD_02941 0.63 -0.9
3,084,639 + ECD_02941 0.66 -0.5
3,084,639 + ECD_02941 0.66 +0.0
3,084,696 + ECD_02941 0.70 +1.1
3,084,729 + ECD_02941 0.72 +1.1
3,084,736 - ECD_02941 0.72 +0.5
3,084,736 - ECD_02941 0.72 +0.2
3,084,742 - ECD_02941 0.73 -0.5
3,084,825 + ECD_02941 0.78 -1.0
3,084,825 + ECD_02941 0.78 +1.5
3,084,826 - ECD_02941 0.78 +0.9
3,084,826 - ECD_02941 0.78 +0.7
3,084,826 - ECD_02941 0.78 +0.9
3,084,827 + ECD_02941 0.78 -1.5
3,084,827 + ECD_02941 0.78 +0.5
3,084,828 - ECD_02941 0.78 +0.3
3,084,828 - ECD_02941 0.78 +1.0
3,084,828 - ECD_02941 0.78 -0.0
3,084,828 - ECD_02941 0.78 -0.2
3,085,015 + +1.4
3,085,029 + +0.8
3,085,029 + -0.1
3,085,030 - +0.5
3,085,060 - +1.5
3,085,060 - +0.7
3,085,060 - -0.5
3,085,071 + +0.5
3,085,072 - +0.7
3,085,072 - -0.5
3,085,072 - -0.2
3,085,072 - -0.2
3,085,073 + -0.3
3,085,074 - -0.5
3,085,074 - -1.6
3,085,074 - +0.3
3,085,074 - -0.2
3,085,074 - -0.1
3,085,074 - +0.8
3,085,108 - -0.3
3,085,143 - -1.8
3,085,143 - -1.7
3,085,179 - +0.5
3,085,181 - +0.3
3,085,532 - -2.2
3,085,532 - +0.5
3,085,535 + -0.9
3,085,586 + +0.0
3,085,697 - -0.2
3,085,697 - -0.4
3,085,727 + ECD_02942 0.11 -0.4
3,085,772 + ECD_02942 0.14 -0.6
3,085,773 - ECD_02942 0.14 -0.3
3,086,017 - ECD_02942 0.32 -0.2
3,086,088 + ECD_02942 0.37 +0.3
3,086,095 - ECD_02942 0.38 -0.1
3,086,176 - ECD_02942 0.43 -0.3
3,086,312 + ECD_02942 0.53 -0.7
3,086,313 - ECD_02942 0.53 -0.0
3,086,345 + ECD_02942 0.56 -0.3
3,086,349 + ECD_02942 0.56 +0.3
3,086,349 + ECD_02942 0.56 +0.2
3,086,349 + ECD_02942 0.56 -1.0
3,086,350 - ECD_02942 0.56 -0.8
3,086,350 - ECD_02942 0.56 +0.6
3,086,350 - ECD_02942 0.56 -0.2
3,086,350 - ECD_02942 0.56 +0.3
3,086,354 + ECD_02942 0.56 +0.6
3,086,354 + ECD_02942 0.56 +0.1
3,086,355 - ECD_02942 0.56 +1.3
3,086,355 - ECD_02942 0.56 -0.4
3,086,355 - ECD_02942 0.56 -1.8
3,086,393 + ECD_02942 0.59 -0.5
3,086,447 + ECD_02942 0.63 -0.0
3,086,447 + ECD_02942 0.63 -0.1
3,086,447 + ECD_02942 0.63 +0.3
3,086,447 + ECD_02942 0.63 +0.5
3,086,448 - ECD_02942 0.63 +0.7
3,086,448 - ECD_02942 0.63 +0.7
3,086,562 + ECD_02942 0.71 +0.4
3,086,562 + ECD_02942 0.71 +1.0
3,086,562 + ECD_02942 0.71 +0.6
3,086,563 - ECD_02942 0.72 +0.5
3,086,668 - ECD_02942 0.79 +0.3
3,086,781 + ECD_02942 0.87 -0.5
3,086,937 - -0.4
3,086,937 - -0.0
3,087,132 + ECD_02943 0.41 -1.3
3,087,133 - ECD_02943 0.41 -0.4
3,087,133 - ECD_02943 0.41 +2.1
3,087,175 + ECD_02943 0.53 -0.9
3,087,228 + ECD_02943 0.69 +1.1
3,087,229 - ECD_02943 0.70 -0.5
3,087,236 - ECD_02943 0.72 -0.1
3,087,314 - -1.3
3,087,508 - +0.4
3,087,559 - +0.7
3,087,600 + +0.5
3,087,601 - +1.1
3,087,612 + -0.4
3,087,612 + +1.5
3,087,612 + -0.7
3,087,613 - -0.5
3,087,739 + ECD_02944 0.19 -0.2
3,087,739 + ECD_02944 0.19 +0.7
3,087,740 - ECD_02944 0.20 +0.9
3,087,740 - ECD_02944 0.20 +0.8
3,087,749 - ECD_02944 0.20 -0.5
3,087,752 + ECD_02944 0.21 +0.7
3,087,752 + ECD_02944 0.21 +0.6
3,087,752 + ECD_02944 0.21 -0.6
3,087,752 + ECD_02944 0.21 +0.2
3,087,752 + ECD_02944 0.21 -1.0
3,087,752 + ECD_02944 0.21 +0.5
3,087,752 + ECD_02944 0.21 -0.5
3,087,752 + ECD_02944 0.21 +0.5
3,087,753 - ECD_02944 0.21 +0.7
3,087,753 - ECD_02944 0.21 +1.3
3,087,759 - ECD_02944 0.21 +1.3
3,087,788 + ECD_02944 0.24 -0.3
3,087,789 - ECD_02944 0.24 -0.6
3,087,792 - ECD_02944 0.25 -0.8
3,087,873 + ECD_02944 0.33 +0.2
3,087,883 + ECD_02944 0.34 -0.2
3,087,903 + ECD_02944 0.36 +0.1
3,087,903 + ECD_02944 0.36 -0.8
3,087,903 + ECD_02944 0.36 +0.2

Or see this region's nucleotide sequence