Experiment: Bas50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02910 and ECD_02911 are separated by 37 nucleotides ECD_02911 and ECD_02912 are separated by 115 nucleotides ECD_02912 and ECD_04362 are separated by 57 nucleotides
ECD_02910: ECD_02910 - ATP-Grasp family ATPase, at 3,047,858 to 3,049,018
_02910
ECD_02911: ECD_02911 - 4,5- DOPA-extradiol-dioxygenase, at 3,049,056 to 3,049,871
_02911
ECD_02912: ECD_02912 - zinc transporter, at 3,049,987 to 3,050,760
_02912
ECD_04362: ECD_04362 - hypothetical protein, at 3,050,818 to 3,050,988
_04362
Position (kb)
3049
3050 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3048.149 kb on + strand, within ECD_02910 at 3048.230 kb on + strand, within ECD_02910 at 3048.557 kb on + strand, within ECD_02910 at 3048.646 kb on + strand, within ECD_02910 at 3048.752 kb on + strand, within ECD_02910 at 3048.899 kb on + strand, within ECD_02910 at 3048.899 kb on + strand, within ECD_02910 at 3048.899 kb on + strand, within ECD_02910 at 3048.901 kb on + strand, within ECD_02910 at 3048.901 kb on + strand, within ECD_02910 at 3048.982 kb on + strand at 3049.017 kb on - strand at 3049.051 kb on - strand at 3049.079 kb on + strand at 3049.080 kb on - strand at 3049.080 kb on - strand at 3049.080 kb on - strand at 3049.098 kb on + strand at 3049.099 kb on - strand at 3049.119 kb on - strand at 3049.146 kb on + strand, within ECD_02911 at 3049.147 kb on - strand, within ECD_02911 at 3049.153 kb on + strand, within ECD_02911 at 3049.153 kb on + strand, within ECD_02911 at 3049.153 kb on + strand, within ECD_02911 at 3049.153 kb on + strand, within ECD_02911 at 3049.154 kb on - strand, within ECD_02911 at 3049.168 kb on + strand, within ECD_02911 at 3049.169 kb on - strand, within ECD_02911 at 3049.169 kb on - strand, within ECD_02911 at 3049.169 kb on - strand, within ECD_02911 at 3049.217 kb on - strand, within ECD_02911 at 3049.273 kb on + strand, within ECD_02911 at 3049.273 kb on + strand, within ECD_02911 at 3049.274 kb on - strand, within ECD_02911 at 3049.274 kb on - strand, within ECD_02911 at 3049.310 kb on + strand, within ECD_02911 at 3049.310 kb on + strand, within ECD_02911 at 3049.311 kb on - strand, within ECD_02911 at 3049.311 kb on - strand, within ECD_02911 at 3049.372 kb on - strand, within ECD_02911 at 3049.372 kb on - strand, within ECD_02911 at 3049.372 kb on - strand, within ECD_02911 at 3049.481 kb on - strand, within ECD_02911 at 3049.481 kb on - strand, within ECD_02911 at 3049.488 kb on - strand, within ECD_02911 at 3049.488 kb on - strand, within ECD_02911 at 3049.771 kb on + strand, within ECD_02911 at 3049.813 kb on - strand at 3049.829 kb on + strand at 3049.829 kb on + strand at 3049.829 kb on + strand at 3049.830 kb on - strand at 3049.830 kb on - strand at 3049.830 kb on - strand at 3049.856 kb on + strand at 3049.861 kb on - strand at 3049.861 kb on - strand at 3049.861 kb on - strand at 3049.888 kb on + strand at 3049.888 kb on + strand at 3049.889 kb on - strand at 3049.973 kb on - strand at 3050.156 kb on + strand, within ECD_02912 at 3050.219 kb on - strand, within ECD_02912 at 3050.522 kb on + strand, within ECD_02912 at 3050.555 kb on + strand, within ECD_02912 at 3050.619 kb on + strand, within ECD_02912 at 3050.619 kb on + strand, within ECD_02912 at 3050.620 kb on - strand, within ECD_02912 at 3050.645 kb on + strand, within ECD_02912 at 3050.673 kb on + strand, within ECD_02912 at 3050.676 kb on + strand, within ECD_02912 at 3050.676 kb on + strand, within ECD_02912 at 3050.677 kb on - strand, within ECD_02912 at 3050.677 kb on - strand, within ECD_02912 at 3050.696 kb on + strand at 3050.696 kb on + strand at 3050.696 kb on + strand at 3050.696 kb on + strand at 3050.696 kb on + strand at 3050.699 kb on + strand at 3050.699 kb on + strand at 3050.699 kb on + strand at 3050.700 kb on - strand at 3050.700 kb on - strand at 3050.820 kb on - strand at 3050.820 kb on - strand at 3050.820 kb on - strand at 3050.851 kb on - strand, within ECD_04362 at 3050.858 kb on - strand, within ECD_04362
Per-strain Table
Position Strand Gene LocusTag Fraction Bas50 remove 3,048,149 + ECD_02910 0.25 +0.7 3,048,230 + ECD_02910 0.32 -0.1 3,048,557 + ECD_02910 0.60 +1.0 3,048,646 + ECD_02910 0.68 -1.1 3,048,752 + ECD_02910 0.77 +1.7 3,048,899 + ECD_02910 0.90 -0.1 3,048,899 + ECD_02910 0.90 +0.5 3,048,899 + ECD_02910 0.90 +1.0 3,048,901 + ECD_02910 0.90 +0.7 3,048,901 + ECD_02910 0.90 +1.2 3,048,982 + -0.6 3,049,017 - +0.5 3,049,051 - +0.5 3,049,079 + +0.5 3,049,080 - +2.0 3,049,080 - +0.1 3,049,080 - -0.1 3,049,098 + +1.2 3,049,099 - +0.1 3,049,119 - +0.5 3,049,146 + ECD_02911 0.11 +2.1 3,049,147 - ECD_02911 0.11 +0.2 3,049,153 + ECD_02911 0.12 +1.3 3,049,153 + ECD_02911 0.12 -0.6 3,049,153 + ECD_02911 0.12 +0.5 3,049,153 + ECD_02911 0.12 +0.7 3,049,154 - ECD_02911 0.12 +0.4 3,049,168 + ECD_02911 0.14 +2.0 3,049,169 - ECD_02911 0.14 -1.6 3,049,169 - ECD_02911 0.14 -0.2 3,049,169 - ECD_02911 0.14 +0.0 3,049,217 - ECD_02911 0.20 -0.2 3,049,273 + ECD_02911 0.27 -1.1 3,049,273 + ECD_02911 0.27 -0.1 3,049,274 - ECD_02911 0.27 -1.8 3,049,274 - ECD_02911 0.27 +0.3 3,049,310 + ECD_02911 0.31 +0.0 3,049,310 + ECD_02911 0.31 +0.5 3,049,311 - ECD_02911 0.31 +1.0 3,049,311 - ECD_02911 0.31 +1.5 3,049,372 - ECD_02911 0.39 +0.4 3,049,372 - ECD_02911 0.39 +0.8 3,049,372 - ECD_02911 0.39 -0.4 3,049,481 - ECD_02911 0.52 +0.1 3,049,481 - ECD_02911 0.52 -0.1 3,049,488 - ECD_02911 0.53 +0.9 3,049,488 - ECD_02911 0.53 -0.2 3,049,771 + ECD_02911 0.88 +0.3 3,049,813 - +0.1 3,049,829 + -1.1 3,049,829 + -0.1 3,049,829 + +0.7 3,049,830 - +0.1 3,049,830 - +0.4 3,049,830 - -0.1 3,049,856 + -0.3 3,049,861 - +1.7 3,049,861 - -0.5 3,049,861 - +0.1 3,049,888 + -0.1 3,049,888 + +0.7 3,049,889 - +1.2 3,049,973 - +0.1 3,050,156 + ECD_02912 0.22 -0.5 3,050,219 - ECD_02912 0.30 -0.7 3,050,522 + ECD_02912 0.69 -0.5 3,050,555 + ECD_02912 0.73 -1.6 3,050,619 + ECD_02912 0.82 +0.5 3,050,619 + ECD_02912 0.82 -0.1 3,050,620 - ECD_02912 0.82 -0.2 3,050,645 + ECD_02912 0.85 +0.8 3,050,673 + ECD_02912 0.89 -1.3 3,050,676 + ECD_02912 0.89 -1.4 3,050,676 + ECD_02912 0.89 +1.3 3,050,677 - ECD_02912 0.89 +0.0 3,050,677 - ECD_02912 0.89 -0.3 3,050,696 + +0.1 3,050,696 + +1.3 3,050,696 + +1.8 3,050,696 + +0.5 3,050,696 + +0.8 3,050,699 + -0.7 3,050,699 + +0.9 3,050,699 + +0.2 3,050,700 - +0.5 3,050,700 - +0.6 3,050,820 - +0.3 3,050,820 - -0.8 3,050,820 - -1.6 3,050,851 - ECD_04362 0.19 +1.2 3,050,858 - ECD_04362 0.23 -0.5
Or see this region's nucleotide sequence