Experiment: Bas50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02344 and ECD_02345 overlap by 11 nucleotides ECD_02345 and ECD_02346 are separated by 10 nucleotides
ECD_02344: ECD_02344 - ethanol dehydrogenase involved in ethanolamine utilization; aldehyde reductase, at 2,432,814 to 2,434,001
_02344
ECD_02345: ECD_02345 - ethanolamine utilization protein, HSP70/actin superfamily protein, at 2,433,991 to 2,434,827
_02345
ECD_02346: ECD_02346 - aldehyde oxidoreductase, ethanolamine utilization protein, at 2,434,838 to 2,436,241
_02346
Position (kb)
2433
2434
2435 Strain fitness (log2 ratio)
-1
0
1 at 2433.021 kb on - strand, within ECD_02344 at 2433.126 kb on - strand, within ECD_02344 at 2433.217 kb on - strand, within ECD_02344 at 2433.340 kb on + strand, within ECD_02344 at 2433.340 kb on + strand, within ECD_02344 at 2433.340 kb on + strand, within ECD_02344 at 2433.341 kb on - strand, within ECD_02344 at 2433.492 kb on - strand, within ECD_02344 at 2433.501 kb on + strand, within ECD_02344 at 2434.003 kb on + strand at 2434.003 kb on + strand at 2434.004 kb on - strand at 2434.004 kb on - strand at 2434.054 kb on - strand at 2434.073 kb on - strand at 2434.259 kb on + strand, within ECD_02345 at 2434.507 kb on - strand, within ECD_02345 at 2434.865 kb on + strand at 2435.421 kb on - strand, within ECD_02346 at 2435.567 kb on - strand, within ECD_02346 at 2435.582 kb on + strand, within ECD_02346 at 2435.812 kb on + strand, within ECD_02346
Per-strain Table
Position Strand Gene LocusTag Fraction Bas50 remove 2,433,021 - ECD_02344 0.17 +0.2 2,433,126 - ECD_02344 0.26 -0.3 2,433,217 - ECD_02344 0.34 +0.7 2,433,340 + ECD_02344 0.44 +0.5 2,433,340 + ECD_02344 0.44 -1.2 2,433,340 + ECD_02344 0.44 -0.9 2,433,341 - ECD_02344 0.44 +0.9 2,433,492 - ECD_02344 0.57 -0.6 2,433,501 + ECD_02344 0.58 +0.4 2,434,003 + -0.3 2,434,003 + -0.5 2,434,004 - -0.3 2,434,004 - -0.3 2,434,054 - +0.4 2,434,073 - +0.0 2,434,259 + ECD_02345 0.32 +1.6 2,434,507 - ECD_02345 0.62 +0.2 2,434,865 + -0.1 2,435,421 - ECD_02346 0.42 -1.3 2,435,567 - ECD_02346 0.52 +0.9 2,435,582 + ECD_02346 0.53 -0.2 2,435,812 + ECD_02346 0.69 +0.4
Or see this region's nucleotide sequence