Strain Fitness in Escherichia coli BL21 around ECD_00996

Experiment: Bas50

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00995 and ECD_00996 are separated by 71 nucleotidesECD_00996 and ECD_00997 are separated by 82 nucleotides ECD_00995: ECD_00995 - putative 4Fe-4S membrane protein, at 1,056,577 to 1,057,650 _00995 ECD_00996: ECD_00996 - hybrid sensory histidine kinase in two-component regulatory system with TorR, at 1,057,722 to 1,060,466 _00996 ECD_00997: ECD_00997 - periplasmic sensory protein associated with the TorRS two-component regulatory system, at 1,060,549 to 1,061,577 _00997 Position (kb) 1057 1058 1059 1060 1061Strain fitness (log2 ratio) -2 -1 0 1 2at 1056.816 kb on + strand, within ECD_00995at 1057.054 kb on - strand, within ECD_00995at 1057.384 kb on + strand, within ECD_00995at 1057.485 kb on - strand, within ECD_00995at 1057.485 kb on - strand, within ECD_00995at 1057.522 kb on - strand, within ECD_00995at 1057.541 kb on - strand, within ECD_00995at 1057.836 kb on + strandat 1058.409 kb on + strand, within ECD_00996at 1058.574 kb on - strand, within ECD_00996at 1058.720 kb on + strand, within ECD_00996at 1058.725 kb on + strand, within ECD_00996at 1058.816 kb on + strand, within ECD_00996at 1058.886 kb on - strand, within ECD_00996at 1059.183 kb on + strand, within ECD_00996at 1060.036 kb on - strand, within ECD_00996at 1060.317 kb on - strandat 1060.518 kb on - strandat 1060.720 kb on + strand, within ECD_00997at 1060.738 kb on + strand, within ECD_00997at 1060.941 kb on - strand, within ECD_00997at 1061.143 kb on - strand, within ECD_00997at 1061.151 kb on + strand, within ECD_00997

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas50
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1,056,816 + ECD_00995 0.22 -0.3
1,057,054 - ECD_00995 0.44 +1.0
1,057,384 + ECD_00995 0.75 +0.2
1,057,485 - ECD_00995 0.85 -0.6
1,057,485 - ECD_00995 0.85 +0.9
1,057,522 - ECD_00995 0.88 +0.8
1,057,541 - ECD_00995 0.90 -0.4
1,057,836 + +0.8
1,058,409 + ECD_00996 0.25 +1.8
1,058,574 - ECD_00996 0.31 -0.2
1,058,720 + ECD_00996 0.36 -0.0
1,058,725 + ECD_00996 0.37 -0.0
1,058,816 + ECD_00996 0.40 +1.0
1,058,886 - ECD_00996 0.42 +0.8
1,059,183 + ECD_00996 0.53 +1.9
1,060,036 - ECD_00996 0.84 +0.8
1,060,317 - +1.3
1,060,518 - +1.4
1,060,720 + ECD_00997 0.17 -0.0
1,060,738 + ECD_00997 0.18 -0.3
1,060,941 - ECD_00997 0.38 -2.7
1,061,143 - ECD_00997 0.58 -1.3
1,061,151 + ECD_00997 0.59 -0.6

Or see this region's nucleotide sequence