Experiment: Bas50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00611 and ECD_00612 are separated by 234 nucleotides
ECD_00611: ECD_00611 - leucyl-tRNA synthetase, at 632,564 to 635,146
_00611
ECD_00612: ECD_00612 - DUF1451 family protein, at 635,381 to 635,863
_00612
Position (kb)
635
636 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 635.281 kb on + strand at 635.344 kb on - strand at 635.347 kb on - strand at 635.349 kb on + strand at 635.350 kb on - strand at 635.399 kb on + strand at 635.400 kb on - strand at 635.402 kb on + strand at 635.576 kb on + strand, within ECD_00612 at 635.739 kb on + strand, within ECD_00612 at 636.054 kb on + strand at 636.055 kb on - strand at 636.055 kb on - strand at 636.071 kb on - strand at 636.160 kb on + strand at 636.160 kb on + strand at 636.162 kb on + strand at 636.162 kb on + strand at 636.163 kb on - strand at 636.163 kb on - strand at 636.166 kb on + strand at 636.166 kb on + strand at 636.166 kb on + strand at 636.167 kb on - strand at 636.167 kb on - strand at 636.167 kb on - strand at 636.183 kb on + strand at 636.225 kb on + strand at 636.226 kb on - strand at 636.226 kb on - strand at 636.238 kb on + strand at 636.241 kb on - strand at 636.241 kb on - strand at 636.271 kb on - strand at 636.271 kb on - strand at 636.410 kb on - strand at 636.457 kb on - strand at 636.543 kb on + strand at 636.562 kb on + strand at 636.674 kb on - strand at 636.674 kb on - strand at 636.760 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas50 remove 635,281 + +0.9 635,344 - +0.5 635,347 - +0.6 635,349 + +0.8 635,350 - -0.1 635,399 + +0.0 635,400 - -0.2 635,402 + +0.2 635,576 + ECD_00612 0.40 -0.6 635,739 + ECD_00612 0.74 -0.3 636,054 + -0.7 636,055 - +1.1 636,055 - -2.4 636,071 - -0.8 636,160 + -1.3 636,160 + -0.1 636,162 + -1.6 636,162 + +1.1 636,163 - -0.1 636,163 - +0.2 636,166 + -0.1 636,166 + +0.2 636,166 + -0.7 636,167 - +0.0 636,167 - -1.7 636,167 - -0.4 636,183 + +0.1 636,225 + +0.8 636,226 - +0.9 636,226 - +0.8 636,238 + -0.3 636,241 - +1.3 636,241 - +0.9 636,271 - -0.1 636,271 - +0.3 636,410 - +2.0 636,457 - +0.2 636,543 + +0.9 636,562 + -0.8 636,674 - +0.8 636,674 - -1.1 636,760 - -1.2
Or see this region's nucleotide sequence