Strain Fitness in Escherichia coli BL21 around ECD_02956

Experiment: Bas50

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02954 and ECD_02955 are separated by 76 nucleotidesECD_02955 and ECD_02956 are separated by 78 nucleotidesECD_02956 and ECD_02957 are separated by 282 nucleotides ECD_02954: ECD_02954 - putative metal dependent hydrolase, at 3,102,042 to 3,102,545 _02954 ECD_02955: ECD_02955 - DUF218 superfamily protein, at 3,102,622 to 3,103,314 _02955 ECD_02956: ECD_02956 - putative NAD(P)-dependent dehydrogenase, at 3,103,393 to 3,104,379 _02956 ECD_02957: ECD_02957 - putative membrane-bound redox modulator, at 3,104,662 to 3,105,627 _02957 Position (kb) 3103 3104 3105Strain fitness (log2 ratio) -2 -1 0 1at 3102.448 kb on - strand, within ECD_02954at 3102.465 kb on - strand, within ECD_02954at 3102.655 kb on - strandat 3102.655 kb on - strandat 3102.692 kb on + strand, within ECD_02955at 3102.692 kb on + strand, within ECD_02955at 3102.698 kb on + strand, within ECD_02955at 3102.698 kb on + strand, within ECD_02955at 3102.698 kb on + strand, within ECD_02955at 3102.698 kb on + strand, within ECD_02955at 3102.699 kb on - strand, within ECD_02955at 3102.806 kb on + strand, within ECD_02955at 3102.807 kb on - strand, within ECD_02955at 3102.841 kb on - strand, within ECD_02955at 3102.849 kb on + strand, within ECD_02955at 3102.850 kb on - strand, within ECD_02955at 3102.871 kb on + strand, within ECD_02955at 3102.872 kb on - strand, within ECD_02955at 3102.872 kb on - strand, within ECD_02955at 3102.903 kb on - strand, within ECD_02955at 3102.903 kb on - strand, within ECD_02955at 3102.903 kb on - strand, within ECD_02955at 3102.903 kb on - strand, within ECD_02955at 3102.903 kb on - strand, within ECD_02955at 3102.945 kb on + strand, within ECD_02955at 3102.945 kb on + strand, within ECD_02955at 3102.945 kb on + strand, within ECD_02955at 3102.946 kb on - strand, within ECD_02955at 3103.071 kb on + strand, within ECD_02955at 3103.072 kb on - strand, within ECD_02955at 3103.072 kb on - strand, within ECD_02955at 3103.180 kb on - strand, within ECD_02955at 3103.252 kb on + strandat 3103.252 kb on + strandat 3103.313 kb on - strandat 3103.319 kb on + strandat 3103.320 kb on - strandat 3103.352 kb on + strandat 3103.352 kb on + strandat 3103.352 kb on + strandat 3103.353 kb on - strandat 3103.353 kb on - strandat 3103.353 kb on - strandat 3103.374 kb on + strandat 3103.397 kb on + strandat 3103.397 kb on + strandat 3103.398 kb on - strandat 3103.398 kb on - strandat 3103.468 kb on + strandat 3103.468 kb on + strandat 3103.468 kb on + strandat 3103.468 kb on + strandat 3103.484 kb on + strandat 3103.485 kb on - strandat 3103.548 kb on + strand, within ECD_02956at 3103.595 kb on - strand, within ECD_02956at 3103.595 kb on - strand, within ECD_02956at 3103.595 kb on - strand, within ECD_02956at 3103.595 kb on - strand, within ECD_02956at 3103.596 kb on + strand, within ECD_02956at 3103.651 kb on - strand, within ECD_02956at 3103.656 kb on + strand, within ECD_02956at 3103.837 kb on + strand, within ECD_02956at 3103.838 kb on - strand, within ECD_02956at 3103.847 kb on - strand, within ECD_02956at 3103.847 kb on - strand, within ECD_02956at 3103.867 kb on + strand, within ECD_02956at 3103.911 kb on + strand, within ECD_02956at 3103.964 kb on + strand, within ECD_02956at 3103.964 kb on + strand, within ECD_02956at 3104.018 kb on + strand, within ECD_02956at 3104.217 kb on + strand, within ECD_02956at 3104.218 kb on - strand, within ECD_02956at 3104.218 kb on - strand, within ECD_02956at 3104.218 kb on - strand, within ECD_02956at 3104.218 kb on - strand, within ECD_02956at 3104.220 kb on + strand, within ECD_02956at 3104.220 kb on + strand, within ECD_02956at 3104.220 kb on + strand, within ECD_02956at 3104.220 kb on + strand, within ECD_02956at 3104.221 kb on - strand, within ECD_02956at 3104.221 kb on - strand, within ECD_02956at 3104.221 kb on - strand, within ECD_02956at 3104.223 kb on + strand, within ECD_02956at 3104.224 kb on - strand, within ECD_02956at 3104.224 kb on - strand, within ECD_02956at 3104.224 kb on - strand, within ECD_02956at 3104.365 kb on - strandat 3104.370 kb on - strandat 3104.407 kb on - strandat 3104.410 kb on + strandat 3104.411 kb on - strandat 3104.411 kb on - strandat 3104.443 kb on + strandat 3104.452 kb on - strandat 3104.493 kb on + strandat 3104.493 kb on + strandat 3104.541 kb on + strandat 3104.552 kb on - strandat 3104.552 kb on - strandat 3104.552 kb on - strandat 3104.552 kb on - strandat 3104.567 kb on + strandat 3104.567 kb on + strandat 3104.568 kb on - strandat 3104.568 kb on - strandat 3104.568 kb on - strandat 3104.596 kb on + strandat 3104.596 kb on + strandat 3104.596 kb on + strandat 3104.596 kb on + strandat 3104.596 kb on + strandat 3104.596 kb on + strandat 3104.603 kb on - strandat 3104.650 kb on + strandat 3104.650 kb on + strandat 3104.650 kb on + strandat 3104.650 kb on + strandat 3104.650 kb on + strandat 3104.650 kb on + strandat 3104.651 kb on - strandat 3104.651 kb on - strandat 3104.651 kb on - strandat 3104.661 kb on + strandat 3104.661 kb on + strandat 3104.661 kb on + strandat 3104.662 kb on - strandat 3104.688 kb on - strandat 3104.688 kb on - strandat 3104.718 kb on + strandat 3104.826 kb on + strand, within ECD_02957at 3104.845 kb on + strand, within ECD_02957at 3104.845 kb on + strand, within ECD_02957at 3104.845 kb on + strand, within ECD_02957at 3104.846 kb on - strand, within ECD_02957at 3104.969 kb on - strand, within ECD_02957at 3104.990 kb on + strand, within ECD_02957at 3105.010 kb on + strand, within ECD_02957at 3105.011 kb on - strand, within ECD_02957at 3105.039 kb on + strand, within ECD_02957at 3105.095 kb on - strand, within ECD_02957at 3105.095 kb on - strand, within ECD_02957at 3105.096 kb on + strand, within ECD_02957at 3105.096 kb on + strand, within ECD_02957at 3105.096 kb on + strand, within ECD_02957at 3105.097 kb on - strand, within ECD_02957at 3105.097 kb on - strand, within ECD_02957at 3105.097 kb on - strand, within ECD_02957at 3105.246 kb on + strand, within ECD_02957at 3105.246 kb on + strand, within ECD_02957at 3105.247 kb on - strand, within ECD_02957at 3105.247 kb on - strand, within ECD_02957

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas50
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3,102,448 - ECD_02954 0.81 -0.1
3,102,465 - ECD_02954 0.84 -2.1
3,102,655 - +0.4
3,102,655 - -0.4
3,102,692 + ECD_02955 0.10 -0.8
3,102,692 + ECD_02955 0.10 -0.9
3,102,698 + ECD_02955 0.11 -0.5
3,102,698 + ECD_02955 0.11 -0.1
3,102,698 + ECD_02955 0.11 +0.4
3,102,698 + ECD_02955 0.11 +0.6
3,102,699 - ECD_02955 0.11 -0.2
3,102,806 + ECD_02955 0.27 -0.3
3,102,807 - ECD_02955 0.27 -0.3
3,102,841 - ECD_02955 0.32 +0.0
3,102,849 + ECD_02955 0.33 +0.6
3,102,850 - ECD_02955 0.33 -0.5
3,102,871 + ECD_02955 0.36 +0.2
3,102,872 - ECD_02955 0.36 -0.7
3,102,872 - ECD_02955 0.36 -1.2
3,102,903 - ECD_02955 0.41 +0.5
3,102,903 - ECD_02955 0.41 -0.4
3,102,903 - ECD_02955 0.41 +0.2
3,102,903 - ECD_02955 0.41 -2.3
3,102,903 - ECD_02955 0.41 -0.0
3,102,945 + ECD_02955 0.47 +0.6
3,102,945 + ECD_02955 0.47 +0.8
3,102,945 + ECD_02955 0.47 -0.2
3,102,946 - ECD_02955 0.47 -0.4
3,103,071 + ECD_02955 0.65 +0.7
3,103,072 - ECD_02955 0.65 +0.2
3,103,072 - ECD_02955 0.65 +0.1
3,103,180 - ECD_02955 0.81 -0.7
3,103,252 + -0.9
3,103,252 + +0.1
3,103,313 - +0.5
3,103,319 + +0.1
3,103,320 - -2.1
3,103,352 + -0.3
3,103,352 + +1.1
3,103,352 + +0.4
3,103,353 - +0.4
3,103,353 - -0.9
3,103,353 - +0.0
3,103,374 + -0.2
3,103,397 + +0.9
3,103,397 + -0.8
3,103,398 - +0.2
3,103,398 - -0.6
3,103,468 + -0.6
3,103,468 + +0.6
3,103,468 + -1.4
3,103,468 + +0.4
3,103,484 + -2.0
3,103,485 - +0.4
3,103,548 + ECD_02956 0.16 +0.7
3,103,595 - ECD_02956 0.20 -0.5
3,103,595 - ECD_02956 0.20 +0.8
3,103,595 - ECD_02956 0.20 -0.5
3,103,595 - ECD_02956 0.20 -0.6
3,103,596 + ECD_02956 0.21 +1.4
3,103,651 - ECD_02956 0.26 -1.0
3,103,656 + ECD_02956 0.27 -0.7
3,103,837 + ECD_02956 0.45 -0.2
3,103,838 - ECD_02956 0.45 -0.4
3,103,847 - ECD_02956 0.46 -0.2
3,103,847 - ECD_02956 0.46 -1.5
3,103,867 + ECD_02956 0.48 +0.1
3,103,911 + ECD_02956 0.52 +0.7
3,103,964 + ECD_02956 0.58 -1.1
3,103,964 + ECD_02956 0.58 -0.4
3,104,018 + ECD_02956 0.63 +0.4
3,104,217 + ECD_02956 0.83 -0.2
3,104,218 - ECD_02956 0.84 +0.2
3,104,218 - ECD_02956 0.84 +0.5
3,104,218 - ECD_02956 0.84 -0.3
3,104,218 - ECD_02956 0.84 +0.7
3,104,220 + ECD_02956 0.84 -0.8
3,104,220 + ECD_02956 0.84 -0.1
3,104,220 + ECD_02956 0.84 -0.9
3,104,220 + ECD_02956 0.84 -0.3
3,104,221 - ECD_02956 0.84 -0.5
3,104,221 - ECD_02956 0.84 +0.0
3,104,221 - ECD_02956 0.84 -0.5
3,104,223 + ECD_02956 0.84 -0.2
3,104,224 - ECD_02956 0.84 -0.5
3,104,224 - ECD_02956 0.84 -1.2
3,104,224 - ECD_02956 0.84 -1.4
3,104,365 - -0.4
3,104,370 - +0.1
3,104,407 - -0.4
3,104,410 + +0.3
3,104,411 - +0.7
3,104,411 - -0.9
3,104,443 + +0.7
3,104,452 - -0.3
3,104,493 + -0.3
3,104,493 + +0.6
3,104,541 + +0.0
3,104,552 - -0.3
3,104,552 - -0.5
3,104,552 - -1.1
3,104,552 - +0.0
3,104,567 + -0.9
3,104,567 + -0.3
3,104,568 - -2.5
3,104,568 - +0.2
3,104,568 - +0.4
3,104,596 + -1.3
3,104,596 + +0.3
3,104,596 + -1.8
3,104,596 + -0.6
3,104,596 + -0.7
3,104,596 + -0.6
3,104,603 - -1.5
3,104,650 + +0.1
3,104,650 + -0.9
3,104,650 + -2.1
3,104,650 + +1.6
3,104,650 + -2.2
3,104,650 + -0.0
3,104,651 - +0.0
3,104,651 - +0.1
3,104,651 - -0.2
3,104,661 + -1.0
3,104,661 + +0.3
3,104,661 + -1.6
3,104,662 - -0.6
3,104,688 - -0.1
3,104,688 - +0.4
3,104,718 + -0.4
3,104,826 + ECD_02957 0.17 -0.6
3,104,845 + ECD_02957 0.19 -0.6
3,104,845 + ECD_02957 0.19 -0.4
3,104,845 + ECD_02957 0.19 -0.6
3,104,846 - ECD_02957 0.19 -1.2
3,104,969 - ECD_02957 0.32 +0.0
3,104,990 + ECD_02957 0.34 -0.4
3,105,010 + ECD_02957 0.36 +0.5
3,105,011 - ECD_02957 0.36 +1.3
3,105,039 + ECD_02957 0.39 -1.7
3,105,095 - ECD_02957 0.45 +1.3
3,105,095 - ECD_02957 0.45 +1.4
3,105,096 + ECD_02957 0.45 -1.0
3,105,096 + ECD_02957 0.45 -0.2
3,105,096 + ECD_02957 0.45 +0.9
3,105,097 - ECD_02957 0.45 -0.3
3,105,097 - ECD_02957 0.45 +0.2
3,105,097 - ECD_02957 0.45 +0.6
3,105,246 + ECD_02957 0.60 -1.2
3,105,246 + ECD_02957 0.60 +0.8
3,105,247 - ECD_02957 0.61 -0.9
3,105,247 - ECD_02957 0.61 -0.5

Or see this region's nucleotide sequence