Experiment: Bas50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02631 and ECD_02632 are separated by 232 nucleotides ECD_02632 and ECD_02633 are separated by 20 nucleotides
ECD_02631: ECD_02631 - hybrid sensory histidine kinase, in two-component regulatory system with UvrY, at 2,747,646 to 2,750,402
_02631
ECD_02632: ECD_02632 - D-glucarate dehydratase 1, at 2,750,635 to 2,751,975
_02632
ECD_02633: ECD_02633 - glucarate dehydratase-related protein, substrate unknown, at 2,751,996 to 2,753,336
_02633
Position (kb)
2750
2751
2752 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2749.637 kb on + strand, within ECD_02631 at 2749.637 kb on + strand, within ECD_02631 at 2749.637 kb on + strand, within ECD_02631 at 2749.637 kb on + strand, within ECD_02631 at 2749.637 kb on + strand, within ECD_02631 at 2749.637 kb on + strand, within ECD_02631 at 2749.638 kb on - strand, within ECD_02631 at 2749.692 kb on - strand, within ECD_02631 at 2749.712 kb on + strand, within ECD_02631 at 2749.712 kb on + strand, within ECD_02631 at 2749.712 kb on + strand, within ECD_02631 at 2749.712 kb on + strand, within ECD_02631 at 2749.713 kb on - strand, within ECD_02631 at 2749.713 kb on - strand, within ECD_02631 at 2749.713 kb on - strand, within ECD_02631 at 2749.800 kb on - strand, within ECD_02631 at 2749.945 kb on - strand, within ECD_02631 at 2749.979 kb on + strand, within ECD_02631 at 2749.979 kb on + strand, within ECD_02631 at 2749.979 kb on + strand, within ECD_02631 at 2749.995 kb on + strand, within ECD_02631 at 2749.996 kb on - strand, within ECD_02631 at 2750.012 kb on + strand, within ECD_02631 at 2750.129 kb on + strand at 2750.129 kb on + strand at 2750.144 kb on - strand at 2750.228 kb on + strand at 2750.228 kb on + strand at 2750.252 kb on + strand at 2750.252 kb on + strand at 2750.267 kb on + strand at 2750.302 kb on + strand at 2750.302 kb on + strand at 2750.302 kb on + strand at 2750.302 kb on + strand at 2750.302 kb on + strand at 2750.307 kb on - strand at 2750.312 kb on + strand at 2750.313 kb on - strand at 2750.315 kb on + strand at 2750.316 kb on - strand at 2750.316 kb on - strand at 2750.419 kb on + strand at 2750.434 kb on + strand at 2750.545 kb on + strand at 2750.687 kb on + strand at 2750.687 kb on + strand at 2750.687 kb on + strand at 2750.688 kb on - strand at 2750.688 kb on - strand at 2750.688 kb on - strand at 2750.806 kb on + strand, within ECD_02632 at 2750.807 kb on - strand, within ECD_02632 at 2750.807 kb on - strand, within ECD_02632 at 2750.883 kb on + strand, within ECD_02632 at 2750.883 kb on + strand, within ECD_02632 at 2750.884 kb on - strand, within ECD_02632 at 2750.884 kb on - strand, within ECD_02632 at 2750.884 kb on - strand, within ECD_02632 at 2750.889 kb on + strand, within ECD_02632 at 2750.889 kb on + strand, within ECD_02632 at 2750.955 kb on + strand, within ECD_02632 at 2750.955 kb on + strand, within ECD_02632 at 2751.007 kb on + strand, within ECD_02632 at 2751.075 kb on + strand, within ECD_02632 at 2751.109 kb on - strand, within ECD_02632 at 2751.203 kb on + strand, within ECD_02632 at 2751.203 kb on + strand, within ECD_02632 at 2751.203 kb on + strand, within ECD_02632 at 2751.204 kb on - strand, within ECD_02632 at 2751.204 kb on - strand, within ECD_02632 at 2751.204 kb on - strand, within ECD_02632 at 2751.224 kb on + strand, within ECD_02632 at 2751.267 kb on + strand, within ECD_02632 at 2751.280 kb on - strand, within ECD_02632 at 2751.280 kb on - strand, within ECD_02632 at 2751.280 kb on - strand, within ECD_02632 at 2751.283 kb on - strand, within ECD_02632 at 2751.318 kb on + strand, within ECD_02632 at 2751.318 kb on + strand, within ECD_02632 at 2751.318 kb on + strand, within ECD_02632 at 2751.319 kb on - strand, within ECD_02632 at 2751.319 kb on - strand, within ECD_02632 at 2751.319 kb on - strand, within ECD_02632 at 2751.527 kb on + strand, within ECD_02632 at 2751.528 kb on - strand, within ECD_02632 at 2751.528 kb on - strand, within ECD_02632 at 2751.640 kb on + strand, within ECD_02632 at 2751.640 kb on + strand, within ECD_02632 at 2751.640 kb on + strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.655 kb on - strand, within ECD_02632 at 2751.655 kb on - strand, within ECD_02632 at 2751.659 kb on - strand, within ECD_02632 at 2751.659 kb on - strand, within ECD_02632 at 2751.659 kb on - strand, within ECD_02632 at 2751.659 kb on - strand, within ECD_02632 at 2751.659 kb on - strand, within ECD_02632 at 2751.708 kb on + strand, within ECD_02632 at 2751.737 kb on + strand, within ECD_02632 at 2751.738 kb on - strand, within ECD_02632 at 2751.760 kb on + strand, within ECD_02632 at 2751.861 kb on + strand at 2751.906 kb on + strand at 2751.907 kb on - strand at 2751.907 kb on - strand at 2751.907 kb on - strand at 2751.946 kb on - strand at 2751.961 kb on - strand at 2751.975 kb on + strand at 2751.975 kb on + strand at 2751.975 kb on + strand at 2751.975 kb on + strand at 2751.976 kb on - strand at 2751.976 kb on - strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.980 kb on - strand at 2751.980 kb on - strand at 2751.980 kb on - strand at 2752.051 kb on + strand at 2752.051 kb on + strand at 2752.051 kb on + strand at 2752.051 kb on + strand at 2752.051 kb on + strand at 2752.052 kb on - strand at 2752.052 kb on - strand at 2752.098 kb on - strand at 2752.098 kb on - strand at 2752.100 kb on - strand at 2752.100 kb on - strand at 2752.120 kb on - strand at 2752.120 kb on - strand at 2752.184 kb on + strand, within ECD_02633 at 2752.253 kb on + strand, within ECD_02633 at 2752.316 kb on + strand, within ECD_02633 at 2752.317 kb on - strand, within ECD_02633 at 2752.319 kb on + strand, within ECD_02633 at 2752.319 kb on + strand, within ECD_02633 at 2752.319 kb on + strand, within ECD_02633 at 2752.320 kb on - strand, within ECD_02633 at 2752.320 kb on - strand, within ECD_02633 at 2752.320 kb on - strand, within ECD_02633 at 2752.320 kb on - strand, within ECD_02633 at 2752.320 kb on - strand, within ECD_02633 at 2752.415 kb on + strand, within ECD_02633 at 2752.415 kb on + strand, within ECD_02633 at 2752.415 kb on + strand, within ECD_02633 at 2752.416 kb on - strand, within ECD_02633 at 2752.416 kb on - strand, within ECD_02633 at 2752.416 kb on - strand, within ECD_02633 at 2752.476 kb on - strand, within ECD_02633 at 2752.567 kb on + strand, within ECD_02633 at 2752.568 kb on - strand, within ECD_02633 at 2752.568 kb on - strand, within ECD_02633 at 2752.568 kb on - strand, within ECD_02633 at 2752.568 kb on - strand, within ECD_02633 at 2752.571 kb on + strand, within ECD_02633 at 2752.571 kb on + strand, within ECD_02633 at 2752.571 kb on + strand, within ECD_02633 at 2752.571 kb on + strand, within ECD_02633 at 2752.571 kb on + strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.643 kb on + strand, within ECD_02633 at 2752.644 kb on - strand, within ECD_02633 at 2752.721 kb on + strand, within ECD_02633 at 2752.745 kb on - strand, within ECD_02633 at 2752.838 kb on + strand, within ECD_02633 at 2752.849 kb on + strand, within ECD_02633 at 2752.849 kb on + strand, within ECD_02633 at 2752.849 kb on + strand, within ECD_02633 at 2752.849 kb on + strand, within ECD_02633 at 2752.849 kb on + strand, within ECD_02633 at 2752.850 kb on - strand, within ECD_02633 at 2752.850 kb on - strand, within ECD_02633 at 2752.850 kb on - strand, within ECD_02633 at 2752.850 kb on - strand, within ECD_02633 at 2752.880 kb on + strand, within ECD_02633 at 2752.882 kb on + strand, within ECD_02633 at 2752.882 kb on + strand, within ECD_02633 at 2752.882 kb on + strand, within ECD_02633 at 2752.882 kb on + strand, within ECD_02633 at 2752.883 kb on - strand, within ECD_02633 at 2752.891 kb on + strand, within ECD_02633 at 2752.892 kb on - strand, within ECD_02633 at 2752.905 kb on - strand, within ECD_02633 at 2752.905 kb on - strand, within ECD_02633 at 2752.907 kb on + strand, within ECD_02633 at 2752.907 kb on + strand, within ECD_02633 at 2752.907 kb on + strand, within ECD_02633 at 2752.908 kb on - strand, within ECD_02633 at 2752.908 kb on - strand, within ECD_02633 at 2752.933 kb on - strand, within ECD_02633 at 2752.964 kb on + strand, within ECD_02633 at 2752.965 kb on - strand, within ECD_02633 at 2752.968 kb on + strand, within ECD_02633 at 2752.969 kb on - strand, within ECD_02633 at 2752.969 kb on - strand, within ECD_02633
Per-strain Table
Position Strand Gene LocusTag Fraction Bas50 remove 2,749,637 + ECD_02631 0.72 -0.1 2,749,637 + ECD_02631 0.72 +0.2 2,749,637 + ECD_02631 0.72 -1.9 2,749,637 + ECD_02631 0.72 -0.8 2,749,637 + ECD_02631 0.72 +1.1 2,749,637 + ECD_02631 0.72 +1.0 2,749,638 - ECD_02631 0.72 -0.2 2,749,692 - ECD_02631 0.74 -0.4 2,749,712 + ECD_02631 0.75 -1.1 2,749,712 + ECD_02631 0.75 -0.3 2,749,712 + ECD_02631 0.75 +0.8 2,749,712 + ECD_02631 0.75 +0.5 2,749,713 - ECD_02631 0.75 +1.1 2,749,713 - ECD_02631 0.75 +1.0 2,749,713 - ECD_02631 0.75 -0.5 2,749,800 - ECD_02631 0.78 -0.1 2,749,945 - ECD_02631 0.83 +0.9 2,749,979 + ECD_02631 0.85 +2.2 2,749,979 + ECD_02631 0.85 -0.9 2,749,979 + ECD_02631 0.85 +0.4 2,749,995 + ECD_02631 0.85 -0.6 2,749,996 - ECD_02631 0.85 -0.2 2,750,012 + ECD_02631 0.86 +0.6 2,750,129 + +0.2 2,750,129 + +0.5 2,750,144 - +2.7 2,750,228 + -0.5 2,750,228 + +0.8 2,750,252 + +1.2 2,750,252 + +0.1 2,750,267 + +0.8 2,750,302 + -0.3 2,750,302 + +0.8 2,750,302 + +2.0 2,750,302 + -0.5 2,750,302 + -0.3 2,750,307 - -1.8 2,750,312 + -0.1 2,750,313 - +0.7 2,750,315 + +0.1 2,750,316 - -3.0 2,750,316 - +2.3 2,750,419 + +0.1 2,750,434 + +0.1 2,750,545 + -1.8 2,750,687 + +1.3 2,750,687 + +0.0 2,750,687 + -2.0 2,750,688 - -1.1 2,750,688 - +0.5 2,750,688 - +0.6 2,750,806 + ECD_02632 0.13 +0.3 2,750,807 - ECD_02632 0.13 -2.2 2,750,807 - ECD_02632 0.13 -0.2 2,750,883 + ECD_02632 0.18 -0.1 2,750,883 + ECD_02632 0.18 +0.3 2,750,884 - ECD_02632 0.19 -0.1 2,750,884 - ECD_02632 0.19 -0.0 2,750,884 - ECD_02632 0.19 +0.6 2,750,889 + ECD_02632 0.19 -1.9 2,750,889 + ECD_02632 0.19 -0.4 2,750,955 + ECD_02632 0.24 -0.3 2,750,955 + ECD_02632 0.24 -0.6 2,751,007 + ECD_02632 0.28 +1.1 2,751,075 + ECD_02632 0.33 -0.6 2,751,109 - ECD_02632 0.35 -0.6 2,751,203 + ECD_02632 0.42 +1.6 2,751,203 + ECD_02632 0.42 +2.3 2,751,203 + ECD_02632 0.42 -0.5 2,751,204 - ECD_02632 0.42 -0.2 2,751,204 - ECD_02632 0.42 +2.0 2,751,204 - ECD_02632 0.42 -0.4 2,751,224 + ECD_02632 0.44 +0.4 2,751,267 + ECD_02632 0.47 +0.4 2,751,280 - ECD_02632 0.48 +1.6 2,751,280 - ECD_02632 0.48 -1.1 2,751,280 - ECD_02632 0.48 -0.8 2,751,283 - ECD_02632 0.48 +0.5 2,751,318 + ECD_02632 0.51 -0.7 2,751,318 + ECD_02632 0.51 +0.1 2,751,318 + ECD_02632 0.51 +0.8 2,751,319 - ECD_02632 0.51 -1.2 2,751,319 - ECD_02632 0.51 -1.4 2,751,319 - ECD_02632 0.51 -0.3 2,751,527 + ECD_02632 0.67 -0.3 2,751,528 - ECD_02632 0.67 -1.7 2,751,528 - ECD_02632 0.67 -1.2 2,751,640 + ECD_02632 0.75 -1.9 2,751,640 + ECD_02632 0.75 -0.9 2,751,640 + ECD_02632 0.75 -0.3 2,751,641 - ECD_02632 0.75 -1.9 2,751,641 - ECD_02632 0.75 -3.1 2,751,641 - ECD_02632 0.75 +0.0 2,751,641 - ECD_02632 0.75 +1.8 2,751,641 - ECD_02632 0.75 +0.7 2,751,641 - ECD_02632 0.75 +0.4 2,751,641 - ECD_02632 0.75 +0.8 2,751,641 - ECD_02632 0.75 -0.6 2,751,641 - ECD_02632 0.75 -0.2 2,751,641 - ECD_02632 0.75 +0.8 2,751,641 - ECD_02632 0.75 -0.6 2,751,655 - ECD_02632 0.76 +0.4 2,751,655 - ECD_02632 0.76 -1.1 2,751,659 - ECD_02632 0.76 -0.0 2,751,659 - ECD_02632 0.76 -1.1 2,751,659 - ECD_02632 0.76 -0.8 2,751,659 - ECD_02632 0.76 -1.0 2,751,659 - ECD_02632 0.76 -1.8 2,751,708 + ECD_02632 0.80 -0.4 2,751,737 + ECD_02632 0.82 -0.6 2,751,738 - ECD_02632 0.82 -0.8 2,751,760 + ECD_02632 0.84 -0.1 2,751,861 + -0.9 2,751,906 + +0.8 2,751,907 - -0.0 2,751,907 - +0.8 2,751,907 - -0.4 2,751,946 - +0.3 2,751,961 - -0.1 2,751,975 + -0.0 2,751,975 + +0.1 2,751,975 + +1.1 2,751,975 + -0.6 2,751,976 - -0.2 2,751,976 - -0.4 2,751,979 + -0.2 2,751,979 + +0.1 2,751,979 + +0.9 2,751,979 + -0.5 2,751,979 + -1.6 2,751,979 + +1.1 2,751,979 + -1.4 2,751,979 + -1.0 2,751,979 + +0.9 2,751,979 + -0.8 2,751,980 - -1.0 2,751,980 - -2.1 2,751,980 - -0.5 2,752,051 + -0.0 2,752,051 + +0.7 2,752,051 + +0.7 2,752,051 + +0.5 2,752,051 + -0.7 2,752,052 - -0.2 2,752,052 - -1.2 2,752,098 - -0.1 2,752,098 - +0.6 2,752,100 - -1.5 2,752,100 - -0.6 2,752,120 - +1.2 2,752,120 - -0.3 2,752,184 + ECD_02633 0.14 +2.0 2,752,253 + ECD_02633 0.19 -0.0 2,752,316 + ECD_02633 0.24 +0.8 2,752,317 - ECD_02633 0.24 -1.6 2,752,319 + ECD_02633 0.24 -0.8 2,752,319 + ECD_02633 0.24 -0.2 2,752,319 + ECD_02633 0.24 -1.2 2,752,320 - ECD_02633 0.24 +0.7 2,752,320 - ECD_02633 0.24 -0.4 2,752,320 - ECD_02633 0.24 +0.2 2,752,320 - ECD_02633 0.24 +1.0 2,752,320 - ECD_02633 0.24 +0.7 2,752,415 + ECD_02633 0.31 -0.2 2,752,415 + ECD_02633 0.31 -1.8 2,752,415 + ECD_02633 0.31 +1.0 2,752,416 - ECD_02633 0.31 -0.1 2,752,416 - ECD_02633 0.31 -0.2 2,752,416 - ECD_02633 0.31 +0.6 2,752,476 - ECD_02633 0.36 -0.8 2,752,567 + ECD_02633 0.43 -0.2 2,752,568 - ECD_02633 0.43 -1.3 2,752,568 - ECD_02633 0.43 +0.2 2,752,568 - ECD_02633 0.43 -0.4 2,752,568 - ECD_02633 0.43 -0.4 2,752,571 + ECD_02633 0.43 +0.6 2,752,571 + ECD_02633 0.43 -1.8 2,752,571 + ECD_02633 0.43 -0.3 2,752,571 + ECD_02633 0.43 +0.9 2,752,571 + ECD_02633 0.43 +1.2 2,752,572 - ECD_02633 0.43 +0.2 2,752,572 - ECD_02633 0.43 -0.9 2,752,572 - ECD_02633 0.43 -0.0 2,752,572 - ECD_02633 0.43 +0.6 2,752,572 - ECD_02633 0.43 +0.0 2,752,572 - ECD_02633 0.43 -0.8 2,752,572 - ECD_02633 0.43 -0.6 2,752,572 - ECD_02633 0.43 -0.2 2,752,572 - ECD_02633 0.43 -1.9 2,752,643 + ECD_02633 0.48 -2.4 2,752,644 - ECD_02633 0.48 -0.2 2,752,721 + ECD_02633 0.54 +1.1 2,752,745 - ECD_02633 0.56 +0.7 2,752,838 + ECD_02633 0.63 +1.4 2,752,849 + ECD_02633 0.64 +0.4 2,752,849 + ECD_02633 0.64 -0.9 2,752,849 + ECD_02633 0.64 +1.1 2,752,849 + ECD_02633 0.64 -0.4 2,752,849 + ECD_02633 0.64 +0.3 2,752,850 - ECD_02633 0.64 -0.9 2,752,850 - ECD_02633 0.64 -1.1 2,752,850 - ECD_02633 0.64 -1.3 2,752,850 - ECD_02633 0.64 -1.0 2,752,880 + ECD_02633 0.66 -0.2 2,752,882 + ECD_02633 0.66 +0.3 2,752,882 + ECD_02633 0.66 -1.1 2,752,882 + ECD_02633 0.66 -1.4 2,752,882 + ECD_02633 0.66 -0.6 2,752,883 - ECD_02633 0.66 +0.4 2,752,891 + ECD_02633 0.67 +0.3 2,752,892 - ECD_02633 0.67 -1.8 2,752,905 - ECD_02633 0.68 -0.3 2,752,905 - ECD_02633 0.68 +0.7 2,752,907 + ECD_02633 0.68 +0.8 2,752,907 + ECD_02633 0.68 +0.7 2,752,907 + ECD_02633 0.68 +0.4 2,752,908 - ECD_02633 0.68 -1.0 2,752,908 - ECD_02633 0.68 +0.7 2,752,933 - ECD_02633 0.70 +0.0 2,752,964 + ECD_02633 0.72 +0.2 2,752,965 - ECD_02633 0.72 +0.8 2,752,968 + ECD_02633 0.72 -1.4 2,752,969 - ECD_02633 0.73 +0.1 2,752,969 - ECD_02633 0.73 +0.1
Or see this region's nucleotide sequence