Strain Fitness in Escherichia coli BL21 around ECD_02632

Experiment: Bas50

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02631 and ECD_02632 are separated by 232 nucleotidesECD_02632 and ECD_02633 are separated by 20 nucleotides ECD_02631: ECD_02631 - hybrid sensory histidine kinase, in two-component regulatory system with UvrY, at 2,747,646 to 2,750,402 _02631 ECD_02632: ECD_02632 - D-glucarate dehydratase 1, at 2,750,635 to 2,751,975 _02632 ECD_02633: ECD_02633 - glucarate dehydratase-related protein, substrate unknown, at 2,751,996 to 2,753,336 _02633 Position (kb) 2750 2751 2752Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2749.637 kb on + strand, within ECD_02631at 2749.637 kb on + strand, within ECD_02631at 2749.637 kb on + strand, within ECD_02631at 2749.637 kb on + strand, within ECD_02631at 2749.637 kb on + strand, within ECD_02631at 2749.637 kb on + strand, within ECD_02631at 2749.638 kb on - strand, within ECD_02631at 2749.692 kb on - strand, within ECD_02631at 2749.712 kb on + strand, within ECD_02631at 2749.712 kb on + strand, within ECD_02631at 2749.712 kb on + strand, within ECD_02631at 2749.712 kb on + strand, within ECD_02631at 2749.713 kb on - strand, within ECD_02631at 2749.713 kb on - strand, within ECD_02631at 2749.713 kb on - strand, within ECD_02631at 2749.800 kb on - strand, within ECD_02631at 2749.945 kb on - strand, within ECD_02631at 2749.979 kb on + strand, within ECD_02631at 2749.979 kb on + strand, within ECD_02631at 2749.979 kb on + strand, within ECD_02631at 2749.995 kb on + strand, within ECD_02631at 2749.996 kb on - strand, within ECD_02631at 2750.012 kb on + strand, within ECD_02631at 2750.129 kb on + strandat 2750.129 kb on + strandat 2750.144 kb on - strandat 2750.228 kb on + strandat 2750.228 kb on + strandat 2750.252 kb on + strandat 2750.252 kb on + strandat 2750.267 kb on + strandat 2750.302 kb on + strandat 2750.302 kb on + strandat 2750.302 kb on + strandat 2750.302 kb on + strandat 2750.302 kb on + strandat 2750.307 kb on - strandat 2750.312 kb on + strandat 2750.313 kb on - strandat 2750.315 kb on + strandat 2750.316 kb on - strandat 2750.316 kb on - strandat 2750.419 kb on + strandat 2750.434 kb on + strandat 2750.545 kb on + strandat 2750.687 kb on + strandat 2750.687 kb on + strandat 2750.687 kb on + strandat 2750.688 kb on - strandat 2750.688 kb on - strandat 2750.688 kb on - strandat 2750.806 kb on + strand, within ECD_02632at 2750.807 kb on - strand, within ECD_02632at 2750.807 kb on - strand, within ECD_02632at 2750.883 kb on + strand, within ECD_02632at 2750.883 kb on + strand, within ECD_02632at 2750.884 kb on - strand, within ECD_02632at 2750.884 kb on - strand, within ECD_02632at 2750.884 kb on - strand, within ECD_02632at 2750.889 kb on + strand, within ECD_02632at 2750.889 kb on + strand, within ECD_02632at 2750.955 kb on + strand, within ECD_02632at 2750.955 kb on + strand, within ECD_02632at 2751.007 kb on + strand, within ECD_02632at 2751.075 kb on + strand, within ECD_02632at 2751.109 kb on - strand, within ECD_02632at 2751.203 kb on + strand, within ECD_02632at 2751.203 kb on + strand, within ECD_02632at 2751.203 kb on + strand, within ECD_02632at 2751.204 kb on - strand, within ECD_02632at 2751.204 kb on - strand, within ECD_02632at 2751.204 kb on - strand, within ECD_02632at 2751.224 kb on + strand, within ECD_02632at 2751.267 kb on + strand, within ECD_02632at 2751.280 kb on - strand, within ECD_02632at 2751.280 kb on - strand, within ECD_02632at 2751.280 kb on - strand, within ECD_02632at 2751.283 kb on - strand, within ECD_02632at 2751.318 kb on + strand, within ECD_02632at 2751.318 kb on + strand, within ECD_02632at 2751.318 kb on + strand, within ECD_02632at 2751.319 kb on - strand, within ECD_02632at 2751.319 kb on - strand, within ECD_02632at 2751.319 kb on - strand, within ECD_02632at 2751.527 kb on + strand, within ECD_02632at 2751.528 kb on - strand, within ECD_02632at 2751.528 kb on - strand, within ECD_02632at 2751.640 kb on + strand, within ECD_02632at 2751.640 kb on + strand, within ECD_02632at 2751.640 kb on + strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.641 kb on - strand, within ECD_02632at 2751.655 kb on - strand, within ECD_02632at 2751.655 kb on - strand, within ECD_02632at 2751.659 kb on - strand, within ECD_02632at 2751.659 kb on - strand, within ECD_02632at 2751.659 kb on - strand, within ECD_02632at 2751.659 kb on - strand, within ECD_02632at 2751.659 kb on - strand, within ECD_02632at 2751.708 kb on + strand, within ECD_02632at 2751.737 kb on + strand, within ECD_02632at 2751.738 kb on - strand, within ECD_02632at 2751.760 kb on + strand, within ECD_02632at 2751.861 kb on + strandat 2751.906 kb on + strandat 2751.907 kb on - strandat 2751.907 kb on - strandat 2751.907 kb on - strandat 2751.946 kb on - strandat 2751.961 kb on - strandat 2751.975 kb on + strandat 2751.975 kb on + strandat 2751.975 kb on + strandat 2751.975 kb on + strandat 2751.976 kb on - strandat 2751.976 kb on - strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.979 kb on + strandat 2751.980 kb on - strandat 2751.980 kb on - strandat 2751.980 kb on - strandat 2752.051 kb on + strandat 2752.051 kb on + strandat 2752.051 kb on + strandat 2752.051 kb on + strandat 2752.051 kb on + strandat 2752.052 kb on - strandat 2752.052 kb on - strandat 2752.098 kb on - strandat 2752.098 kb on - strandat 2752.100 kb on - strandat 2752.100 kb on - strandat 2752.120 kb on - strandat 2752.120 kb on - strandat 2752.184 kb on + strand, within ECD_02633at 2752.253 kb on + strand, within ECD_02633at 2752.316 kb on + strand, within ECD_02633at 2752.317 kb on - strand, within ECD_02633at 2752.319 kb on + strand, within ECD_02633at 2752.319 kb on + strand, within ECD_02633at 2752.319 kb on + strand, within ECD_02633at 2752.320 kb on - strand, within ECD_02633at 2752.320 kb on - strand, within ECD_02633at 2752.320 kb on - strand, within ECD_02633at 2752.320 kb on - strand, within ECD_02633at 2752.320 kb on - strand, within ECD_02633at 2752.415 kb on + strand, within ECD_02633at 2752.415 kb on + strand, within ECD_02633at 2752.415 kb on + strand, within ECD_02633at 2752.416 kb on - strand, within ECD_02633at 2752.416 kb on - strand, within ECD_02633at 2752.416 kb on - strand, within ECD_02633at 2752.476 kb on - strand, within ECD_02633at 2752.567 kb on + strand, within ECD_02633at 2752.568 kb on - strand, within ECD_02633at 2752.568 kb on - strand, within ECD_02633at 2752.568 kb on - strand, within ECD_02633at 2752.568 kb on - strand, within ECD_02633at 2752.571 kb on + strand, within ECD_02633at 2752.571 kb on + strand, within ECD_02633at 2752.571 kb on + strand, within ECD_02633at 2752.571 kb on + strand, within ECD_02633at 2752.571 kb on + strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.572 kb on - strand, within ECD_02633at 2752.643 kb on + strand, within ECD_02633at 2752.644 kb on - strand, within ECD_02633at 2752.721 kb on + strand, within ECD_02633at 2752.745 kb on - strand, within ECD_02633at 2752.838 kb on + strand, within ECD_02633at 2752.849 kb on + strand, within ECD_02633at 2752.849 kb on + strand, within ECD_02633at 2752.849 kb on + strand, within ECD_02633at 2752.849 kb on + strand, within ECD_02633at 2752.849 kb on + strand, within ECD_02633at 2752.850 kb on - strand, within ECD_02633at 2752.850 kb on - strand, within ECD_02633at 2752.850 kb on - strand, within ECD_02633at 2752.850 kb on - strand, within ECD_02633at 2752.880 kb on + strand, within ECD_02633at 2752.882 kb on + strand, within ECD_02633at 2752.882 kb on + strand, within ECD_02633at 2752.882 kb on + strand, within ECD_02633at 2752.882 kb on + strand, within ECD_02633at 2752.883 kb on - strand, within ECD_02633at 2752.891 kb on + strand, within ECD_02633at 2752.892 kb on - strand, within ECD_02633at 2752.905 kb on - strand, within ECD_02633at 2752.905 kb on - strand, within ECD_02633at 2752.907 kb on + strand, within ECD_02633at 2752.907 kb on + strand, within ECD_02633at 2752.907 kb on + strand, within ECD_02633at 2752.908 kb on - strand, within ECD_02633at 2752.908 kb on - strand, within ECD_02633at 2752.933 kb on - strand, within ECD_02633at 2752.964 kb on + strand, within ECD_02633at 2752.965 kb on - strand, within ECD_02633at 2752.968 kb on + strand, within ECD_02633at 2752.969 kb on - strand, within ECD_02633at 2752.969 kb on - strand, within ECD_02633

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas50
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2,749,637 + ECD_02631 0.72 -0.1
2,749,637 + ECD_02631 0.72 +0.2
2,749,637 + ECD_02631 0.72 -1.9
2,749,637 + ECD_02631 0.72 -0.8
2,749,637 + ECD_02631 0.72 +1.1
2,749,637 + ECD_02631 0.72 +1.0
2,749,638 - ECD_02631 0.72 -0.2
2,749,692 - ECD_02631 0.74 -0.4
2,749,712 + ECD_02631 0.75 -1.1
2,749,712 + ECD_02631 0.75 -0.3
2,749,712 + ECD_02631 0.75 +0.8
2,749,712 + ECD_02631 0.75 +0.5
2,749,713 - ECD_02631 0.75 +1.1
2,749,713 - ECD_02631 0.75 +1.0
2,749,713 - ECD_02631 0.75 -0.5
2,749,800 - ECD_02631 0.78 -0.1
2,749,945 - ECD_02631 0.83 +0.9
2,749,979 + ECD_02631 0.85 +2.2
2,749,979 + ECD_02631 0.85 -0.9
2,749,979 + ECD_02631 0.85 +0.4
2,749,995 + ECD_02631 0.85 -0.6
2,749,996 - ECD_02631 0.85 -0.2
2,750,012 + ECD_02631 0.86 +0.6
2,750,129 + +0.2
2,750,129 + +0.5
2,750,144 - +2.7
2,750,228 + -0.5
2,750,228 + +0.8
2,750,252 + +1.2
2,750,252 + +0.1
2,750,267 + +0.8
2,750,302 + -0.3
2,750,302 + +0.8
2,750,302 + +2.0
2,750,302 + -0.5
2,750,302 + -0.3
2,750,307 - -1.8
2,750,312 + -0.1
2,750,313 - +0.7
2,750,315 + +0.1
2,750,316 - -3.0
2,750,316 - +2.3
2,750,419 + +0.1
2,750,434 + +0.1
2,750,545 + -1.8
2,750,687 + +1.3
2,750,687 + +0.0
2,750,687 + -2.0
2,750,688 - -1.1
2,750,688 - +0.5
2,750,688 - +0.6
2,750,806 + ECD_02632 0.13 +0.3
2,750,807 - ECD_02632 0.13 -2.2
2,750,807 - ECD_02632 0.13 -0.2
2,750,883 + ECD_02632 0.18 -0.1
2,750,883 + ECD_02632 0.18 +0.3
2,750,884 - ECD_02632 0.19 -0.1
2,750,884 - ECD_02632 0.19 -0.0
2,750,884 - ECD_02632 0.19 +0.6
2,750,889 + ECD_02632 0.19 -1.9
2,750,889 + ECD_02632 0.19 -0.4
2,750,955 + ECD_02632 0.24 -0.3
2,750,955 + ECD_02632 0.24 -0.6
2,751,007 + ECD_02632 0.28 +1.1
2,751,075 + ECD_02632 0.33 -0.6
2,751,109 - ECD_02632 0.35 -0.6
2,751,203 + ECD_02632 0.42 +1.6
2,751,203 + ECD_02632 0.42 +2.3
2,751,203 + ECD_02632 0.42 -0.5
2,751,204 - ECD_02632 0.42 -0.2
2,751,204 - ECD_02632 0.42 +2.0
2,751,204 - ECD_02632 0.42 -0.4
2,751,224 + ECD_02632 0.44 +0.4
2,751,267 + ECD_02632 0.47 +0.4
2,751,280 - ECD_02632 0.48 +1.6
2,751,280 - ECD_02632 0.48 -1.1
2,751,280 - ECD_02632 0.48 -0.8
2,751,283 - ECD_02632 0.48 +0.5
2,751,318 + ECD_02632 0.51 -0.7
2,751,318 + ECD_02632 0.51 +0.1
2,751,318 + ECD_02632 0.51 +0.8
2,751,319 - ECD_02632 0.51 -1.2
2,751,319 - ECD_02632 0.51 -1.4
2,751,319 - ECD_02632 0.51 -0.3
2,751,527 + ECD_02632 0.67 -0.3
2,751,528 - ECD_02632 0.67 -1.7
2,751,528 - ECD_02632 0.67 -1.2
2,751,640 + ECD_02632 0.75 -1.9
2,751,640 + ECD_02632 0.75 -0.9
2,751,640 + ECD_02632 0.75 -0.3
2,751,641 - ECD_02632 0.75 -1.9
2,751,641 - ECD_02632 0.75 -3.1
2,751,641 - ECD_02632 0.75 +0.0
2,751,641 - ECD_02632 0.75 +1.8
2,751,641 - ECD_02632 0.75 +0.7
2,751,641 - ECD_02632 0.75 +0.4
2,751,641 - ECD_02632 0.75 +0.8
2,751,641 - ECD_02632 0.75 -0.6
2,751,641 - ECD_02632 0.75 -0.2
2,751,641 - ECD_02632 0.75 +0.8
2,751,641 - ECD_02632 0.75 -0.6
2,751,655 - ECD_02632 0.76 +0.4
2,751,655 - ECD_02632 0.76 -1.1
2,751,659 - ECD_02632 0.76 -0.0
2,751,659 - ECD_02632 0.76 -1.1
2,751,659 - ECD_02632 0.76 -0.8
2,751,659 - ECD_02632 0.76 -1.0
2,751,659 - ECD_02632 0.76 -1.8
2,751,708 + ECD_02632 0.80 -0.4
2,751,737 + ECD_02632 0.82 -0.6
2,751,738 - ECD_02632 0.82 -0.8
2,751,760 + ECD_02632 0.84 -0.1
2,751,861 + -0.9
2,751,906 + +0.8
2,751,907 - -0.0
2,751,907 - +0.8
2,751,907 - -0.4
2,751,946 - +0.3
2,751,961 - -0.1
2,751,975 + -0.0
2,751,975 + +0.1
2,751,975 + +1.1
2,751,975 + -0.6
2,751,976 - -0.2
2,751,976 - -0.4
2,751,979 + -0.2
2,751,979 + +0.1
2,751,979 + +0.9
2,751,979 + -0.5
2,751,979 + -1.6
2,751,979 + +1.1
2,751,979 + -1.4
2,751,979 + -1.0
2,751,979 + +0.9
2,751,979 + -0.8
2,751,980 - -1.0
2,751,980 - -2.1
2,751,980 - -0.5
2,752,051 + -0.0
2,752,051 + +0.7
2,752,051 + +0.7
2,752,051 + +0.5
2,752,051 + -0.7
2,752,052 - -0.2
2,752,052 - -1.2
2,752,098 - -0.1
2,752,098 - +0.6
2,752,100 - -1.5
2,752,100 - -0.6
2,752,120 - +1.2
2,752,120 - -0.3
2,752,184 + ECD_02633 0.14 +2.0
2,752,253 + ECD_02633 0.19 -0.0
2,752,316 + ECD_02633 0.24 +0.8
2,752,317 - ECD_02633 0.24 -1.6
2,752,319 + ECD_02633 0.24 -0.8
2,752,319 + ECD_02633 0.24 -0.2
2,752,319 + ECD_02633 0.24 -1.2
2,752,320 - ECD_02633 0.24 +0.7
2,752,320 - ECD_02633 0.24 -0.4
2,752,320 - ECD_02633 0.24 +0.2
2,752,320 - ECD_02633 0.24 +1.0
2,752,320 - ECD_02633 0.24 +0.7
2,752,415 + ECD_02633 0.31 -0.2
2,752,415 + ECD_02633 0.31 -1.8
2,752,415 + ECD_02633 0.31 +1.0
2,752,416 - ECD_02633 0.31 -0.1
2,752,416 - ECD_02633 0.31 -0.2
2,752,416 - ECD_02633 0.31 +0.6
2,752,476 - ECD_02633 0.36 -0.8
2,752,567 + ECD_02633 0.43 -0.2
2,752,568 - ECD_02633 0.43 -1.3
2,752,568 - ECD_02633 0.43 +0.2
2,752,568 - ECD_02633 0.43 -0.4
2,752,568 - ECD_02633 0.43 -0.4
2,752,571 + ECD_02633 0.43 +0.6
2,752,571 + ECD_02633 0.43 -1.8
2,752,571 + ECD_02633 0.43 -0.3
2,752,571 + ECD_02633 0.43 +0.9
2,752,571 + ECD_02633 0.43 +1.2
2,752,572 - ECD_02633 0.43 +0.2
2,752,572 - ECD_02633 0.43 -0.9
2,752,572 - ECD_02633 0.43 -0.0
2,752,572 - ECD_02633 0.43 +0.6
2,752,572 - ECD_02633 0.43 +0.0
2,752,572 - ECD_02633 0.43 -0.8
2,752,572 - ECD_02633 0.43 -0.6
2,752,572 - ECD_02633 0.43 -0.2
2,752,572 - ECD_02633 0.43 -1.9
2,752,643 + ECD_02633 0.48 -2.4
2,752,644 - ECD_02633 0.48 -0.2
2,752,721 + ECD_02633 0.54 +1.1
2,752,745 - ECD_02633 0.56 +0.7
2,752,838 + ECD_02633 0.63 +1.4
2,752,849 + ECD_02633 0.64 +0.4
2,752,849 + ECD_02633 0.64 -0.9
2,752,849 + ECD_02633 0.64 +1.1
2,752,849 + ECD_02633 0.64 -0.4
2,752,849 + ECD_02633 0.64 +0.3
2,752,850 - ECD_02633 0.64 -0.9
2,752,850 - ECD_02633 0.64 -1.1
2,752,850 - ECD_02633 0.64 -1.3
2,752,850 - ECD_02633 0.64 -1.0
2,752,880 + ECD_02633 0.66 -0.2
2,752,882 + ECD_02633 0.66 +0.3
2,752,882 + ECD_02633 0.66 -1.1
2,752,882 + ECD_02633 0.66 -1.4
2,752,882 + ECD_02633 0.66 -0.6
2,752,883 - ECD_02633 0.66 +0.4
2,752,891 + ECD_02633 0.67 +0.3
2,752,892 - ECD_02633 0.67 -1.8
2,752,905 - ECD_02633 0.68 -0.3
2,752,905 - ECD_02633 0.68 +0.7
2,752,907 + ECD_02633 0.68 +0.8
2,752,907 + ECD_02633 0.68 +0.7
2,752,907 + ECD_02633 0.68 +0.4
2,752,908 - ECD_02633 0.68 -1.0
2,752,908 - ECD_02633 0.68 +0.7
2,752,933 - ECD_02633 0.70 +0.0
2,752,964 + ECD_02633 0.72 +0.2
2,752,965 - ECD_02633 0.72 +0.8
2,752,968 + ECD_02633 0.72 -1.4
2,752,969 - ECD_02633 0.73 +0.1
2,752,969 - ECD_02633 0.73 +0.1

Or see this region's nucleotide sequence