Strain Fitness in Escherichia coli BL21 around ECD_02414

Experiment: Bas50

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_04289 and ECD_04342 are separated by 360 nucleotidesECD_04342 and ECD_02414 are separated by 344 nucleotidesECD_02414 and ECD_02415 are separated by 141 nucleotides ECD_04289: ECD_04289 - transposase, at 2,518,421 to 2,519,260 _04289 ECD_04342: ECD_04342 - hypothetical protein, at 2,519,621 to 2,519,737 _04342 ECD_02414: ECD_02414 - rhodanase-like enzyme, sulfur transfer from thiosulfate, at 2,520,082 to 2,520,858 _02414 ECD_02415: ECD_02415 - aminopeptidase B, at 2,521,000 to 2,522,283 _02415 Position (kb) 2520 2521Strain fitness (log2 ratio) -2 -1 0 1 2at 2519.354 kb on - strandat 2519.522 kb on - strandat 2519.672 kb on - strand, within ECD_04342at 2519.672 kb on - strand, within ECD_04342at 2519.672 kb on - strand, within ECD_04342at 2519.680 kb on - strand, within ECD_04342at 2519.680 kb on - strand, within ECD_04342at 2519.683 kb on - strand, within ECD_04342at 2519.819 kb on - strandat 2519.988 kb on + strandat 2519.989 kb on - strandat 2520.711 kb on + strand, within ECD_02414at 2520.858 kb on + strandat 2520.859 kb on - strandat 2520.859 kb on - strandat 2520.997 kb on - strandat 2521.121 kb on + strandat 2521.537 kb on - strand, within ECD_02415at 2521.585 kb on - strand, within ECD_02415at 2521.701 kb on + strand, within ECD_02415at 2521.718 kb on + strand, within ECD_02415at 2521.719 kb on - strand, within ECD_02415at 2521.719 kb on - strand, within ECD_02415at 2521.812 kb on + strand, within ECD_02415at 2521.813 kb on - strand, within ECD_02415at 2521.814 kb on + strand, within ECD_02415at 2521.814 kb on + strand, within ECD_02415

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas50
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2,519,354 - -0.5
2,519,522 - -0.7
2,519,672 - ECD_04342 0.44 -0.1
2,519,672 - ECD_04342 0.44 -0.9
2,519,672 - ECD_04342 0.44 -0.4
2,519,680 - ECD_04342 0.50 -0.0
2,519,680 - ECD_04342 0.50 -0.2
2,519,683 - ECD_04342 0.53 -0.6
2,519,819 - -0.9
2,519,988 + -0.2
2,519,989 - +0.2
2,520,711 + ECD_02414 0.81 +1.8
2,520,858 + -0.7
2,520,859 - +0.5
2,520,859 - -1.8
2,520,997 - +0.5
2,521,121 + -0.6
2,521,537 - ECD_02415 0.42 +0.4
2,521,585 - ECD_02415 0.46 -0.3
2,521,701 + ECD_02415 0.55 -0.4
2,521,718 + ECD_02415 0.56 -0.3
2,521,719 - ECD_02415 0.56 +0.4
2,521,719 - ECD_02415 0.56 +1.7
2,521,812 + ECD_02415 0.63 +0.8
2,521,813 - ECD_02415 0.63 -0.2
2,521,814 + ECD_02415 0.63 -2.2
2,521,814 + ECD_02415 0.63 +1.6

Or see this region's nucleotide sequence