Strain Fitness in Escherichia coli BL21 around ECD_03465

Experiment: Bas32

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03463 and ECD_03464 are separated by 153 nucleotidesECD_03464 and ECD_03465 are separated by 52 nucleotidesECD_03465 and ECD_03466 are separated by 79 nucleotides ECD_03463: ECD_03463 - L-lactate dehydrogenase, FMN-linked, at 3,649,072 to 3,650,262 _03463 ECD_03464: ECD_03464 - tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent, at 3,650,416 to 3,650,889 _03464 ECD_03465: ECD_03465 - serine acetyltransferase, at 3,650,942 to 3,651,763 _03465 ECD_03466: ECD_03466 - glycerol-3-phosphate dehydrogenase (NAD+), at 3,651,843 to 3,652,862 _03466 Position (kb) 3650 3651 3652Strain fitness (log2 ratio) -2 -1 0 1at 3649.948 kb on - strand, within ECD_03463at 3649.948 kb on - strand, within ECD_03463at 3649.948 kb on - strand, within ECD_03463at 3649.971 kb on + strand, within ECD_03463at 3649.973 kb on + strand, within ECD_03463at 3649.974 kb on - strand, within ECD_03463at 3650.022 kb on + strand, within ECD_03463at 3650.048 kb on + strand, within ECD_03463at 3650.049 kb on - strand, within ECD_03463at 3650.071 kb on + strand, within ECD_03463at 3650.103 kb on - strand, within ECD_03463at 3650.114 kb on + strand, within ECD_03463at 3650.114 kb on + strand, within ECD_03463at 3650.415 kb on + strandat 3650.416 kb on - strandat 3650.420 kb on + strandat 3650.420 kb on + strandat 3650.421 kb on - strandat 3650.429 kb on + strandat 3650.430 kb on - strandat 3650.434 kb on + strandat 3650.686 kb on + strand, within ECD_03464at 3650.686 kb on + strand, within ECD_03464at 3650.702 kb on - strand, within ECD_03464at 3650.840 kb on - strand, within ECD_03464at 3650.887 kb on + strandat 3650.887 kb on + strandat 3650.887 kb on + strandat 3650.888 kb on - strandat 3650.888 kb on - strandat 3650.888 kb on - strandat 3650.891 kb on + strandat 3650.891 kb on + strandat 3650.891 kb on + strandat 3650.892 kb on - strandat 3650.896 kb on + strandat 3650.896 kb on + strandat 3650.896 kb on + strandat 3650.913 kb on + strandat 3650.913 kb on + strandat 3650.913 kb on + strandat 3650.913 kb on + strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.914 kb on - strandat 3650.943 kb on + strandat 3650.943 kb on + strandat 3650.943 kb on + strandat 3650.943 kb on + strandat 3650.943 kb on + strandat 3650.943 kb on + strandat 3650.943 kb on + strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.944 kb on - strandat 3650.968 kb on + strandat 3650.969 kb on - strandat 3650.969 kb on - strandat 3650.969 kb on - strandat 3650.975 kb on - strandat 3651.038 kb on - strand, within ECD_03465at 3651.785 kb on + strandat 3651.785 kb on + strandat 3651.786 kb on - strandat 3651.786 kb on - strandat 3651.825 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas32
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3,649,948 - ECD_03463 0.74 +0.3
3,649,948 - ECD_03463 0.74 -0.4
3,649,948 - ECD_03463 0.74 -0.5
3,649,971 + ECD_03463 0.75 -0.8
3,649,973 + ECD_03463 0.76 +1.0
3,649,974 - ECD_03463 0.76 -0.4
3,650,022 + ECD_03463 0.80 -0.7
3,650,048 + ECD_03463 0.82 +0.5
3,650,049 - ECD_03463 0.82 -0.9
3,650,071 + ECD_03463 0.84 +1.5
3,650,103 - ECD_03463 0.87 +0.1
3,650,114 + ECD_03463 0.87 -0.6
3,650,114 + ECD_03463 0.87 -1.2
3,650,415 + -0.0
3,650,416 - -0.5
3,650,420 + -0.4
3,650,420 + -0.7
3,650,421 - +0.4
3,650,429 + -0.7
3,650,430 - -0.7
3,650,434 + +1.0
3,650,686 + ECD_03464 0.57 -0.1
3,650,686 + ECD_03464 0.57 -0.4
3,650,702 - ECD_03464 0.60 +0.0
3,650,840 - ECD_03464 0.89 +0.1
3,650,887 + -0.5
3,650,887 + +0.8
3,650,887 + +0.4
3,650,888 - +0.7
3,650,888 - -0.1
3,650,888 - -0.3
3,650,891 + +0.4
3,650,891 + -0.6
3,650,891 + +0.8
3,650,892 - +0.0
3,650,896 + -0.2
3,650,896 + +0.3
3,650,896 + -0.3
3,650,913 + +0.5
3,650,913 + -0.0
3,650,913 + -0.3
3,650,913 + -0.8
3,650,914 - +0.1
3,650,914 - +0.4
3,650,914 - -0.2
3,650,914 - -0.0
3,650,914 - +0.5
3,650,914 - -0.0
3,650,914 - +0.6
3,650,914 - +0.4
3,650,943 + -0.4
3,650,943 + +0.1
3,650,943 + +0.1
3,650,943 + +0.7
3,650,943 + +1.1
3,650,943 + +0.2
3,650,943 + +0.6
3,650,944 - +0.3
3,650,944 - +0.0
3,650,944 - +0.8
3,650,944 - -0.0
3,650,944 - +0.8
3,650,944 - +0.5
3,650,944 - -1.0
3,650,944 - -0.8
3,650,968 + +0.7
3,650,969 - +0.3
3,650,969 - +1.5
3,650,969 - -0.0
3,650,975 - -0.6
3,651,038 - ECD_03465 0.12 -0.9
3,651,785 + +0.1
3,651,785 + -2.3
3,651,786 - +1.2
3,651,786 - +0.2
3,651,825 - +0.1

Or see this region's nucleotide sequence