Strain Fitness in Escherichia coli BL21 around ECD_02757

Experiment: Bas32

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02756 and ECD_02757 are separated by 214 nucleotidesECD_02757 and ECD_02758 are separated by 49 nucleotides ECD_02756: ECD_02756 - fructose-bisphosphate aldolase, class II, at 2,901,023 to 2,902,102 _02756 ECD_02757: ECD_02757 - phosphoglycerate kinase, at 2,902,317 to 2,903,480 _02757 ECD_02758: ECD_02758 - D-erythrose 4-phosphate dehydrogenase, at 2,903,530 to 2,904,549 _02758 Position (kb) 2902 2903 2904Strain fitness (log2 ratio) -2 -1 0 1at 2902.132 kb on - strandat 2902.132 kb on - strandat 2902.132 kb on - strandat 2902.132 kb on - strandat 2902.141 kb on - strandat 2902.360 kb on - strandat 2902.360 kb on - strandat 2902.360 kb on - strandat 2902.360 kb on - strandat 2902.360 kb on - strandat 2902.360 kb on - strandat 2902.365 kb on - strandat 2902.365 kb on - strandat 2903.548 kb on - strandat 2903.548 kb on - strandat 2903.554 kb on - strandat 2903.554 kb on - strandat 2903.554 kb on - strandat 2903.554 kb on - strandat 2903.554 kb on - strandat 2903.554 kb on - strandat 2903.554 kb on - strandat 2903.558 kb on - strandat 2903.558 kb on - strandat 2903.558 kb on - strandat 2903.558 kb on - strandat 2903.686 kb on - strand, within ECD_02758at 2903.718 kb on - strand, within ECD_02758at 2903.718 kb on - strand, within ECD_02758at 2903.726 kb on - strand, within ECD_02758at 2903.726 kb on - strand, within ECD_02758at 2903.726 kb on - strand, within ECD_02758at 2903.726 kb on - strand, within ECD_02758at 2903.728 kb on - strand, within ECD_02758at 2903.810 kb on - strand, within ECD_02758at 2903.830 kb on + strand, within ECD_02758at 2903.831 kb on - strand, within ECD_02758at 2903.831 kb on - strand, within ECD_02758at 2903.910 kb on + strand, within ECD_02758at 2903.911 kb on - strand, within ECD_02758at 2903.969 kb on + strand, within ECD_02758at 2903.970 kb on - strand, within ECD_02758at 2903.979 kb on + strand, within ECD_02758at 2904.034 kb on - strand, within ECD_02758at 2904.050 kb on - strand, within ECD_02758at 2904.070 kb on + strand, within ECD_02758at 2904.213 kb on + strand, within ECD_02758at 2904.214 kb on - strand, within ECD_02758at 2904.242 kb on + strand, within ECD_02758at 2904.242 kb on + strand, within ECD_02758at 2904.243 kb on - strand, within ECD_02758at 2904.243 kb on - strand, within ECD_02758at 2904.244 kb on + strand, within ECD_02758at 2904.244 kb on + strand, within ECD_02758at 2904.244 kb on + strand, within ECD_02758at 2904.245 kb on - strand, within ECD_02758at 2904.245 kb on - strand, within ECD_02758at 2904.245 kb on - strand, within ECD_02758at 2904.245 kb on - strand, within ECD_02758at 2904.265 kb on + strand, within ECD_02758at 2904.266 kb on - strand, within ECD_02758at 2904.266 kb on - strand, within ECD_02758at 2904.266 kb on - strand, within ECD_02758at 2904.266 kb on - strand, within ECD_02758at 2904.266 kb on - strand, within ECD_02758at 2904.320 kb on - strand, within ECD_02758at 2904.367 kb on + strand, within ECD_02758at 2904.368 kb on - strand, within ECD_02758at 2904.368 kb on - strand, within ECD_02758at 2904.401 kb on + strand, within ECD_02758at 2904.402 kb on - strand, within ECD_02758at 2904.402 kb on - strand, within ECD_02758at 2904.402 kb on - strand, within ECD_02758at 2904.402 kb on - strand, within ECD_02758at 2904.460 kb on - strandat 2904.460 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas32
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2,902,132 - -0.9
2,902,132 - +0.8
2,902,132 - -1.8
2,902,132 - -0.0
2,902,141 - +0.4
2,902,360 - -1.4
2,902,360 - -0.0
2,902,360 - +0.2
2,902,360 - -0.2
2,902,360 - -2.4
2,902,360 - -1.4
2,902,365 - +0.3
2,902,365 - +0.3
2,903,548 - +0.6
2,903,548 - -1.0
2,903,554 - +0.0
2,903,554 - -0.2
2,903,554 - -1.0
2,903,554 - -1.6
2,903,554 - -2.3
2,903,554 - -0.8
2,903,554 - +1.4
2,903,558 - +0.1
2,903,558 - +0.7
2,903,558 - -0.4
2,903,558 - -0.4
2,903,686 - ECD_02758 0.15 +0.3
2,903,718 - ECD_02758 0.18 +0.3
2,903,718 - ECD_02758 0.18 -0.1
2,903,726 - ECD_02758 0.19 -0.8
2,903,726 - ECD_02758 0.19 +0.9
2,903,726 - ECD_02758 0.19 +0.1
2,903,726 - ECD_02758 0.19 -0.6
2,903,728 - ECD_02758 0.19 +0.3
2,903,810 - ECD_02758 0.27 +0.3
2,903,830 + ECD_02758 0.29 -2.0
2,903,831 - ECD_02758 0.30 +0.3
2,903,831 - ECD_02758 0.30 -1.4
2,903,910 + ECD_02758 0.37 +0.5
2,903,911 - ECD_02758 0.37 +0.2
2,903,969 + ECD_02758 0.43 +0.7
2,903,970 - ECD_02758 0.43 -0.8
2,903,979 + ECD_02758 0.44 +0.1
2,904,034 - ECD_02758 0.49 -0.5
2,904,050 - ECD_02758 0.51 +0.7
2,904,070 + ECD_02758 0.53 -2.0
2,904,213 + ECD_02758 0.67 -0.6
2,904,214 - ECD_02758 0.67 -0.9
2,904,242 + ECD_02758 0.70 -0.3
2,904,242 + ECD_02758 0.70 +0.3
2,904,243 - ECD_02758 0.70 -0.5
2,904,243 - ECD_02758 0.70 -0.3
2,904,244 + ECD_02758 0.70 +0.7
2,904,244 + ECD_02758 0.70 +1.5
2,904,244 + ECD_02758 0.70 +1.7
2,904,245 - ECD_02758 0.70 -0.7
2,904,245 - ECD_02758 0.70 +0.4
2,904,245 - ECD_02758 0.70 -1.6
2,904,245 - ECD_02758 0.70 +0.6
2,904,265 + ECD_02758 0.72 -0.9
2,904,266 - ECD_02758 0.72 +0.3
2,904,266 - ECD_02758 0.72 -0.2
2,904,266 - ECD_02758 0.72 -0.6
2,904,266 - ECD_02758 0.72 +0.9
2,904,266 - ECD_02758 0.72 +1.1
2,904,320 - ECD_02758 0.77 +0.0
2,904,367 + ECD_02758 0.82 -0.4
2,904,368 - ECD_02758 0.82 +0.4
2,904,368 - ECD_02758 0.82 -0.5
2,904,401 + ECD_02758 0.85 -1.7
2,904,402 - ECD_02758 0.85 +0.2
2,904,402 - ECD_02758 0.85 -0.1
2,904,402 - ECD_02758 0.85 +0.0
2,904,402 - ECD_02758 0.85 -0.3
2,904,460 - -0.0
2,904,460 - +0.0

Or see this region's nucleotide sequence