Experiment: Bas32
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00912 and ECD_00913 are separated by 168 nucleotides ECD_00913 and ECD_00914 are separated by 172 nucleotides ECD_00914 and ECD_00915 are separated by 110 nucleotides
ECD_00912: ECD_00912 - 5-enolpyruvylshikimate-3-phosphate synthetase, at 963,902 to 965,185
_00912
ECD_00913: ECD_00913 - putative peptidase-related chaperone, at 965,354 to 966,118
_00913
ECD_00914: ECD_00914 - cytidylate kinase, at 966,291 to 966,974
_00914
ECD_00915: ECD_00915 - 30S ribosomal subunit protein S1, at 967,085 to 968,758
_00915
Position (kb) 965
966
967 Strain fitness (log2 ratio) -2
-1
0
1
2 at 964.459 kb on + strand, within ECD_00912 at 964.460 kb on - strand, within ECD_00912 at 964.471 kb on + strand, within ECD_00912 at 964.610 kb on + strand, within ECD_00912 at 964.611 kb on - strand, within ECD_00912 at 964.781 kb on - strand, within ECD_00912 at 964.904 kb on + strand, within ECD_00912 at 965.045 kb on + strand, within ECD_00912 at 965.045 kb on + strand, within ECD_00912 at 965.095 kb on + strand at 965.147 kb on + strand at 965.570 kb on + strand, within ECD_00913 at 965.614 kb on + strand, within ECD_00913 at 965.615 kb on - strand, within ECD_00913 at 965.637 kb on - strand, within ECD_00913 at 965.645 kb on + strand, within ECD_00913 at 965.645 kb on + strand, within ECD_00913 at 965.645 kb on + strand, within ECD_00913 at 965.646 kb on - strand, within ECD_00913 at 965.647 kb on + strand, within ECD_00913 at 965.648 kb on - strand, within ECD_00913 at 965.807 kb on + strand, within ECD_00913 at 966.241 kb on + strand at 966.267 kb on + strand at 966.267 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas32 remove 964,459 + ECD_00912 0.43 +1.3 964,460 - ECD_00912 0.43 +0.2 964,471 + ECD_00912 0.44 +0.0 964,610 + ECD_00912 0.55 +1.9 964,611 - ECD_00912 0.55 -0.0 964,781 - ECD_00912 0.68 -0.0 964,904 + ECD_00912 0.78 -0.5 965,045 + ECD_00912 0.89 +0.2 965,045 + ECD_00912 0.89 +1.0 965,095 + -0.0 965,147 + -0.5 965,570 + ECD_00913 0.28 +0.6 965,614 + ECD_00913 0.34 -0.6 965,615 - ECD_00913 0.34 -0.0 965,637 - ECD_00913 0.37 -0.3 965,645 + ECD_00913 0.38 +0.5 965,645 + ECD_00913 0.38 +0.9 965,645 + ECD_00913 0.38 -0.5 965,646 - ECD_00913 0.38 -0.8 965,647 + ECD_00913 0.38 -2.3 965,648 - ECD_00913 0.38 -1.1 965,807 + ECD_00913 0.59 -1.0 966,241 + -0.2 966,267 + +0.5 966,267 + -0.4
Or see this region's nucleotide sequence