Strain Fitness in Escherichia coli BL21 around ECD_00150

Experiment: Bas32

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00149 and ECD_00150 are separated by 50 nucleotidesECD_00150 and ECD_00151 overlap by 1 nucleotidesECD_00151 and ECD_00152 overlap by 4 nucleotides ECD_00149: ECD_00149 - ferrichrome outer membrane transporter, at 170,327 to 172,570 _00149 ECD_00150: ECD_00150 - iron(3+)-hydroxamate import ABC transporter ATPase, at 172,621 to 173,418 _00150 ECD_00151: ECD_00151 - iron(3+)-hydroxamate import ABC transporter periplasmic binding protein, at 173,418 to 174,308 _00151 ECD_00152: ECD_00152 - iron(3+)-hydroxamate import ABC transporter permease, at 174,305 to 176,287 _00152 Position (kb) 172 173 174Strain fitness (log2 ratio) -2 -1 0 1 2at 171.633 kb on - strand, within ECD_00149at 171.647 kb on - strand, within ECD_00149at 171.728 kb on + strand, within ECD_00149at 171.833 kb on - strand, within ECD_00149at 171.875 kb on + strand, within ECD_00149at 171.876 kb on - strand, within ECD_00149at 171.894 kb on + strand, within ECD_00149at 171.902 kb on + strand, within ECD_00149at 171.903 kb on - strand, within ECD_00149at 171.907 kb on + strand, within ECD_00149at 171.907 kb on + strand, within ECD_00149at 171.911 kb on + strand, within ECD_00149at 171.911 kb on + strand, within ECD_00149at 171.958 kb on + strand, within ECD_00149at 171.958 kb on + strand, within ECD_00149at 172.004 kb on + strand, within ECD_00149at 172.004 kb on + strand, within ECD_00149at 172.004 kb on + strand, within ECD_00149at 172.004 kb on + strand, within ECD_00149at 172.005 kb on - strand, within ECD_00149at 172.005 kb on - strand, within ECD_00149at 172.030 kb on - strand, within ECD_00149at 172.048 kb on + strand, within ECD_00149at 172.048 kb on + strand, within ECD_00149at 172.177 kb on - strand, within ECD_00149at 172.189 kb on + strand, within ECD_00149at 172.193 kb on + strand, within ECD_00149at 172.194 kb on - strand, within ECD_00149at 172.194 kb on - strand, within ECD_00149at 172.220 kb on - strand, within ECD_00149at 172.222 kb on + strand, within ECD_00149at 172.222 kb on + strand, within ECD_00149at 172.222 kb on + strand, within ECD_00149at 172.223 kb on - strand, within ECD_00149at 172.223 kb on - strand, within ECD_00149at 172.226 kb on + strand, within ECD_00149at 172.226 kb on + strand, within ECD_00149at 172.226 kb on + strand, within ECD_00149at 172.227 kb on - strand, within ECD_00149at 172.227 kb on - strand, within ECD_00149at 172.238 kb on - strand, within ECD_00149at 172.283 kb on + strand, within ECD_00149at 172.283 kb on + strand, within ECD_00149at 172.286 kb on - strand, within ECD_00149at 172.286 kb on - strand, within ECD_00149at 172.286 kb on - strand, within ECD_00149at 172.286 kb on - strand, within ECD_00149at 172.337 kb on + strand, within ECD_00149at 172.340 kb on - strand, within ECD_00149at 172.390 kb on + strandat 172.391 kb on - strandat 172.465 kb on + strandat 172.487 kb on + strandat 172.487 kb on + strandat 172.511 kb on + strandat 172.511 kb on + strandat 172.512 kb on - strandat 172.512 kb on - strandat 172.666 kb on - strandat 172.668 kb on + strandat 172.669 kb on - strandat 172.669 kb on - strandat 172.669 kb on - strandat 172.767 kb on + strand, within ECD_00150at 173.198 kb on + strand, within ECD_00150at 173.269 kb on + strand, within ECD_00150at 173.528 kb on + strand, within ECD_00151at 173.529 kb on - strand, within ECD_00151at 173.560 kb on + strand, within ECD_00151at 173.610 kb on + strand, within ECD_00151at 173.679 kb on - strand, within ECD_00151at 173.751 kb on - strand, within ECD_00151at 173.763 kb on - strand, within ECD_00151at 173.783 kb on + strand, within ECD_00151at 173.849 kb on - strand, within ECD_00151at 173.889 kb on + strand, within ECD_00151at 173.979 kb on - strand, within ECD_00151at 174.075 kb on - strand, within ECD_00151at 174.086 kb on + strand, within ECD_00151at 174.107 kb on + strand, within ECD_00151at 174.203 kb on + strand, within ECD_00151at 174.241 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas32
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171,633 - ECD_00149 0.58 -1.2
171,647 - ECD_00149 0.59 -0.8
171,728 + ECD_00149 0.62 +0.0
171,833 - ECD_00149 0.67 +0.1
171,875 + ECD_00149 0.69 -0.1
171,876 - ECD_00149 0.69 -1.0
171,894 + ECD_00149 0.70 -0.2
171,902 + ECD_00149 0.70 -0.0
171,903 - ECD_00149 0.70 +0.1
171,907 + ECD_00149 0.70 -1.6
171,907 + ECD_00149 0.70 +0.6
171,911 + ECD_00149 0.71 -0.0
171,911 + ECD_00149 0.71 +0.3
171,958 + ECD_00149 0.73 +0.3
171,958 + ECD_00149 0.73 -0.2
172,004 + ECD_00149 0.75 +0.3
172,004 + ECD_00149 0.75 -0.1
172,004 + ECD_00149 0.75 -0.4
172,004 + ECD_00149 0.75 -1.3
172,005 - ECD_00149 0.75 -0.3
172,005 - ECD_00149 0.75 -0.2
172,030 - ECD_00149 0.76 +0.4
172,048 + ECD_00149 0.77 -1.2
172,048 + ECD_00149 0.77 -1.1
172,177 - ECD_00149 0.82 +0.1
172,189 + ECD_00149 0.83 +0.5
172,193 + ECD_00149 0.83 +0.9
172,194 - ECD_00149 0.83 +0.4
172,194 - ECD_00149 0.83 -0.4
172,220 - ECD_00149 0.84 +1.5
172,222 + ECD_00149 0.84 +0.4
172,222 + ECD_00149 0.84 +0.3
172,222 + ECD_00149 0.84 -0.1
172,223 - ECD_00149 0.84 -0.3
172,223 - ECD_00149 0.84 +1.3
172,226 + ECD_00149 0.85 +0.2
172,226 + ECD_00149 0.85 +0.9
172,226 + ECD_00149 0.85 +0.2
172,227 - ECD_00149 0.85 -0.0
172,227 - ECD_00149 0.85 +0.3
172,238 - ECD_00149 0.85 -1.2
172,283 + ECD_00149 0.87 +0.1
172,283 + ECD_00149 0.87 +0.6
172,286 - ECD_00149 0.87 +0.3
172,286 - ECD_00149 0.87 +2.4
172,286 - ECD_00149 0.87 +0.4
172,286 - ECD_00149 0.87 +0.0
172,337 + ECD_00149 0.90 -0.3
172,340 - ECD_00149 0.90 +0.6
172,390 + +0.2
172,391 - -1.1
172,465 + -0.0
172,487 + +0.1
172,487 + -0.1
172,511 + -0.3
172,511 + +0.9
172,512 - -0.2
172,512 - -0.2
172,666 - -0.4
172,668 + -0.6
172,669 - -1.8
172,669 - -0.9
172,669 - -0.1
172,767 + ECD_00150 0.18 -1.0
173,198 + ECD_00150 0.72 -0.4
173,269 + ECD_00150 0.81 -0.4
173,528 + ECD_00151 0.12 -0.9
173,529 - ECD_00151 0.12 -0.8
173,560 + ECD_00151 0.16 -0.0
173,610 + ECD_00151 0.22 +0.2
173,679 - ECD_00151 0.29 +0.6
173,751 - ECD_00151 0.37 -0.7
173,763 - ECD_00151 0.39 -0.7
173,783 + ECD_00151 0.41 +2.6
173,849 - ECD_00151 0.48 +0.4
173,889 + ECD_00151 0.53 +0.8
173,979 - ECD_00151 0.63 -0.3
174,075 - ECD_00151 0.74 +0.7
174,086 + ECD_00151 0.75 -0.7
174,107 + ECD_00151 0.77 -1.0
174,203 + ECD_00151 0.88 -0.1
174,241 - -1.0

Or see this region's nucleotide sequence