Experiment: KB with Conessine 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4834 and Psyr_4835 are separated by 15 nucleotides Psyr_4835 and Psyr_4836 are separated by 11 nucleotides Psyr_4836 and Psyr_4837 are separated by 151 nucleotides
Psyr_4834: Psyr_4834 - histidine:proton symporter, AAT family, at 5,737,809 to 5,739,185
_4834
Psyr_4835: Psyr_4835 - imidazolonepropionase, at 5,739,201 to 5,740,406
_4835
Psyr_4836: Psyr_4836 - N-formylglutamate deformylase, at 5,740,418 to 5,741,218
_4836
Psyr_4837: Psyr_4837 - Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase, at 5,741,370 to 5,743,628
_4837
Position (kb) 5739
5740
5741 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 5738.553 kb on + strand, within Psyr_4834 at 5738.553 kb on + strand, within Psyr_4834 at 5738.554 kb on - strand, within Psyr_4834 at 5738.554 kb on - strand, within Psyr_4834 at 5738.554 kb on - strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.742 kb on + strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.743 kb on - strand, within Psyr_4834 at 5738.862 kb on + strand, within Psyr_4834 at 5738.862 kb on + strand, within Psyr_4834 at 5738.862 kb on + strand, within Psyr_4834 at 5738.862 kb on + strand, within Psyr_4834 at 5738.862 kb on + strand, within Psyr_4834 at 5738.863 kb on - strand, within Psyr_4834 at 5738.863 kb on - strand, within Psyr_4834 at 5739.075 kb on + strand at 5739.076 kb on - strand at 5739.076 kb on - strand at 5739.142 kb on - strand at 5739.252 kb on + strand at 5739.253 kb on - strand at 5739.405 kb on - strand, within Psyr_4835 at 5739.541 kb on - strand, within Psyr_4835 at 5739.750 kb on + strand, within Psyr_4835 at 5739.750 kb on + strand, within Psyr_4835 at 5739.751 kb on - strand, within Psyr_4835 at 5739.751 kb on - strand, within Psyr_4835 at 5739.751 kb on - strand, within Psyr_4835 at 5739.831 kb on + strand, within Psyr_4835 at 5739.831 kb on + strand, within Psyr_4835 at 5739.831 kb on + strand, within Psyr_4835 at 5739.955 kb on - strand, within Psyr_4835 at 5740.056 kb on + strand, within Psyr_4835 at 5740.056 kb on + strand, within Psyr_4835 at 5740.056 kb on + strand, within Psyr_4835 at 5740.344 kb on + strand at 5740.345 kb on - strand at 5740.569 kb on - strand, within Psyr_4836 at 5740.613 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.664 kb on + strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.665 kb on - strand, within Psyr_4836 at 5740.713 kb on + strand, within Psyr_4836 at 5740.714 kb on - strand, within Psyr_4836 at 5740.714 kb on - strand, within Psyr_4836 at 5740.763 kb on + strand, within Psyr_4836 at 5740.994 kb on + strand, within Psyr_4836 at 5740.995 kb on - strand, within Psyr_4836 at 5740.995 kb on - strand, within Psyr_4836 at 5740.995 kb on - strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.102 kb on + strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836 at 5741.103 kb on - strand, within Psyr_4836
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Conessine 10 mM remove 5,738,553 + Psyr_4834 0.54 +0.8 5,738,553 + Psyr_4834 0.54 -0.8 5,738,554 - Psyr_4834 0.54 -1.8 5,738,554 - Psyr_4834 0.54 +1.8 5,738,554 - Psyr_4834 0.54 +0.0 5,738,742 + Psyr_4834 0.68 -0.0 5,738,742 + Psyr_4834 0.68 -2.2 5,738,742 + Psyr_4834 0.68 +1.2 5,738,742 + Psyr_4834 0.68 -1.7 5,738,742 + Psyr_4834 0.68 -2.1 5,738,742 + Psyr_4834 0.68 +0.3 5,738,743 - Psyr_4834 0.68 +0.9 5,738,743 - Psyr_4834 0.68 -0.2 5,738,743 - Psyr_4834 0.68 -0.8 5,738,743 - Psyr_4834 0.68 +1.2 5,738,743 - Psyr_4834 0.68 +1.2 5,738,743 - Psyr_4834 0.68 +1.2 5,738,743 - Psyr_4834 0.68 +0.6 5,738,743 - Psyr_4834 0.68 -0.8 5,738,743 - Psyr_4834 0.68 -0.8 5,738,743 - Psyr_4834 0.68 -0.3 5,738,743 - Psyr_4834 0.68 -1.4 5,738,743 - Psyr_4834 0.68 -0.3 5,738,862 + Psyr_4834 0.76 -0.9 5,738,862 + Psyr_4834 0.76 -0.8 5,738,862 + Psyr_4834 0.76 -3.6 5,738,862 + Psyr_4834 0.76 +1.4 5,738,862 + Psyr_4834 0.76 -1.7 5,738,863 - Psyr_4834 0.77 -0.1 5,738,863 - Psyr_4834 0.77 +1.9 5,739,075 + -2.6 5,739,076 - -0.8 5,739,076 - -1.4 5,739,142 - -0.0 5,739,252 + +0.2 5,739,253 - +0.1 5,739,405 - Psyr_4835 0.17 -0.6 5,739,541 - Psyr_4835 0.28 -0.8 5,739,750 + Psyr_4835 0.46 -0.7 5,739,750 + Psyr_4835 0.46 -0.3 5,739,751 - Psyr_4835 0.46 -0.2 5,739,751 - Psyr_4835 0.46 +0.9 5,739,751 - Psyr_4835 0.46 -0.4 5,739,831 + Psyr_4835 0.52 -0.2 5,739,831 + Psyr_4835 0.52 +1.2 5,739,831 + Psyr_4835 0.52 -0.3 5,739,955 - Psyr_4835 0.63 -0.9 5,740,056 + Psyr_4835 0.71 -0.7 5,740,056 + Psyr_4835 0.71 -0.6 5,740,056 + Psyr_4835 0.71 +1.2 5,740,344 + -1.6 5,740,345 - +0.9 5,740,569 - Psyr_4836 0.19 -1.9 5,740,613 + Psyr_4836 0.24 +0.3 5,740,664 + Psyr_4836 0.31 -0.4 5,740,664 + Psyr_4836 0.31 +2.0 5,740,664 + Psyr_4836 0.31 -0.1 5,740,664 + Psyr_4836 0.31 +1.2 5,740,664 + Psyr_4836 0.31 +0.1 5,740,664 + Psyr_4836 0.31 +5.0 5,740,664 + Psyr_4836 0.31 +1.8 5,740,665 - Psyr_4836 0.31 -0.2 5,740,665 - Psyr_4836 0.31 -1.0 5,740,665 - Psyr_4836 0.31 +0.1 5,740,665 - Psyr_4836 0.31 -1.9 5,740,665 - Psyr_4836 0.31 -0.3 5,740,713 + Psyr_4836 0.37 +0.8 5,740,714 - Psyr_4836 0.37 +1.0 5,740,714 - Psyr_4836 0.37 -0.5 5,740,763 + Psyr_4836 0.43 -1.4 5,740,994 + Psyr_4836 0.72 -1.9 5,740,995 - Psyr_4836 0.72 -1.0 5,740,995 - Psyr_4836 0.72 +1.3 5,740,995 - Psyr_4836 0.72 +0.6 5,741,102 + Psyr_4836 0.85 +1.7 5,741,102 + Psyr_4836 0.85 -0.1 5,741,102 + Psyr_4836 0.85 -0.4 5,741,102 + Psyr_4836 0.85 +0.0 5,741,102 + Psyr_4836 0.85 -2.8 5,741,102 + Psyr_4836 0.85 +0.8 5,741,102 + Psyr_4836 0.85 +2.2 5,741,103 - Psyr_4836 0.86 +0.1 5,741,103 - Psyr_4836 0.86 +0.8 5,741,103 - Psyr_4836 0.86 -0.0 5,741,103 - Psyr_4836 0.86 +2.6 5,741,103 - Psyr_4836 0.86 +0.5 5,741,103 - Psyr_4836 0.86 -0.9
Or see this region's nucleotide sequence