Experiment: KB with Terpene 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4025 and Psyr_4026 are separated by 50 nucleotides Psyr_4026 and Psyr_4027 are separated by 28 nucleotides Psyr_4027 and Psyr_4028 are separated by 203 nucleotides
Psyr_4025: Psyr_4025 - ATPase, at 4,793,247 to 4,794,287
_4025
Psyr_4026: Psyr_4026 - Protein of unknown function DUF58, at 4,794,338 to 4,795,627
_4026
Psyr_4027: Psyr_4027 - conserved hypothetical protein, at 4,795,656 to 4,796,015
_4027
Psyr_4028: Psyr_4028 - lipoprotein, putative, at 4,796,219 to 4,796,614
_4028
Position (kb) 4794
4795
4796 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 4793.584 kb on - strand, within Psyr_4025 at 4793.799 kb on + strand, within Psyr_4025 at 4793.799 kb on + strand, within Psyr_4025 at 4793.800 kb on - strand, within Psyr_4025 at 4793.800 kb on - strand, within Psyr_4025 at 4793.800 kb on - strand, within Psyr_4025 at 4794.019 kb on - strand, within Psyr_4025 at 4794.019 kb on - strand, within Psyr_4025 at 4794.410 kb on + strand at 4794.992 kb on + strand, within Psyr_4026 at 4794.992 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.112 kb on + strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.113 kb on - strand, within Psyr_4026 at 4795.175 kb on + strand, within Psyr_4026 at 4795.176 kb on - strand, within Psyr_4026 at 4795.229 kb on + strand, within Psyr_4026 at 4795.229 kb on + strand, within Psyr_4026 at 4795.230 kb on - strand, within Psyr_4026 at 4795.230 kb on - strand, within Psyr_4026 at 4795.422 kb on + strand, within Psyr_4026 at 4795.422 kb on + strand, within Psyr_4026 at 4795.423 kb on - strand, within Psyr_4026 at 4795.457 kb on + strand, within Psyr_4026 at 4795.457 kb on + strand, within Psyr_4026 at 4795.458 kb on - strand, within Psyr_4026 at 4795.458 kb on - strand, within Psyr_4026 at 4795.458 kb on - strand, within Psyr_4026 at 4795.458 kb on - strand, within Psyr_4026 at 4795.476 kb on - strand, within Psyr_4026 at 4795.476 kb on - strand, within Psyr_4026 at 4795.595 kb on + strand at 4795.595 kb on + strand at 4795.596 kb on - strand at 4795.624 kb on - strand at 4795.672 kb on + strand at 4795.693 kb on + strand, within Psyr_4027 at 4795.693 kb on + strand, within Psyr_4027 at 4795.693 kb on + strand, within Psyr_4027 at 4795.693 kb on + strand, within Psyr_4027 at 4795.693 kb on + strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.694 kb on - strand, within Psyr_4027 at 4795.723 kb on + strand, within Psyr_4027 at 4795.723 kb on + strand, within Psyr_4027 at 4795.724 kb on - strand, within Psyr_4027 at 4795.762 kb on + strand, within Psyr_4027 at 4795.762 kb on + strand, within Psyr_4027 at 4795.762 kb on + strand, within Psyr_4027 at 4795.762 kb on + strand, within Psyr_4027 at 4795.763 kb on - strand, within Psyr_4027 at 4795.763 kb on - strand, within Psyr_4027 at 4795.895 kb on + strand, within Psyr_4027 at 4795.896 kb on - strand, within Psyr_4027 at 4795.972 kb on + strand, within Psyr_4027 at 4795.972 kb on + strand, within Psyr_4027 at 4796.009 kb on + strand at 4796.009 kb on + strand at 4796.010 kb on - strand at 4796.010 kb on - strand at 4796.010 kb on - strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.011 kb on + strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.012 kb on - strand at 4796.082 kb on + strand at 4796.160 kb on + strand at 4796.161 kb on - strand at 4796.161 kb on - strand at 4796.171 kb on + strand at 4796.172 kb on - strand at 4796.217 kb on - strand at 4796.220 kb on + strand at 4796.220 kb on + strand at 4796.220 kb on + strand at 4796.220 kb on + strand at 4796.220 kb on + strand at 4796.221 kb on - strand at 4796.249 kb on + strand at 4796.249 kb on + strand at 4796.249 kb on + strand at 4796.250 kb on - strand at 4796.335 kb on - strand, within Psyr_4028 at 4796.370 kb on + strand, within Psyr_4028 at 4796.391 kb on + strand, within Psyr_4028 at 4796.391 kb on + strand, within Psyr_4028 at 4796.588 kb on + strand at 4796.589 kb on - strand at 4796.591 kb on + strand at 4796.591 kb on + strand at 4796.591 kb on + strand at 4796.591 kb on + strand at 4796.592 kb on - strand at 4796.592 kb on - strand at 4796.592 kb on - strand at 4796.603 kb on + strand at 4796.608 kb on + strand at 4796.608 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Terpene 10 mM remove 4,793,584 - Psyr_4025 0.32 +0.5 4,793,799 + Psyr_4025 0.53 +0.6 4,793,799 + Psyr_4025 0.53 -1.5 4,793,800 - Psyr_4025 0.53 -0.9 4,793,800 - Psyr_4025 0.53 +0.3 4,793,800 - Psyr_4025 0.53 +0.7 4,794,019 - Psyr_4025 0.74 +0.3 4,794,019 - Psyr_4025 0.74 -1.5 4,794,410 + -1.0 4,794,992 + Psyr_4026 0.51 -0.3 4,794,992 + Psyr_4026 0.51 +0.3 4,795,112 + Psyr_4026 0.60 +0.1 4,795,112 + Psyr_4026 0.60 +1.1 4,795,112 + Psyr_4026 0.60 +0.9 4,795,112 + Psyr_4026 0.60 -0.0 4,795,112 + Psyr_4026 0.60 +4.9 4,795,112 + Psyr_4026 0.60 +1.1 4,795,112 + Psyr_4026 0.60 +1.6 4,795,112 + Psyr_4026 0.60 -0.1 4,795,113 - Psyr_4026 0.60 -0.8 4,795,113 - Psyr_4026 0.60 +0.8 4,795,113 - Psyr_4026 0.60 +0.5 4,795,113 - Psyr_4026 0.60 +0.8 4,795,113 - Psyr_4026 0.60 -0.9 4,795,175 + Psyr_4026 0.65 -0.2 4,795,176 - Psyr_4026 0.65 -1.9 4,795,229 + Psyr_4026 0.69 +2.0 4,795,229 + Psyr_4026 0.69 -1.5 4,795,230 - Psyr_4026 0.69 -0.2 4,795,230 - Psyr_4026 0.69 +2.0 4,795,422 + Psyr_4026 0.84 +0.1 4,795,422 + Psyr_4026 0.84 +0.0 4,795,423 - Psyr_4026 0.84 +0.4 4,795,457 + Psyr_4026 0.87 +0.0 4,795,457 + Psyr_4026 0.87 -1.5 4,795,458 - Psyr_4026 0.87 -0.1 4,795,458 - Psyr_4026 0.87 -0.6 4,795,458 - Psyr_4026 0.87 +1.1 4,795,458 - Psyr_4026 0.87 +1.9 4,795,476 - Psyr_4026 0.88 +0.1 4,795,476 - Psyr_4026 0.88 -1.7 4,795,595 + -0.5 4,795,595 + +0.4 4,795,596 - -0.5 4,795,624 - +1.0 4,795,672 + +0.5 4,795,693 + Psyr_4027 0.10 -0.8 4,795,693 + Psyr_4027 0.10 -0.1 4,795,693 + Psyr_4027 0.10 +1.3 4,795,693 + Psyr_4027 0.10 +0.7 4,795,693 + Psyr_4027 0.10 +0.3 4,795,694 - Psyr_4027 0.11 -0.1 4,795,694 - Psyr_4027 0.11 +0.0 4,795,694 - Psyr_4027 0.11 +0.5 4,795,694 - Psyr_4027 0.11 -0.1 4,795,694 - Psyr_4027 0.11 -0.3 4,795,694 - Psyr_4027 0.11 +1.4 4,795,694 - Psyr_4027 0.11 +0.5 4,795,694 - Psyr_4027 0.11 -1.3 4,795,723 + Psyr_4027 0.19 -0.6 4,795,723 + Psyr_4027 0.19 +0.3 4,795,724 - Psyr_4027 0.19 +0.9 4,795,762 + Psyr_4027 0.29 -0.5 4,795,762 + Psyr_4027 0.29 -0.7 4,795,762 + Psyr_4027 0.29 -1.5 4,795,762 + Psyr_4027 0.29 -0.9 4,795,763 - Psyr_4027 0.30 +0.5 4,795,763 - Psyr_4027 0.30 +0.5 4,795,895 + Psyr_4027 0.66 -0.1 4,795,896 - Psyr_4027 0.67 -0.9 4,795,972 + Psyr_4027 0.88 +0.9 4,795,972 + Psyr_4027 0.88 +0.3 4,796,009 + +0.0 4,796,009 + +0.9 4,796,010 - +2.1 4,796,010 - -0.3 4,796,010 - -1.2 4,796,011 + -2.4 4,796,011 + +0.8 4,796,011 + +0.1 4,796,011 + +1.1 4,796,011 + -1.5 4,796,011 + -0.9 4,796,011 + +0.5 4,796,011 + +0.1 4,796,011 + -0.7 4,796,011 + +0.8 4,796,011 + -1.5 4,796,012 - +1.0 4,796,012 - -0.5 4,796,012 - +0.9 4,796,012 - +0.4 4,796,012 - +1.1 4,796,012 - +0.8 4,796,012 - -0.1 4,796,012 - +4.6 4,796,012 - +0.1 4,796,012 - +0.5 4,796,012 - -1.4 4,796,012 - -0.3 4,796,012 - -0.8 4,796,012 - +0.8 4,796,012 - -0.5 4,796,012 - +0.8 4,796,012 - -0.9 4,796,012 - -0.6 4,796,082 + +0.8 4,796,160 + +0.7 4,796,161 - -2.0 4,796,161 - -1.5 4,796,171 + -0.6 4,796,172 - -0.3 4,796,217 - -0.2 4,796,220 + -1.7 4,796,220 + +0.9 4,796,220 + -1.0 4,796,220 + +0.5 4,796,220 + -0.8 4,796,221 - -0.5 4,796,249 + -1.2 4,796,249 + +0.4 4,796,249 + +2.5 4,796,250 - -0.3 4,796,335 - Psyr_4028 0.29 +0.8 4,796,370 + Psyr_4028 0.38 -0.4 4,796,391 + Psyr_4028 0.43 -0.9 4,796,391 + Psyr_4028 0.43 -0.8 4,796,588 + +0.2 4,796,589 - -1.1 4,796,591 + -0.2 4,796,591 + +0.2 4,796,591 + -2.4 4,796,591 + -0.6 4,796,592 - -2.1 4,796,592 - +0.6 4,796,592 - +1.7 4,796,603 + -0.3 4,796,608 + -0.7 4,796,608 + +0.5
Or see this region's nucleotide sequence