Experiment: KB with Piperine 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4130 and Psyr_4131 are separated by 904 nucleotides Psyr_4131 and Psyr_4132 are separated by 573 nucleotides
Psyr_4130: Psyr_4130 - Peptidase S1, chymotrypsin:PDZ/DHR/GLGF, at 4,919,176 to 4,920,336
_4130
Psyr_4131: Psyr_4131 - Transposase, IS111A/IS1328/IS1533:Transposase IS116/IS110/IS902, at 4,921,241 to 4,922,170
_4131
Psyr_4132: Psyr_4132 - histidinol phosphate aminotransferase apoenzyme, at 4,922,744 to 4,923,796
_4132
Position (kb) 4921
4922
4923 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 4920.360 kb on + strand at 4920.361 kb on - strand at 4920.361 kb on - strand at 4920.361 kb on - strand at 4920.455 kb on - strand at 4920.455 kb on - strand at 4920.455 kb on - strand at 4920.455 kb on - strand at 4920.457 kb on - strand at 4920.457 kb on - strand at 4920.457 kb on - strand at 4920.459 kb on - strand at 4920.459 kb on - strand at 4921.117 kb on + strand at 4921.117 kb on + strand at 4921.117 kb on + strand at 4921.117 kb on + strand at 4921.117 kb on + strand at 4921.117 kb on + strand at 4921.189 kb on + strand at 4921.189 kb on + strand at 4921.190 kb on - strand at 4921.190 kb on - strand at 4921.192 kb on - strand at 4921.388 kb on - strand, within Psyr_4131 at 4921.389 kb on + strand, within Psyr_4131 at 4921.389 kb on + strand, within Psyr_4131 at 4921.389 kb on + strand, within Psyr_4131 at 4921.390 kb on - strand, within Psyr_4131 at 4921.390 kb on - strand, within Psyr_4131 at 4921.390 kb on - strand, within Psyr_4131 at 4921.416 kb on + strand, within Psyr_4131 at 4921.416 kb on + strand, within Psyr_4131 at 4921.416 kb on + strand, within Psyr_4131 at 4921.416 kb on + strand, within Psyr_4131 at 4921.416 kb on + strand, within Psyr_4131 at 4921.416 kb on + strand, within Psyr_4131 at 4921.416 kb on + strand, within Psyr_4131 at 4921.417 kb on - strand, within Psyr_4131 at 4921.417 kb on - strand, within Psyr_4131 at 4921.417 kb on - strand, within Psyr_4131 at 4921.417 kb on - strand, within Psyr_4131 at 4921.417 kb on - strand, within Psyr_4131 at 4921.417 kb on - strand, within Psyr_4131 at 4921.417 kb on - strand, within Psyr_4131 at 4921.417 kb on - strand, within Psyr_4131 at 4921.417 kb on - strand, within Psyr_4131 at 4921.417 kb on - strand, within Psyr_4131 at 4921.449 kb on + strand, within Psyr_4131 at 4921.450 kb on - strand, within Psyr_4131 at 4921.450 kb on - strand, within Psyr_4131 at 4921.450 kb on - strand, within Psyr_4131 at 4921.450 kb on - strand, within Psyr_4131 at 4921.489 kb on + strand, within Psyr_4131 at 4921.491 kb on + strand, within Psyr_4131 at 4921.491 kb on + strand, within Psyr_4131 at 4921.491 kb on + strand, within Psyr_4131 at 4921.492 kb on - strand, within Psyr_4131 at 4921.492 kb on - strand, within Psyr_4131 at 4921.492 kb on - strand, within Psyr_4131 at 4921.492 kb on - strand, within Psyr_4131 at 4921.492 kb on - strand, within Psyr_4131 at 4921.661 kb on + strand, within Psyr_4131 at 4921.662 kb on - strand, within Psyr_4131 at 4921.662 kb on - strand, within Psyr_4131 at 4921.704 kb on + strand, within Psyr_4131 at 4921.704 kb on + strand, within Psyr_4131 at 4921.704 kb on + strand, within Psyr_4131 at 4921.704 kb on + strand, within Psyr_4131 at 4921.704 kb on + strand, within Psyr_4131 at 4921.705 kb on - strand, within Psyr_4131 at 4921.705 kb on - strand, within Psyr_4131 at 4921.705 kb on - strand, within Psyr_4131 at 4921.710 kb on + strand, within Psyr_4131 at 4921.711 kb on - strand, within Psyr_4131 at 4921.711 kb on - strand, within Psyr_4131 at 4921.711 kb on - strand, within Psyr_4131 at 4921.711 kb on - strand, within Psyr_4131 at 4921.711 kb on - strand, within Psyr_4131 at 4921.711 kb on - strand, within Psyr_4131 at 4921.945 kb on + strand, within Psyr_4131 at 4921.949 kb on - strand, within Psyr_4131 at 4921.949 kb on - strand, within Psyr_4131 at 4922.002 kb on - strand, within Psyr_4131 at 4922.002 kb on - strand, within Psyr_4131 at 4922.053 kb on - strand, within Psyr_4131 at 4922.083 kb on + strand at 4922.083 kb on + strand at 4922.084 kb on - strand at 4922.086 kb on + strand at 4922.086 kb on + strand at 4922.086 kb on + strand at 4922.086 kb on + strand at 4922.087 kb on - strand at 4922.087 kb on - strand at 4922.087 kb on - strand at 4922.087 kb on - strand at 4922.090 kb on + strand at 4922.090 kb on + strand at 4922.090 kb on + strand at 4922.091 kb on - strand at 4922.174 kb on + strand at 4922.174 kb on + strand at 4922.174 kb on + strand at 4922.174 kb on + strand at 4922.175 kb on - strand at 4922.175 kb on - strand at 4922.175 kb on - strand at 4922.311 kb on - strand at 4922.311 kb on - strand at 4922.360 kb on + strand at 4922.361 kb on - strand at 4922.402 kb on - strand at 4922.412 kb on - strand at 4922.412 kb on - strand at 4922.412 kb on - strand at 4922.414 kb on - strand at 4922.414 kb on - strand at 4922.414 kb on - strand at 4922.414 kb on - strand at 4922.414 kb on - strand at 4922.414 kb on - strand at 4922.414 kb on - strand at 4922.416 kb on - strand at 4922.416 kb on - strand at 4922.676 kb on + strand at 4922.676 kb on + strand at 4922.676 kb on + strand at 4922.677 kb on - strand at 4922.677 kb on - strand at 4922.680 kb on + strand at 4922.680 kb on + strand at 4922.680 kb on + strand at 4922.680 kb on + strand at 4922.680 kb on + strand at 4922.680 kb on + strand at 4922.680 kb on + strand at 4922.680 kb on + strand at 4922.680 kb on + strand at 4922.681 kb on - strand at 4922.681 kb on - strand at 4922.681 kb on - strand at 4922.681 kb on - strand at 4922.681 kb on - strand at 4922.681 kb on - strand at 4922.681 kb on - strand at 4922.681 kb on - strand at 4923.073 kb on - strand, within Psyr_4132
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Piperine 10 mM remove 4,920,360 + -0.3 4,920,361 - -1.4 4,920,361 - -1.6 4,920,361 - +1.5 4,920,455 - -0.1 4,920,455 - +0.2 4,920,455 - -0.1 4,920,455 - +2.7 4,920,457 - +0.8 4,920,457 - -0.6 4,920,457 - -0.2 4,920,459 - -1.0 4,920,459 - -0.3 4,921,117 + +0.5 4,921,117 + +0.4 4,921,117 + -1.6 4,921,117 + +0.3 4,921,117 + -0.2 4,921,117 + +1.5 4,921,189 + -1.5 4,921,189 + -0.8 4,921,190 - +1.6 4,921,190 - +2.2 4,921,192 - +0.2 4,921,388 - Psyr_4131 0.16 -1.8 4,921,389 + Psyr_4131 0.16 -1.5 4,921,389 + Psyr_4131 0.16 +0.4 4,921,389 + Psyr_4131 0.16 -1.0 4,921,390 - Psyr_4131 0.16 +0.6 4,921,390 - Psyr_4131 0.16 +1.1 4,921,390 - Psyr_4131 0.16 -0.2 4,921,416 + Psyr_4131 0.19 -1.7 4,921,416 + Psyr_4131 0.19 +0.7 4,921,416 + Psyr_4131 0.19 +0.3 4,921,416 + Psyr_4131 0.19 -0.4 4,921,416 + Psyr_4131 0.19 -1.0 4,921,416 + Psyr_4131 0.19 -2.0 4,921,416 + Psyr_4131 0.19 +0.5 4,921,417 - Psyr_4131 0.19 -2.1 4,921,417 - Psyr_4131 0.19 +2.6 4,921,417 - Psyr_4131 0.19 +0.5 4,921,417 - Psyr_4131 0.19 -1.0 4,921,417 - Psyr_4131 0.19 +2.7 4,921,417 - Psyr_4131 0.19 -1.0 4,921,417 - Psyr_4131 0.19 -0.0 4,921,417 - Psyr_4131 0.19 +0.7 4,921,417 - Psyr_4131 0.19 +2.0 4,921,417 - Psyr_4131 0.19 +0.2 4,921,449 + Psyr_4131 0.22 -0.1 4,921,450 - Psyr_4131 0.22 +0.1 4,921,450 - Psyr_4131 0.22 -1.0 4,921,450 - Psyr_4131 0.22 +0.7 4,921,450 - Psyr_4131 0.22 -0.8 4,921,489 + Psyr_4131 0.27 -0.2 4,921,491 + Psyr_4131 0.27 +1.0 4,921,491 + Psyr_4131 0.27 -0.7 4,921,491 + Psyr_4131 0.27 -0.2 4,921,492 - Psyr_4131 0.27 +0.8 4,921,492 - Psyr_4131 0.27 -0.9 4,921,492 - Psyr_4131 0.27 +1.2 4,921,492 - Psyr_4131 0.27 +0.1 4,921,492 - Psyr_4131 0.27 +0.9 4,921,661 + Psyr_4131 0.45 +0.6 4,921,662 - Psyr_4131 0.45 -0.6 4,921,662 - Psyr_4131 0.45 -0.4 4,921,704 + Psyr_4131 0.50 +2.5 4,921,704 + Psyr_4131 0.50 +0.2 4,921,704 + Psyr_4131 0.50 +2.0 4,921,704 + Psyr_4131 0.50 -0.6 4,921,704 + Psyr_4131 0.50 +0.1 4,921,705 - Psyr_4131 0.50 +1.0 4,921,705 - Psyr_4131 0.50 +1.6 4,921,705 - Psyr_4131 0.50 +0.3 4,921,710 + Psyr_4131 0.50 +2.0 4,921,711 - Psyr_4131 0.51 -0.3 4,921,711 - Psyr_4131 0.51 +2.0 4,921,711 - Psyr_4131 0.51 +0.8 4,921,711 - Psyr_4131 0.51 +0.5 4,921,711 - Psyr_4131 0.51 -0.0 4,921,711 - Psyr_4131 0.51 +0.5 4,921,945 + Psyr_4131 0.76 +0.1 4,921,949 - Psyr_4131 0.76 +0.2 4,921,949 - Psyr_4131 0.76 +0.4 4,922,002 - Psyr_4131 0.82 -1.6 4,922,002 - Psyr_4131 0.82 -1.0 4,922,053 - Psyr_4131 0.87 -0.4 4,922,083 + +1.5 4,922,083 + -0.1 4,922,084 - -0.6 4,922,086 + -1.4 4,922,086 + -1.1 4,922,086 + +0.2 4,922,086 + +0.4 4,922,087 - +0.0 4,922,087 - +1.5 4,922,087 - +0.2 4,922,087 - -0.5 4,922,090 + -0.3 4,922,090 + +0.1 4,922,090 + -0.3 4,922,091 - +0.4 4,922,174 + -1.4 4,922,174 + +0.1 4,922,174 + +0.5 4,922,174 + +0.5 4,922,175 - +1.0 4,922,175 - +1.6 4,922,175 - -0.1 4,922,311 - +1.0 4,922,311 - -0.2 4,922,360 + +2.6 4,922,361 - -0.3 4,922,402 - -1.0 4,922,412 - +1.5 4,922,412 - +1.0 4,922,412 - +1.5 4,922,414 - +1.8 4,922,414 - -0.6 4,922,414 - -1.5 4,922,414 - +0.7 4,922,414 - +1.2 4,922,414 - +0.2 4,922,414 - +1.0 4,922,416 - -0.4 4,922,416 - +1.9 4,922,676 + +0.6 4,922,676 + -0.4 4,922,676 + +4.4 4,922,677 - +0.1 4,922,677 - -0.2 4,922,680 + +0.8 4,922,680 + +0.6 4,922,680 + -3.7 4,922,680 + +0.2 4,922,680 + +0.4 4,922,680 + +0.4 4,922,680 + -0.2 4,922,680 + +0.5 4,922,680 + -0.0 4,922,681 - +0.4 4,922,681 - -1.4 4,922,681 - -0.7 4,922,681 - -2.8 4,922,681 - -0.7 4,922,681 - +3.6 4,922,681 - +2.0 4,922,681 - -0.8 4,923,073 - Psyr_4132 0.31 -0.8
Or see this region's nucleotide sequence