Experiment: Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yfhK and glmY are separated by 58 nucleotides glmY and purL are separated by 315 nucleotides
b2556: yfhK - putative 2-component sensor protein (VIMSS), at 2,687,693 to 2,689,120
yfhK
b4441: glmY - sRNA activator of glmS mRNA (RefSeq), at 2,689,179 to 2,689,362
glmY
b2557: purL - phosphoribosylformylglycinamidine synthase (NCBI), at 2,689,678 to 2,693,565
purL
Position (kb)
2689
2690 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 2688.321 kb on - strand, within yfhK at 2688.421 kb on + strand, within yfhK at 2688.467 kb on + strand, within yfhK at 2688.526 kb on + strand, within yfhK at 2688.526 kb on + strand, within yfhK at 2688.566 kb on + strand, within yfhK at 2688.652 kb on + strand, within yfhK at 2688.674 kb on - strand, within yfhK at 2688.707 kb on - strand, within yfhK at 2688.732 kb on - strand, within yfhK at 2688.874 kb on + strand, within yfhK at 2688.874 kb on + strand, within yfhK at 2688.908 kb on + strand, within yfhK at 2688.912 kb on + strand, within yfhK at 2688.914 kb on - strand, within yfhK at 2688.914 kb on - strand, within yfhK at 2688.969 kb on + strand, within yfhK at 2689.027 kb on + strand at 2689.030 kb on - strand at 2689.155 kb on - strand at 2689.169 kb on + strand at 2689.250 kb on + strand, within glmY at 2689.677 kb on - strand at 2689.716 kb on + strand at 2689.716 kb on + strand at 2689.716 kb on + strand at 2689.724 kb on - strand at 2689.838 kb on - strand at 2689.838 kb on - strand at 2689.891 kb on + strand at 2689.959 kb on + strand at 2690.045 kb on + strand at 2690.136 kb on + strand, within purL at 2690.136 kb on + strand, within purL at 2690.199 kb on - strand, within purL at 2690.199 kb on - strand, within purL at 2690.209 kb on + strand, within purL at 2690.294 kb on + strand, within purL at 2690.299 kb on + strand, within purL at 2690.308 kb on - strand, within purL at 2690.356 kb on - strand, within purL
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose (C) remove 2,688,321 - yfhK b2556 0.44 +0.1 2,688,421 + yfhK b2556 0.51 -0.3 2,688,467 + yfhK b2556 0.54 +0.0 2,688,526 + yfhK b2556 0.58 -0.6 2,688,526 + yfhK b2556 0.58 -0.2 2,688,566 + yfhK b2556 0.61 -0.1 2,688,652 + yfhK b2556 0.67 -0.3 2,688,674 - yfhK b2556 0.69 +0.7 2,688,707 - yfhK b2556 0.71 +0.1 2,688,732 - yfhK b2556 0.73 +0.3 2,688,874 + yfhK b2556 0.83 +0.3 2,688,874 + yfhK b2556 0.83 -1.1 2,688,908 + yfhK b2556 0.85 +0.1 2,688,912 + yfhK b2556 0.85 -0.8 2,688,914 - yfhK b2556 0.86 -2.9 2,688,914 - yfhK b2556 0.86 -0.8 2,688,969 + yfhK b2556 0.89 -0.2 2,689,027 + +0.2 2,689,030 - +0.0 2,689,155 - -0.2 2,689,169 + -0.5 2,689,250 + glmY b4441 0.39 +0.6 2,689,677 - -0.4 2,689,716 + -4.5 2,689,716 + -2.7 2,689,716 + -4.1 2,689,724 - -2.9 2,689,838 - -4.1 2,689,838 - -6.1 2,689,891 + -3.6 2,689,959 + -5.0 2,690,045 + -5.9 2,690,136 + purL b2557 0.12 -2.8 2,690,136 + purL b2557 0.12 -3.4 2,690,199 - purL b2557 0.13 -3.4 2,690,199 - purL b2557 0.13 -2.9 2,690,209 + purL b2557 0.14 -4.2 2,690,294 + purL b2557 0.16 -4.5 2,690,299 + purL b2557 0.16 -3.9 2,690,308 - purL b2557 0.16 -3.6 2,690,356 - purL b2557 0.17 -2.8
Or see this region's nucleotide sequence