Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2608

Experiment: KB with Hydrastine (1R, 9S) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Hydrastine (1R, 9S) 10 mM
3,061,716	+				-0.9
3,061,717	-				-0.3
3,061,866	+		Psyr_2607	0.27	+2.9
3,061,867	-		Psyr_2607	0.27	-0.8
3,061,872	+		Psyr_2607	0.28	+0.0
3,061,872	+		Psyr_2607	0.28	-0.3
3,061,873	-		Psyr_2607	0.28	-0.5
3,061,938	-		Psyr_2607	0.36	+1.6
3,061,983	+		Psyr_2607	0.41	-0.7
3,061,984	-		Psyr_2607	0.41	-0.2
3,062,277	-		Psyr_2607	0.77	-2.0
3,062,277	-		Psyr_2607	0.77	+0.1
3,062,336	+		Psyr_2607	0.84	+0.4
3,062,350	+		Psyr_2607	0.85	+0.8
3,062,350	+		Psyr_2607	0.85	-0.1
3,062,350	+		Psyr_2607	0.85	-1.1
3,062,351	-		Psyr_2607	0.86	-1.2
3,062,351	-		Psyr_2607	0.86	-1.9
3,062,357	+		Psyr_2607	0.86	-1.1
3,062,358	-		Psyr_2607	0.86	-2.3
3,062,358	-		Psyr_2607	0.86	-1.7
3,062,365	-		Psyr_2607	0.87	+1.4
3,062,425	-				-0.5
3,062,470	+				-0.3
3,062,470	+				+0.1
3,062,470	+				-0.0
3,062,471	-				-1.0
3,062,471	-				+4.4
3,062,471	-				-0.1
3,062,471	-				-1.4
3,062,471	-				-0.2
3,062,630	-				+1.1
3,062,696	+				+0.2
3,062,931	+				+0.8
3,062,931	+				-0.1
3,062,931	+				-0.2
3,062,931	+				+0.5
3,062,932	-				-0.2
3,062,954	+				-0.6
3,062,954	+				-0.3
3,062,954	+				-1.1
3,062,954	+				-0.6
3,062,954	+				-2.5
3,062,954	+				-1.4
3,062,954	+				-1.0
3,062,954	+				-0.2
3,062,955	-				+1.4
3,062,955	-				+1.8
3,062,955	-				+1.6
3,062,955	-				+1.4
3,062,955	-				+1.7
3,062,955	-				-0.5
3,063,004	+				+0.4
3,063,121	+				+0.3
3,063,122	-				+3.4
3,063,332	-				-0.2
3,063,425	+				+1.4
3,063,426	-				+0.2
3,063,470	+				+0.7
3,064,226	+				-0.1
3,064,226	+				-1.9
3,064,226	+				+1.8
3,064,227	-				+0.8
3,064,239	+				+0.9
3,064,240	-				+1.4
3,064,371	+				+0.4
3,064,375	+				-0.1
3,064,375	+				+1.9
3,064,529	+				+0.6
3,064,529	+				+2.2
3,064,529	+				+0.0
3,064,530	-				+1.6
3,064,673	+				-1.3
3,064,673	+				-0.4
3,064,673	+				-0.1
3,064,673	+				-1.7
3,064,673	+				+0.0
3,064,673	+				-1.0
3,065,395	+				-2.3
3,065,395	+				+0.6
3,065,396	-				-2.4
3,065,396	-				+1.0
3,065,583	-		Psyr_2608	0.10	+0.1
3,065,583	-		Psyr_2608	0.10	+0.9
3,065,648	+		Psyr_2608	0.10	+0.1
3,065,649	-		Psyr_2608	0.10	+1.1
3,065,649	-		Psyr_2608	0.10	+0.6
3,065,649	-		Psyr_2608	0.10	+1.4
3,065,807	+		Psyr_2608	0.11	-0.3
3,065,807	+		Psyr_2608	0.11	-1.0
3,065,808	-		Psyr_2608	0.11	-0.8
3,065,808	-		Psyr_2608	0.11	+0.7
3,066,113	+		Psyr_2608	0.12	+0.1
3,066,114	-		Psyr_2608	0.12	-0.3
3,066,123	-		Psyr_2608	0.12	+0.1
3,066,764	+		Psyr_2608	0.14	-1.4
3,066,765	-		Psyr_2608	0.14	+0.0
3,067,174	+		Psyr_2608	0.16	-0.6
3,067,174	+		Psyr_2608	0.16	+0.1
3,067,174	+		Psyr_2608	0.16	-0.7
3,067,174	+		Psyr_2608	0.16	+0.1
3,067,174	+		Psyr_2608	0.16	-0.3
3,067,174	+		Psyr_2608	0.16	+0.6
3,067,175	-		Psyr_2608	0.16	+0.2
3,067,175	-		Psyr_2608	0.16	+0.4
3,067,175	-		Psyr_2608	0.16	-0.8
3,067,492	-		Psyr_2608	0.17	+0.9
3,067,507	-		Psyr_2608	0.17	-1.4
3,067,805	+		Psyr_2608	0.18	-0.4
3,067,806	-		Psyr_2608	0.18	-0.3
3,067,806	-		Psyr_2608	0.18	-1.0
3,068,000	+		Psyr_2608	0.19	+0.5
3,068,000	+		Psyr_2608	0.19	+1.4
3,068,000	+		Psyr_2608	0.19	-0.2
3,068,000	+		Psyr_2608	0.19	-1.5
3,068,000	+		Psyr_2608	0.19	-0.7
3,068,001	-		Psyr_2608	0.19	-0.1
3,068,001	-		Psyr_2608	0.19	-0.1
3,068,007	+		Psyr_2608	0.19	-0.2
3,068,008	-		Psyr_2608	0.19	+1.2
3,068,009	+		Psyr_2608	0.19	-2.1
3,068,009	+		Psyr_2608	0.19	+0.4
3,068,009	+		Psyr_2608	0.19	+0.2
3,068,009	+		Psyr_2608	0.19	+0.7
3,068,009	+		Psyr_2608	0.19	+2.4
3,068,054	+		Psyr_2608	0.19	+1.1
3,068,054	+		Psyr_2608	0.19	-0.1
3,068,055	-		Psyr_2608	0.19	+3.7
3,068,055	-		Psyr_2608	0.19	-0.3
3,068,055	-		Psyr_2608	0.19	+1.4
3,068,055	-		Psyr_2608	0.19	-0.2
3,068,059	-		Psyr_2608	0.19	+1.4
3,068,352	-		Psyr_2608	0.20	-0.2
3,068,352	-		Psyr_2608	0.20	-0.8
3,068,397	+		Psyr_2608	0.20	+3.7
3,069,072	-		Psyr_2608	0.22	-1.0
3,069,120	-		Psyr_2608	0.23	-0.4
3,069,224	+		Psyr_2608	0.23	-0.3
3,069,225	-		Psyr_2608	0.23	-0.2
3,069,356	+		Psyr_2608	0.23	-1.0
3,069,356	+		Psyr_2608	0.23	+0.9
3,069,356	+		Psyr_2608	0.23	-0.6
3,069,356	+		Psyr_2608	0.23	-1.2
3,069,356	+		Psyr_2608	0.23	-1.5
3,069,356	+		Psyr_2608	0.23	+1.6
3,069,389	+		Psyr_2608	0.23	-0.2
3,069,389	+		Psyr_2608	0.23	+1.4
3,069,590	+		Psyr_2608	0.24	-0.1
3,069,591	-		Psyr_2608	0.24	-1.0
3,069,591	-		Psyr_2608	0.24	+1.7
3,069,830	+		Psyr_2608	0.25	+2.3
3,069,830	+		Psyr_2608	0.25	+0.5
3,069,831	-		Psyr_2608	0.25	-1.3
3,070,037	+		Psyr_2608	0.26	+1.4
3,070,059	-		Psyr_2608	0.26	-0.8
3,070,162	+		Psyr_2608	0.26	-2.0
3,070,855	+		Psyr_2608	0.29	+0.0
3,070,855	+		Psyr_2608	0.29	+0.0
3,070,935	+		Psyr_2608	0.29	+0.1
3,071,641	+		Psyr_2608	0.31	+1.7
3,071,642	-		Psyr_2608	0.31	+0.8
3,071,949	-		Psyr_2608	0.32	+2.2
3,071,949	-		Psyr_2608	0.32	-1.9
3,071,949	-		Psyr_2608	0.32	-0.6
3,072,041	-		Psyr_2608	0.33	+0.1
3,072,063	-		Psyr_2608	0.33	-1.6
3,072,063	-		Psyr_2608	0.33	+1.7
3,072,063	-		Psyr_2608	0.33	-0.2
3,072,137	+		Psyr_2608	0.33	+0.0
3,072,137	+		Psyr_2608	0.33	+0.8
3,072,137	+		Psyr_2608	0.33	+3.4
3,072,138	-		Psyr_2608	0.33	+1.4
3,072,138	-		Psyr_2608	0.33	+1.4
3,072,140	+		Psyr_2608	0.33	-0.1
3,072,141	-		Psyr_2608	0.33	+0.1
3,072,141	-		Psyr_2608	0.33	+0.9
3,072,443	+		Psyr_2608	0.34	-0.1
3,072,443	+		Psyr_2608	0.34	+3.4
3,072,443	+		Psyr_2608	0.34	+0.7
3,072,443	+		Psyr_2608	0.34	-0.9
3,072,443	+		Psyr_2608	0.34	-0.5
3,072,443	+		Psyr_2608	0.34	-0.6
3,072,444	-		Psyr_2608	0.34	+0.8
3,072,444	-		Psyr_2608	0.34	+1.5
3,072,444	-		Psyr_2608	0.34	-2.3
3,072,444	-		Psyr_2608	0.34	-0.9
3,072,444	-		Psyr_2608	0.34	-1.4
3,072,444	-		Psyr_2608	0.34	-0.3
3,072,444	-		Psyr_2608	0.34	-0.9
3,072,444	-		Psyr_2608	0.34	+0.8
3,072,444	-		Psyr_2608	0.34	-0.1
3,072,554	-		Psyr_2608	0.35	-0.8
3,072,554	-		Psyr_2608	0.35	+2.1
3,072,554	-		Psyr_2608	0.35	+0.5
3,072,694	-		Psyr_2608	0.35	+0.4
3,072,731	+		Psyr_2608	0.35	+1.3
3,073,022	+		Psyr_2608	0.36	-0.2
3,073,023	-		Psyr_2608	0.36	+2.4
3,073,023	-		Psyr_2608	0.36	-0.1
3,073,023	-		Psyr_2608	0.36	+0.1
3,073,023	-		Psyr_2608	0.36	-1.6
3,073,379	+		Psyr_2608	0.37	-2.4
3,073,379	+		Psyr_2608	0.37	-1.0
3,073,379	+		Psyr_2608	0.37	-0.9
3,073,379	+		Psyr_2608	0.37	-1.2
3,073,476	-		Psyr_2608	0.38	-0.1
3,073,476	-		Psyr_2608	0.38	-0.4
3,074,007	+		Psyr_2608	0.40	+0.3
3,074,327	+		Psyr_2608	0.41	+2.0
3,074,328	-		Psyr_2608	0.41	+0.2
3,074,381	+		Psyr_2608	0.41	-0.9
3,074,632	-		Psyr_2608	0.42	-0.4
3,074,632	-		Psyr_2608	0.42	+0.1
3,074,772	-		Psyr_2608	0.42	-0.6
3,075,231	-		Psyr_2608	0.44	-0.4
3,075,617	+		Psyr_2608	0.45	+1.9
3,075,617	+		Psyr_2608	0.45	+0.4
3,075,617	+		Psyr_2608	0.45	-3.7
3,075,780	-		Psyr_2608	0.46	-0.8
3,076,177	+		Psyr_2608	0.47	-2.2
3,076,211	+		Psyr_2608	0.47	-0.8
3,076,211	+		Psyr_2608	0.47	+1.2
3,076,212	-		Psyr_2608	0.47	-0.8
3,076,212	-		Psyr_2608	0.47	+0.5
3,076,374	+		Psyr_2608	0.48	+0.9
3,076,392	-		Psyr_2608	0.48	+0.6
3,076,392	-		Psyr_2608	0.48	-0.0
3,076,433	+		Psyr_2608	0.48	-0.7
3,076,433	+		Psyr_2608	0.48	-0.6
3,076,433	+		Psyr_2608	0.48	-0.2
3,076,799	+		Psyr_2608	0.49	-0.6
3,077,384	+		Psyr_2608	0.52	-1.9
3,077,384	+		Psyr_2608	0.52	+0.6
3,077,529	-		Psyr_2608	0.52	-0.4
3,077,659	+		Psyr_2608	0.53	-0.6
3,077,659	+		Psyr_2608	0.53	+0.4
3,077,680	-		Psyr_2608	0.53	-0.6
3,077,966	-		Psyr_2608	0.54	-2.0
3,077,972	+		Psyr_2608	0.54	-1.1
3,078,432	-		Psyr_2608	0.55	+0.8
3,078,432	-		Psyr_2608	0.55	+0.0
3,078,432	-		Psyr_2608	0.55	-0.5
3,078,432	-		Psyr_2608	0.55	-0.1
3,078,507	-		Psyr_2608	0.55	+0.0
3,078,507	-		Psyr_2608	0.55	+0.3
3,078,680	+		Psyr_2608	0.56	-1.2
3,079,138	-		Psyr_2608	0.58	-0.2
3,079,596	-		Psyr_2608	0.59	+1.1
3,079,596	-		Psyr_2608	0.59	+1.7
3,079,784	+		Psyr_2608	0.60	-1.2
3,079,784	+		Psyr_2608	0.60	-0.6
3,080,056	+		Psyr_2608	0.61	-2.4
3,080,108	+		Psyr_2608	0.61	-0.2
3,080,226	+		Psyr_2608	0.62	+0.5
3,080,272	+		Psyr_2608	0.62	+3.2
3,080,526	+		Psyr_2608	0.63	+2.4
3,080,526	+		Psyr_2608	0.63	-0.6
3,081,198	-		Psyr_2608	0.65	+3.8
3,081,364	-		Psyr_2608	0.66	-1.0
3,081,388	-		Psyr_2608	0.66	-0.8
3,081,400	+		Psyr_2608	0.66	+2.4
3,081,692	+		Psyr_2608	0.67	-1.2
3,081,739	-		Psyr_2608	0.67	+1.5
3,081,767	+		Psyr_2608	0.67	+2.9
3,082,398	+		Psyr_2608	0.69	+0.1
3,082,398	+		Psyr_2608	0.69	+0.5
3,082,399	-		Psyr_2608	0.69	-0.6
3,082,399	-		Psyr_2608	0.69	+0.4
3,082,399	-		Psyr_2608	0.69	+0.7
3,082,799	+		Psyr_2608	0.71	-0.6
3,082,856	+		Psyr_2608	0.71	+1.6
3,082,898	+		Psyr_2608	0.71	+1.4
3,082,899	-		Psyr_2608	0.71	-1.6
3,082,899	-		Psyr_2608	0.71	+2.9
3,082,899	-		Psyr_2608	0.71	+0.7
3,083,045	+		Psyr_2608	0.71	+1.4
3,083,046	-		Psyr_2608	0.71	+0.5
3,083,094	+		Psyr_2608	0.72	-0.9
3,083,095	-		Psyr_2608	0.72	-2.3
3,083,095	-		Psyr_2608	0.72	-1.1
3,083,095	-		Psyr_2608	0.72	+0.7
3,083,099	-		Psyr_2608	0.72	+0.4
3,083,444	+		Psyr_2608	0.73	-2.1
3,083,533	+		Psyr_2608	0.73	-1.2
3,083,652	+		Psyr_2608	0.74	-0.6
3,083,652	+		Psyr_2608	0.74	+0.1
3,083,652	+		Psyr_2608	0.74	-1.2
3,083,653	-		Psyr_2608	0.74	+3.9
3,083,653	-		Psyr_2608	0.74	-1.2
3,084,117	-		Psyr_2608	0.75	+0.6
3,084,670	+		Psyr_2608	0.77	+1.6
3,085,678	+		Psyr_2608	0.81	-0.4
3,086,106	+		Psyr_2608	0.82	+2.4
3,086,106	+		Psyr_2608	0.82	+2.0
3,086,108	+		Psyr_2608	0.82	+3.0
3,086,108	+		Psyr_2608	0.82	-0.6
3,086,108	+		Psyr_2608	0.82	+0.8
3,086,108	+		Psyr_2608	0.82	+0.3
3,086,108	+		Psyr_2608	0.82	-1.3
3,086,151	-		Psyr_2608	0.82	+2.9
3,086,531	+		Psyr_2608	0.84	+0.1
3,086,531	+		Psyr_2608	0.84	+2.0
3,086,583	+		Psyr_2608	0.84	-0.4
3,086,890	-		Psyr_2608	0.85	+0.1
3,086,932	-		Psyr_2608	0.85	+0.2
3,087,230	+		Psyr_2608	0.86	-1.8
3,087,230	+		Psyr_2608	0.86	+0.4
3,087,230	+		Psyr_2608	0.86	-0.8
3,087,231	-		Psyr_2608	0.86	+4.7
3,087,231	-		Psyr_2608	0.86	+0.8
3,087,454	+		Psyr_2608	0.87	-1.5
3,087,694	-		Psyr_2608	0.88	-1.3
3,087,856	-		Psyr_2608	0.88	+0.6
3,087,856	-		Psyr_2608	0.88	+0.6
3,089,075	-				-0.8
3,089,378	+				+0.1
3,089,421	-				-1.8
3,089,822	+				+0.8
3,089,823	-				+2.4
3,089,870	+				-0.3
3,090,072	-				+1.4
3,090,082	+				-0.2
3,090,083	-				-0.5
3,090,168	+				+0.1
3,090,257	+				-1.1
3,090,258	-				+0.2
3,090,281	-				-1.2
3,090,281	-				-1.0
3,090,332	+				-2.2
3,090,333	-				-1.0
3,090,494	+				-0.2
3,090,494	+				-1.7
3,090,495	-				-1.7
3,090,956	+				+0.5
3,090,956	+				-0.3
3,090,959	+				-0.6
3,090,997	-				-1.8
3,090,997	-				+0.6
3,091,289	+				+1.7
3,091,571	-				-1.2
3,091,757	+		Psyr_2609	0.24	-1.8
3,092,021	-		Psyr_2609	0.46	+1.6