Experiment: KB with Diallyl sulfide 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3473 and Psyr_3474 are separated by 13 nucleotides Psyr_3474 and Psyr_3475 are separated by 84 nucleotides Psyr_3475 and Psyr_3476 are separated by 46 nucleotides
Psyr_3473: Psyr_3473 - Flagellar P-ring protein, at 4,143,716 to 4,144,825
_3473
Psyr_3474: Psyr_3474 - Flagellar L-ring protein, at 4,144,839 to 4,145,552
_3474
Psyr_3475: Psyr_3475 - Flagellar basal body rod protein:Protein of unknown function DUF1078, at 4,145,637 to 4,146,425
_3475
Psyr_3476: Psyr_3476 - Flagellar basal body rod protein:Protein of unknown function DUF1078, at 4,146,472 to 4,147,212
_3476
Position (kb) 4144
4145
4146 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4143.903 kb on - strand, within Psyr_3473 at 4144.108 kb on - strand, within Psyr_3473 at 4144.261 kb on + strand, within Psyr_3473 at 4144.413 kb on + strand, within Psyr_3473 at 4144.546 kb on - strand, within Psyr_3473 at 4144.546 kb on - strand, within Psyr_3473 at 4144.546 kb on - strand, within Psyr_3473 at 4144.830 kb on - strand at 4144.922 kb on - strand, within Psyr_3474 at 4144.922 kb on - strand, within Psyr_3474 at 4144.922 kb on - strand, within Psyr_3474 at 4144.922 kb on - strand, within Psyr_3474 at 4144.925 kb on + strand, within Psyr_3474 at 4144.925 kb on + strand, within Psyr_3474 at 4144.928 kb on + strand, within Psyr_3474 at 4144.928 kb on + strand, within Psyr_3474 at 4144.928 kb on + strand, within Psyr_3474 at 4144.928 kb on + strand, within Psyr_3474 at 4144.928 kb on + strand, within Psyr_3474 at 4144.928 kb on + strand, within Psyr_3474 at 4144.928 kb on + strand, within Psyr_3474 at 4144.929 kb on - strand, within Psyr_3474 at 4144.929 kb on - strand, within Psyr_3474 at 4144.929 kb on - strand, within Psyr_3474 at 4144.929 kb on - strand, within Psyr_3474 at 4144.949 kb on + strand, within Psyr_3474 at 4145.052 kb on + strand, within Psyr_3474 at 4145.164 kb on + strand, within Psyr_3474 at 4145.301 kb on - strand, within Psyr_3474 at 4145.386 kb on + strand, within Psyr_3474 at 4145.386 kb on + strand, within Psyr_3474 at 4145.386 kb on + strand, within Psyr_3474 at 4145.387 kb on - strand, within Psyr_3474 at 4145.387 kb on - strand, within Psyr_3474 at 4145.387 kb on - strand, within Psyr_3474 at 4145.387 kb on - strand, within Psyr_3474 at 4145.423 kb on + strand, within Psyr_3474 at 4145.423 kb on + strand, within Psyr_3474 at 4145.423 kb on + strand, within Psyr_3474 at 4145.444 kb on - strand, within Psyr_3474 at 4145.540 kb on + strand at 4146.290 kb on - strand, within Psyr_3475 at 4146.409 kb on + strand at 4146.409 kb on + strand at 4146.409 kb on + strand at 4146.409 kb on + strand at 4146.409 kb on + strand at 4146.409 kb on + strand at 4146.410 kb on - strand at 4146.410 kb on - strand at 4146.410 kb on - strand at 4146.410 kb on - strand at 4146.410 kb on - strand at 4146.410 kb on - strand at 4146.410 kb on - strand at 4146.410 kb on - strand at 4146.410 kb on - strand at 4146.410 kb on - strand at 4146.411 kb on + strand at 4146.411 kb on + strand at 4146.411 kb on + strand at 4146.411 kb on + strand at 4146.411 kb on + strand at 4146.412 kb on - strand at 4146.473 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Diallyl sulfide 10 mM remove 4,143,903 - Psyr_3473 0.17 -1.0 4,144,108 - Psyr_3473 0.35 -0.9 4,144,261 + Psyr_3473 0.49 +0.0 4,144,413 + Psyr_3473 0.63 -0.4 4,144,546 - Psyr_3473 0.75 -0.6 4,144,546 - Psyr_3473 0.75 +0.1 4,144,546 - Psyr_3473 0.75 +0.2 4,144,830 - -2.0 4,144,922 - Psyr_3474 0.12 +0.0 4,144,922 - Psyr_3474 0.12 +0.2 4,144,922 - Psyr_3474 0.12 +1.0 4,144,922 - Psyr_3474 0.12 -0.9 4,144,925 + Psyr_3474 0.12 +0.4 4,144,925 + Psyr_3474 0.12 +0.0 4,144,928 + Psyr_3474 0.12 -0.7 4,144,928 + Psyr_3474 0.12 -0.6 4,144,928 + Psyr_3474 0.12 +2.4 4,144,928 + Psyr_3474 0.12 +1.1 4,144,928 + Psyr_3474 0.12 +0.0 4,144,928 + Psyr_3474 0.12 -1.0 4,144,928 + Psyr_3474 0.12 -0.8 4,144,929 - Psyr_3474 0.13 +0.6 4,144,929 - Psyr_3474 0.13 +0.4 4,144,929 - Psyr_3474 0.13 +0.1 4,144,929 - Psyr_3474 0.13 +0.0 4,144,949 + Psyr_3474 0.15 +1.6 4,145,052 + Psyr_3474 0.30 +0.8 4,145,164 + Psyr_3474 0.46 +0.7 4,145,301 - Psyr_3474 0.65 +0.2 4,145,386 + Psyr_3474 0.77 -0.3 4,145,386 + Psyr_3474 0.77 +0.0 4,145,386 + Psyr_3474 0.77 -3.2 4,145,387 - Psyr_3474 0.77 +0.7 4,145,387 - Psyr_3474 0.77 -1.0 4,145,387 - Psyr_3474 0.77 +1.3 4,145,387 - Psyr_3474 0.77 +0.0 4,145,423 + Psyr_3474 0.82 -0.1 4,145,423 + Psyr_3474 0.82 -0.5 4,145,423 + Psyr_3474 0.82 +0.1 4,145,444 - Psyr_3474 0.85 -0.2 4,145,540 + +0.3 4,146,290 - Psyr_3475 0.83 -0.7 4,146,409 + +0.5 4,146,409 + +0.5 4,146,409 + +0.4 4,146,409 + -2.2 4,146,409 + +0.3 4,146,409 + +1.2 4,146,410 - +0.4 4,146,410 - -0.8 4,146,410 - -0.4 4,146,410 - +0.2 4,146,410 - -0.2 4,146,410 - +0.6 4,146,410 - -0.4 4,146,410 - -0.2 4,146,410 - -0.9 4,146,410 - +1.2 4,146,411 + -0.8 4,146,411 + -1.7 4,146,411 + +2.6 4,146,411 + -1.6 4,146,411 + +0.1 4,146,412 - -2.0 4,146,473 + +0.7
Or see this region's nucleotide sequence