Experiment: KB with Chaulmoogric 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0657 and Psyr_0658 are separated by 60 nucleotides Psyr_0658 and Psyr_0659 are separated by 116 nucleotides
Psyr_0657: Psyr_0657 - Drug resistance transporter Bcr/CflA subfamily, at 744,766 to 745,962
_0657
Psyr_0658: Psyr_0658 - Zinc-containing alcohol dehydrogenase superfamily, at 746,023 to 747,036
_0658
Psyr_0659: Psyr_0659 - transcriptional regulator, LysR family, at 747,153 to 748,076
_0659
Position (kb) 746
747
748 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 745.224 kb on + strand, within Psyr_0657 at 745.360 kb on + strand, within Psyr_0657 at 745.438 kb on + strand, within Psyr_0657 at 745.474 kb on + strand, within Psyr_0657 at 745.474 kb on + strand, within Psyr_0657 at 745.474 kb on + strand, within Psyr_0657 at 745.475 kb on - strand, within Psyr_0657 at 745.475 kb on - strand, within Psyr_0657 at 745.557 kb on + strand, within Psyr_0657 at 745.558 kb on - strand, within Psyr_0657 at 745.610 kb on - strand, within Psyr_0657 at 746.038 kb on + strand at 746.225 kb on + strand, within Psyr_0658 at 746.225 kb on + strand, within Psyr_0658 at 746.225 kb on + strand, within Psyr_0658 at 746.225 kb on + strand, within Psyr_0658 at 746.225 kb on + strand, within Psyr_0658 at 746.225 kb on + strand, within Psyr_0658 at 746.225 kb on + strand, within Psyr_0658 at 746.225 kb on + strand, within Psyr_0658 at 746.226 kb on - strand, within Psyr_0658 at 746.226 kb on - strand, within Psyr_0658 at 746.226 kb on - strand, within Psyr_0658 at 746.771 kb on + strand, within Psyr_0658 at 746.772 kb on - strand, within Psyr_0658 at 746.772 kb on - strand, within Psyr_0658 at 746.772 kb on - strand, within Psyr_0658 at 746.772 kb on - strand, within Psyr_0658 at 746.911 kb on + strand, within Psyr_0658 at 747.020 kb on + strand at 747.020 kb on + strand at 747.020 kb on + strand at 747.021 kb on - strand at 747.082 kb on - strand at 747.141 kb on + strand at 747.185 kb on - strand at 747.269 kb on + strand, within Psyr_0659 at 747.666 kb on + strand, within Psyr_0659 at 747.666 kb on + strand, within Psyr_0659 at 747.666 kb on + strand, within Psyr_0659 at 747.667 kb on - strand, within Psyr_0659 at 747.667 kb on - strand, within Psyr_0659 at 747.716 kb on + strand, within Psyr_0659 at 747.716 kb on + strand, within Psyr_0659 at 747.716 kb on + strand, within Psyr_0659 at 747.717 kb on - strand, within Psyr_0659 at 747.717 kb on - strand, within Psyr_0659 at 747.717 kb on - strand, within Psyr_0659 at 747.717 kb on - strand, within Psyr_0659 at 747.717 kb on - strand, within Psyr_0659 at 747.870 kb on + strand, within Psyr_0659 at 747.992 kb on + strand at 747.992 kb on + strand at 748.034 kb on + strand at 748.034 kb on + strand at 748.035 kb on - strand at 748.035 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Chaulmoogric 10 mM remove 745,224 + Psyr_0657 0.38 -1.8 745,360 + Psyr_0657 0.50 +1.1 745,438 + Psyr_0657 0.56 +3.1 745,474 + Psyr_0657 0.59 +0.7 745,474 + Psyr_0657 0.59 -0.6 745,474 + Psyr_0657 0.59 -1.4 745,475 - Psyr_0657 0.59 -0.4 745,475 - Psyr_0657 0.59 -1.1 745,557 + Psyr_0657 0.66 -1.7 745,558 - Psyr_0657 0.66 -1.3 745,610 - Psyr_0657 0.71 -1.2 746,038 + +0.4 746,225 + Psyr_0658 0.20 -0.0 746,225 + Psyr_0658 0.20 -0.3 746,225 + Psyr_0658 0.20 +1.5 746,225 + Psyr_0658 0.20 -0.1 746,225 + Psyr_0658 0.20 -0.9 746,225 + Psyr_0658 0.20 +1.8 746,225 + Psyr_0658 0.20 +1.4 746,225 + Psyr_0658 0.20 +0.1 746,226 - Psyr_0658 0.20 +0.2 746,226 - Psyr_0658 0.20 +0.1 746,226 - Psyr_0658 0.20 -1.0 746,771 + Psyr_0658 0.74 -0.3 746,772 - Psyr_0658 0.74 -0.5 746,772 - Psyr_0658 0.74 +0.5 746,772 - Psyr_0658 0.74 -0.4 746,772 - Psyr_0658 0.74 +0.0 746,911 + Psyr_0658 0.88 -2.1 747,020 + +0.7 747,020 + +0.7 747,020 + +0.2 747,021 - -1.6 747,082 - -0.2 747,141 + +0.5 747,185 - -0.2 747,269 + Psyr_0659 0.13 -1.6 747,666 + Psyr_0659 0.56 +0.9 747,666 + Psyr_0659 0.56 +0.3 747,666 + Psyr_0659 0.56 +0.1 747,667 - Psyr_0659 0.56 +0.4 747,667 - Psyr_0659 0.56 -0.2 747,716 + Psyr_0659 0.61 +1.8 747,716 + Psyr_0659 0.61 +1.2 747,716 + Psyr_0659 0.61 +0.5 747,717 - Psyr_0659 0.61 -0.5 747,717 - Psyr_0659 0.61 -0.8 747,717 - Psyr_0659 0.61 +0.1 747,717 - Psyr_0659 0.61 +0.9 747,717 - Psyr_0659 0.61 +0.8 747,870 + Psyr_0659 0.78 +0.6 747,992 + +1.0 747,992 + -0.0 748,034 + +2.4 748,034 + -0.7 748,035 - -0.0 748,035 - -0.8
Or see this region's nucleotide sequence