Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_959

Experiment: LB control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB control
1,071,647	+				-0.6
1,071,647	+				+0.5
1,071,648	-				+0.4
1,071,648	-				+0.2
1,071,658	+				-0.0
1,071,658	+				-0.5
1,071,659	-				-0.3
1,071,659	-				-1.0
1,071,659	-				+0.3
1,071,659	-				-0.7
1,071,659	-				-0.4
1,071,659	-				-0.3
1,071,701	-				-0.7
1,071,741	+				-0.9
1,071,742	-				+0.6
1,071,861	-		PfGW456L13_958	0.22	-1.5
1,071,939	+		PfGW456L13_958	0.39	-0.2
1,071,939	+		PfGW456L13_958	0.39	-0.2
1,071,939	+		PfGW456L13_958	0.39	-0.2
1,071,939	+		PfGW456L13_958	0.39	+0.2
1,071,939	+		PfGW456L13_958	0.39	+0.0
1,071,939	+		PfGW456L13_958	0.39	-0.4
1,071,939	+		PfGW456L13_958	0.39	+0.9
1,071,939	+		PfGW456L13_958	0.39	-0.4
1,071,939	+		PfGW456L13_958	0.39	+0.3
1,071,940	-		PfGW456L13_958	0.40	+0.1
1,071,940	-		PfGW456L13_958	0.40	-0.1
1,071,940	-		PfGW456L13_958	0.40	+0.4
1,071,940	-		PfGW456L13_958	0.40	+0.1
1,071,940	-		PfGW456L13_958	0.40	-0.4
1,071,940	-		PfGW456L13_958	0.40	-0.2
1,071,940	-		PfGW456L13_958	0.40	+0.8
1,071,940	-		PfGW456L13_958	0.40	-0.3
1,071,940	-		PfGW456L13_958	0.40	-0.7
1,071,940	-		PfGW456L13_958	0.40	-0.2
1,071,940	-		PfGW456L13_958	0.40	-1.1
1,071,940	-		PfGW456L13_958	0.40	-0.5
1,072,094	+		PfGW456L13_958	0.74	-0.9
1,072,094	+		PfGW456L13_958	0.74	+0.7
1,072,095	-		PfGW456L13_958	0.74	+0.4
1,072,096	+		PfGW456L13_958	0.74	+1.4
1,072,096	+		PfGW456L13_958	0.74	+0.2
1,072,096	+		PfGW456L13_958	0.74	-0.4
1,072,097	-		PfGW456L13_958	0.74	+0.8
1,072,097	-		PfGW456L13_958	0.74	+0.6
1,072,097	-		PfGW456L13_958	0.74	+0.1
1,072,097	-		PfGW456L13_958	0.74	+0.3
1,072,097	-		PfGW456L13_958	0.74	+0.7
1,072,105	+		PfGW456L13_958	0.76	-0.1
1,072,106	-		PfGW456L13_958	0.76	-0.5
1,072,106	-		PfGW456L13_958	0.76	+0.6
1,072,153	+		PfGW456L13_958	0.87	+0.1
1,072,153	+		PfGW456L13_958	0.87	-0.2
1,072,154	-		PfGW456L13_958	0.87	+0.4
1,072,154	-		PfGW456L13_958	0.87	+0.3
1,072,253	+				+0.1
1,072,291	+				-0.7
1,072,292	-				+0.0
1,072,292	-				-0.9
1,072,418	+				+0.4
1,072,418	+				+0.7
1,072,418	+				-1.4
1,072,419	-				-1.6
1,072,419	-				-0.8
1,072,419	-				-1.2
1,072,442	-				-1.0
1,072,540	+		PfGW456L13_959	0.10	+0.1
1,072,540	+		PfGW456L13_959	0.10	-1.1
1,072,540	+		PfGW456L13_959	0.10	-1.9
1,072,540	+		PfGW456L13_959	0.10	-0.9
1,072,540	+		PfGW456L13_959	0.10	-0.4
1,072,540	+		PfGW456L13_959	0.10	+0.6
1,072,540	+		PfGW456L13_959	0.10	-2.0
1,072,767	-		PfGW456L13_959	0.20	+1.2
1,072,844	+		PfGW456L13_959	0.24	-0.2
1,072,845	-		PfGW456L13_959	0.24	+1.0
1,072,845	-		PfGW456L13_959	0.24	+1.4
1,072,845	-		PfGW456L13_959	0.24	-0.0
1,072,848	+		PfGW456L13_959	0.24	+0.6
1,072,849	-		PfGW456L13_959	0.24	-1.1
1,072,849	-		PfGW456L13_959	0.24	+0.0
1,072,871	+		PfGW456L13_959	0.25	+0.8
1,073,289	+		PfGW456L13_959	0.44	-1.2
1,073,289	+		PfGW456L13_959	0.44	-2.6
1,073,289	+		PfGW456L13_959	0.44	+0.3
1,073,290	-		PfGW456L13_959	0.44	-0.4
1,073,312	+		PfGW456L13_959	0.45	-0.1
1,073,586	-		PfGW456L13_959	0.57	-0.6
1,073,628	+		PfGW456L13_959	0.58	-0.4
1,073,629	-		PfGW456L13_959	0.59	-0.9
1,073,629	-		PfGW456L13_959	0.59	-2.8
1,073,697	+		PfGW456L13_959	0.62	+0.6
1,073,697	+		PfGW456L13_959	0.62	-0.1
1,073,697	+		PfGW456L13_959	0.62	-0.5
1,073,698	-		PfGW456L13_959	0.62	-0.1
1,073,698	-		PfGW456L13_959	0.62	-0.7
1,073,834	+		PfGW456L13_959	0.68	-2.1
1,073,835	-		PfGW456L13_959	0.68	-0.4
1,073,889	+		PfGW456L13_959	0.70	-0.3
1,073,889	+		PfGW456L13_959	0.70	-0.6
1,073,890	-		PfGW456L13_959	0.70	-0.4
1,073,890	-		PfGW456L13_959	0.70	-0.1
1,073,890	-		PfGW456L13_959	0.70	-0.8
1,074,044	-		PfGW456L13_959	0.77	-1.0
1,074,216	+		PfGW456L13_959	0.84	-0.9
1,074,216	+		PfGW456L13_959	0.84	-1.1
1,074,216	+		PfGW456L13_959	0.84	-0.5
1,074,217	-		PfGW456L13_959	0.85	-1.2
1,074,217	-		PfGW456L13_959	0.85	-0.9
1,074,485	+				+0.5
1,074,564	+				+0.2
1,074,564	+				+0.1
1,074,564	+				+0.9
1,074,564	+				+0.0
1,074,564	+				-1.1
1,074,610	+				-1.1
1,074,610	+				+0.1
1,074,610	+				+0.5
1,074,610	+				-1.0
1,074,611	-				-0.3
1,074,611	-				-1.7
1,074,611	-				+0.5
1,074,709	+		PfGW456L13_960	0.15	+0.5
1,074,727	+		PfGW456L13_960	0.17	-0.9
1,074,832	-		PfGW456L13_960	0.29	+0.1
1,074,832	-		PfGW456L13_960	0.29	-0.8
1,074,861	+		PfGW456L13_960	0.32	-0.4
1,074,880	+		PfGW456L13_960	0.34	+0.3
1,074,880	+		PfGW456L13_960	0.34	+0.1
1,074,880	+		PfGW456L13_960	0.34	+0.2
1,074,881	-		PfGW456L13_960	0.34	-0.6
1,074,883	+		PfGW456L13_960	0.35	+0.7
1,074,883	+		PfGW456L13_960	0.35	-0.4
1,074,883	+		PfGW456L13_960	0.35	-1.8
1,074,883	+		PfGW456L13_960	0.35	-0.4
1,074,883	+		PfGW456L13_960	0.35	-0.5
1,074,883	+		PfGW456L13_960	0.35	+0.1
1,074,883	+		PfGW456L13_960	0.35	-0.3
1,074,883	+		PfGW456L13_960	0.35	+0.0
1,074,883	+		PfGW456L13_960	0.35	+0.5
1,074,883	+		PfGW456L13_960	0.35	-3.3
1,074,883	+		PfGW456L13_960	0.35	-0.0
1,074,884	-		PfGW456L13_960	0.35	-1.3
1,074,884	-		PfGW456L13_960	0.35	-0.3
1,074,884	-		PfGW456L13_960	0.35	+0.8
1,074,884	-		PfGW456L13_960	0.35	-0.4
1,074,884	-		PfGW456L13_960	0.35	+0.9
1,074,884	-		PfGW456L13_960	0.35	+0.0
1,074,884	-		PfGW456L13_960	0.35	+0.9
1,074,884	-		PfGW456L13_960	0.35	-0.1
1,074,884	-		PfGW456L13_960	0.35	-0.4
1,074,986	-		PfGW456L13_960	0.47	-0.2
1,075,016	+		PfGW456L13_960	0.50	-1.0
1,075,017	-		PfGW456L13_960	0.50	-0.2
1,075,112	+		PfGW456L13_960	0.61	+0.1
1,075,137	+		PfGW456L13_960	0.64	-0.1
1,075,137	+		PfGW456L13_960	0.64	+0.4
1,075,138	-		PfGW456L13_960	0.64	+0.5
1,075,138	-		PfGW456L13_960	0.64	+0.8
1,075,223	+		PfGW456L13_960	0.74	-0.3
1,075,369	+				-0.1
1,075,370	-				+0.9
1,075,370	-				+0.3
1,075,370	-				-0.7
1,075,370	-				+0.1
1,075,462	+				-0.8
1,075,518	+				+0.0
1,075,518	+				-0.8
1,075,519	-				-0.6
1,075,536	+				-1.8
1,075,536	+				+0.2
1,075,537	-				-0.5
1,075,560	+				-0.4